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The map label for this gene is ybbR [H]

Identifier: 218901360

GI number: 218901360

Start: 154577

End: 156058

Strand: Direct

Name: ybbR [H]

Synonym: BCAH820_0179

Alternate gene names: 218901360

Gene position: 154577-156058 (Clockwise)

Preceding gene: 218901359

Following gene: 218901361

Centisome position: 2.92

GC content: 36.64

Gene sequence:

>1482_bases
ATGGATAAGTTAATGGAGAATCATTGGTTTTTAAAAGGAATCTCATTACTATTGGCGTGTATGCTTTTTATGTCAGCGAC
TTTAACTGAAAAAAATACGACATCGGGGATATTACCTTTTGCAAATGATGCGAAAGAAACACTAACTAATTATGCTATTA
ACGTTAAGTATGATGAAGAGAAATATATTGTAAGTGGTATTCCGGCAGAGGGCGTTAAGGTGAAGTTAGAGGGTCCAAAA
GCAGCAGTTGCTACAGCAAAGGCGAAAAAACAATTTGATATACCAGTTGATTTGAGAGATAGCGAAAAAGGAACTTATGA
AGTTTCTTTGAAAACGAACGGACTTCCAGATGATGTGAAAGGAACAGTTCAGCCATCAACAATTAAAGTTACTCTTCATG
AAAAGGCGAGAAAATATGTTCATGTAGATCTGAAATTATCAAATGAGGATCAGATGCCAGCGGGGGCTATTCTCGAAAAA
TCAAGCCTTAAACCGGATACTGTTGAGGTAGTTGGGACGAAAGAAGAAATTGAAAGTATTTCATCTGCCAAAGCGTATGT
TGATTTAAAAGGTGTTAATAAAACTGTTACAAAAACGCCCGAAGTTACATTATACAATAAAGAAGGAAAACGTTTAAATG
TAAGAACAAGTCCATCTAAGATTAGTGTAACGTTGAATGTGGCGACGCAAGCTACGGCCAATAATACTGAAAAAACTGTT
CCTATAGCATATACGAAAAAGGGGAGTTTACCGGAAGGATTGGCCGTTACAAATATTAGCGTTGAGCCGAGAGAAGTAAC
GATAGCAGGTCCAAAAGATATATTAGATAATATACAATCGATAGAGGGGGTCGAAGTAGATCTTAGTCAATTGACAGAGT
CTACAACATTCGATACCTCTGTTTTATTACCAAAGGGTGTAACAAGTGCGAAACCAAATCAAGTGAAGGTTTCAGTAGGC
GTACAGAAAACAAAACAAACGAAAACAAGAACGATTGATGGTATATCAATTCAAAAAAATGGACTTTCGAAAGACGTTAC
GGCCCAGTTACTTTCGCCGCAAGATGGGAAGATAAGCGTTGATATTTCAGGAGAAACAAGTATAGTAGATAAAATAACAG
CTAATCAAATAACAGCAGTGATTAATCTACAAAATGTGTCTCCTGGGACGAAGGATGTTGCCATTCAAGTGAGTGGCCCT
AGTAATATTTCAATAGAGCCAAAACAAAAAAGTGCTAAAGTCACAATTGTGAAGAAAGAAAATCCCGATAAAGAAGTACA
GGGTAATGGTGAACAACCAAATTCAAATAATAATCAAGATAATCAAACTGAAAAACCAAAAAATCCTGAACCAGAACCTA
ATCCTGATCCTGATCCGGAAAAGGAGAAGGAACCGGAACAAAATAAAGATAAAGAAACTAGCCAAGAGCCAACAGTAGAT
AATCAAAAAGAGCCAGAAAAAGGAGCGAATCATAATGGGTAA

Upstream 100 bases:

>100_bases
GATTTGAAGACAGAACAACTGAAAGATATGTTGTTAGCTGAATTTAGTGCGAACGAAAAAACGACTTCTTCGTCTTTATG
GAATTGGAGGAGAAAGCGTC

Downstream 100 bases:

>100_bases
ATATTTTGGTACAGATGGAGTACGCGGGGTTGCGAATAAGGAGTTAACACCTGAATTAGCGTTCAAAATTGGACGTTTCG
GTGGTTATGTATTAACAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK
AAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVKGTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEK
SSLKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG
VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKITANQITAVINLQNVSPGTKDVAIQVSGP
SNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEPTVD
NQKEPEKGANHNG

Sequences:

>Translated_493_residues
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK
AAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVKGTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEK
SSLKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG
VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKITANQITAVINLQNVSPGTKDVAIQVSGP
SNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEPTVD
NQKEPEKGANHNG
>Mature_493_residues
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEEKYIVSGIPAEGVKVKLEGPK
AAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVKGTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEK
SSLKPDTVEVVGTKEEIESISSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTSVLLPKGVTSAKPNQVKVSVG
VQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISVDISGETSIVDKITANQITAVINLQNVSPGTKDVAIQVSGP
SNISIEPKQKSAKVTIVKKENPDKEVQGNGEQPNSNNNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEPTVD
NQKEPEKGANHNG

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 53396; Mature: 53396

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCC
KYIVSGIPAEGVKVKLEGPKAAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVK
EEEEECCCCCCEEEEECCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEKSSLKPDTVEVVGTKEEIESI
CCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECHHHHHHH
SSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
HCCEEEEEEECCCCEECCCCCEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCEE
PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTS
EEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEHHHHCCCCCCCCE
VLLPKGVTSAKPNQVKVSVGVQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISV
EECCCCCCCCCCCEEEEEECCCCCCCCHHEEECCEEEECCCCCCCHHHHHCCCCCCEEEE
DISGETSIVDKITANQITAVINLQNVSPGTKDVAIQVSGPSNISIEPKQKSAKVTIVKKE
EECCCCHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEECCCCCCCEEEEEECC
NPDKEVQGNGEQPNSNNNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEPTVD
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQKEPEKGANHNG
CCCCCCCCCCCCC
>Mature Secondary Structure
MDKLMENHWFLKGISLLLACMLFMSATLTEKNTTSGILPFANDAKETLTNYAINVKYDEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCC
KYIVSGIPAEGVKVKLEGPKAAVATAKAKKQFDIPVDLRDSEKGTYEVSLKTNGLPDDVK
EEEEECCCCCCEEEEECCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
GTVQPSTIKVTLHEKARKYVHVDLKLSNEDQMPAGAILEKSSLKPDTVEVVGTKEEIESI
CCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECHHHHHHH
SSAKAYVDLKGVNKTVTKTPEVTLYNKEGKRLNVRTSPSKISVTLNVATQATANNTEKTV
HCCEEEEEEECCCCEECCCCCEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCEE
PIAYTKKGSLPEGLAVTNISVEPREVTIAGPKDILDNIQSIEGVEVDLSQLTESTTFDTS
EEEEECCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHCCCCEEEHHHHCCCCCCCCE
VLLPKGVTSAKPNQVKVSVGVQKTKQTKTRTIDGISIQKNGLSKDVTAQLLSPQDGKISV
EECCCCCCCCCCCEEEEEECCCCCCCCHHEEECCEEEECCCCCCCHHHHHCCCCCCEEEE
DISGETSIVDKITANQITAVINLQNVSPGTKDVAIQVSGPSNISIEPKQKSAKVTIVKKE
EECCCCHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEECCCCCCCEEEEEECC
NPDKEVQGNGEQPNSNNNQDNQTEKPKNPEPEPNPDPDPEKEKEPEQNKDKETSQEPTVD
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQKEPEKGANHNG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]