| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884494
Identifier: 218884494
GI number: 218884494
Start: 1104683
End: 1104955
Strand: Direct
Name: 218884494
Synonym: DKAM_1183
Alternate gene names: NA
Gene position: 1104683-1104955 (Clockwise)
Preceding gene: 218884492
Following gene: 218884496
Centisome position: 80.92
GC content: 50.92
Gene sequence:
>273_bases GTGCCAGCATTGACAATATATTGGGAGAGATGTGATGTATGCGGCTACTACAGACCTGTTAAACAATGCACTCTATTCCA GAACCTACTAGTTGATGCCGTGTGCTGTATATCATGCCCGAAGAGGAGCGAGTGCCCTAGACCGGTTTGGCGTGTTGAAG CCGTTCTAGAGAAGCCTGCTCAACCAAGACTTGCCAGCCCCGAGGAGCGTAGGAGGCTGTTAATGGAGCTACTTGGTAAA TTAAGCAGTGAGAGCAGGACGCCCTCAGCCTAG
Upstream 100 bases:
>100_bases TTAAAATCTTCAACACGGTTGAAACCACCTTAAACCAGCTAGAATAACGTATTTTACGTCATCATTATAATATTTTCATA AGCTATTATTAAACTCAGGG
Downstream 100 bases:
>100_bases ATAACCCCCTCTAACCAGCTAGCCTACTCTTGGGACAACCCAGTATATTAGTTGGCCTCCCCCAGCTAGCTCATACTCTA CTTTCACTGGTTTATCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MPALTIYWERCDVCGYYRPVKQCTLFQNLLVDAVCCISCPKRSECPRPVWRVEAVLEKPAQPRLASPEERRRLLMELLGK LSSESRTPSA
Sequences:
>Translated_90_residues MPALTIYWERCDVCGYYRPVKQCTLFQNLLVDAVCCISCPKRSECPRPVWRVEAVLEKPAQPRLASPEERRRLLMELLGK LSSESRTPSA >Mature_89_residues PALTIYWERCDVCGYYRPVKQCTLFQNLLVDAVCCISCPKRSECPRPVWRVEAVLEKPAQPRLASPEERRRLLMELLGKL SSESRTPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10340; Mature: 10209
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 7.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALTIYWERCDVCGYYRPVKQCTLFQNLLVDAVCCISCPKRSECPRPVWRVEAVLEKPA CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC QPRLASPEERRRLLMELLGKLSSESRTPSA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PALTIYWERCDVCGYYRPVKQCTLFQNLLVDAVCCISCPKRSECPRPVWRVEAVLEKPA CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC QPRLASPEERRRLLMELLGKLSSESRTPSA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA