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The map label for this gene is 218884784

Identifier: 218884784

GI number: 218884784

Start: 1363281

End: 1363931

Strand: Direct

Name: 218884784

Synonym: DKAM_1473

Alternate gene names: NA

Gene position: 1363281-1363931 (Clockwise)

Preceding gene: 218884779

Following gene: 218884785

Centisome position: 99.86

GC content: 54.53

Gene sequence:

>651_bases
ATGTTGGAGAGGTTGTTGAAGCCTAGGGAGTTCTGCGAGATTGTTGGGATTAGCTACAGGACTTTTAAGCGGTGGGTCTC
TGAAGGCAGAGTGAGCGTCGTGCGAACGCCTAGTGGCAGGATGAGAGTACCGTACTCCGAGGTAGAGCGCATCCTTGGAG
GGAGGCCGGAAGCCAGAGAAGTAAGGGCAGTAGTATATGCCCGCGTGAGCTCCAGCGACCAGAGGAGCGACCTCGAGAGG
CAAGTGCAGTACCTCACCCAGTACTGCTCTGCTAGGGGCTACAGAGTAGTCGACGTCCTAACAGACATCGCCAGCGGGCT
GAAGGCAGACCGCAGAGGGCTGCTCAAGCTCTTCGAATACGTCGTCAGTAAACAAGTAGACGTCGTGGTTATTACATACA
GGGACAGGCTGACCAGGTTCGGCTTCGAGTACCTAGAGTACTTCTTCAGGCAGTACGGCGTTAGGATAGAGGTCATCTAT
GGTGATGAGCCCAAGGACGCGCGCCAGGAGCTTGTGGAGGATCTACTATCGATAGTCACCTCATTTGCTGGCAAGCTCTA
CGGGCTTAGAAGCCACAGAAAAAAGAGGCTCGTTGAGGGCTTCAAAAAGCTAGTGGAAGAGGTCGAAAAGGGCGGTGGCG
AGAGTAGCTAG

Upstream 100 bases:

>100_bases
AAGGTGAATCCAGGCACCAAGATATATTGGAAAACCCTATAAGAGGGGCAGAAACGTTTATTAAGGTCATTGAGGAAATT
TTATAGACAGTTGAGGTCGA

Downstream 100 bases:

>100_bases
AACCATTGTAGTCGAGACGCCGCCCATTCCAAGGAGGCTCTTCAGGGTCTTCGCCGAGCTAGAGGGCATGTACCGGAACA
TGGTCGAGCAACTAGTGTTA

Product: IS element ISDka1 orfA resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLERLLKPREFCEIVGISYRTFKRWVSEGRVSVVRTPSGRMRVPYSEVERILGGRPEAREVRAVVYARVSSSDQRSDLER
QVQYLTQYCSARGYRVVDVLTDIASGLKADRRGLLKLFEYVVSKQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVIY
GDEPKDARQELVEDLLSIVTSFAGKLYGLRSHRKKRLVEGFKKLVEEVEKGGGESS

Sequences:

>Translated_216_residues
MLERLLKPREFCEIVGISYRTFKRWVSEGRVSVVRTPSGRMRVPYSEVERILGGRPEAREVRAVVYARVSSSDQRSDLER
QVQYLTQYCSARGYRVVDVLTDIASGLKADRRGLLKLFEYVVSKQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVIY
GDEPKDARQELVEDLLSIVTSFAGKLYGLRSHRKKRLVEGFKKLVEEVEKGGGESS
>Mature_216_residues
MLERLLKPREFCEIVGISYRTFKRWVSEGRVSVVRTPSGRMRVPYSEVERILGGRPEAREVRAVVYARVSSSDQRSDLER
QVQYLTQYCSARGYRVVDVLTDIASGLKADRRGLLKLFEYVVSKQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVIY
GDEPKDARQELVEDLLSIVTSFAGKLYGLRSHRKKRLVEGFKKLVEEVEKGGGESS

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 25083; Mature: 25083

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERLLKPREFCEIVGISYRTFKRWVSEGRVSVVRTPSGRMRVPYSEVERILGGRPEARE
CCHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHCCCCCHHH
VRAVVYARVSSSDQRSDLERQVQYLTQYCSARGYRVVDVLTDIASGLKADRRGLLKLFEY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSKQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVIYGDEPKDARQELVEDLLSIVT
HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH
SFAGKLYGLRSHRKKRLVEGFKKLVEEVEKGGGESS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLERLLKPREFCEIVGISYRTFKRWVSEGRVSVVRTPSGRMRVPYSEVERILGGRPEARE
CCHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHCCCCCHHH
VRAVVYARVSSSDQRSDLERQVQYLTQYCSARGYRVVDVLTDIASGLKADRRGLLKLFEY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSKQVDVVVITYRDRLTRFGFEYLEYFFRQYGVRIEVIYGDEPKDARQELVEDLLSIVT
HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH
SFAGKLYGLRSHRKKRLVEGFKKLVEEVEKGGGESS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]