| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884506
Identifier: 218884506
GI number: 218884506
Start: 1113069
End: 1113350
Strand: Direct
Name: 218884506
Synonym: DKAM_1195
Alternate gene names: NA
Gene position: 1113069-1113350 (Clockwise)
Preceding gene: 218884505
Following gene: 218884511
Centisome position: 81.53
GC content: 62.06
Gene sequence:
>282_bases GTGAAGCTCGTGTTCTACAAGCCGTGTCACACCATCTCCCTTCTCGCGGTCAAGGTAGAGGTATACGAGGCCGGTGACCG GGGTTTGCCCGAGGTCCTTGCTGCGCTCTTCCCGGTGACGGAGTTCCCCCCCACCGTGCAGGGACCTACTCCCGGCAACC CCACTAGCTCCCCCTACGACTCGGGTATCCTGCCCCCGTACTCCTCCACGATAACAGACGCGAGCTCCTTCAACTGCTTG GCTCTCACCCTGTACAGCCCGAGGGGTCTAAGGGCCTTCTGA
Upstream 100 bases:
>100_bases ACGGGCCCCTGGATAAAAATTACTTTATGGAAGGGTATTTAATACTATGTCACTCAACCATTCCTTACTTTCTGGATGAC TGGGCTCGTAGGCGGGGGAG
Downstream 100 bases:
>100_bases ACCTCCTCCGGGGTGCTCTTTACAACGACTCCACGTCCGTGAACCTCTCAACGAGGGCTTGGAAGACCCTGGACGCTGCT GCTCGAGTGGTCCTCCTGAG
Product: putative EndoIII-related endonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYDSGILPPYSSTITDASSFNCL ALTLYSPRGLRAF
Sequences:
>Translated_93_residues MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYDSGILPPYSSTITDASSFNCL ALTLYSPRGLRAF >Mature_93_residues MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYDSGILPPYSSTITDASSFNCL ALTLYSPRGLRAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9992; Mature: 9992
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYD CCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SGILPPYSSTITDASSFNCLALTLYSPRGLRAF CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MKLVFYKPCHTISLLAVKVEVYEAGDRGLPEVLAALFPVTEFPPTVQGPTPGNPTSSPYD CCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SGILPPYSSTITDASSFNCLALTLYSPRGLRAF CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA