| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is sfsA [H]
Identifier: 218884443
GI number: 218884443
Start: 1065024
End: 1065749
Strand: Direct
Name: sfsA [H]
Synonym: DKAM_1132
Alternate gene names: 218884443
Gene position: 1065024-1065749 (Clockwise)
Preceding gene: 218884442
Following gene: 218884449
Centisome position: 78.01
GC content: 46.28
Gene sequence:
>726_bases GTGTACCCTCTTCTAACACTCGACCCCAGTAAGATATTCGAGTGCACCATAATTAAACGGCTCAACCGCTTCACAGTGTT AGTCGAAGCCGGTGATGGATTGATCCAGGCACACCTCAACAACACCGGCAGGCTATATGGAATACTCGAACCCGGGAGGC GGGGCGTGCTCATAAATATAAATGGTGTCAAGCTCAGGCACAGGCTTCTAGGTGTCTACAATAATGAGGAAGTAATCCTA TTGGATACCAGTATCCAGGAAAAAGCGTTTCTGAAGGCAGCCGAGTCAGGGTTGATACCATGGTTGAACCCCTGTAGCCT TATTAAGAGAAACATAAGGATTAATCAGGCTGTGATAGACTTCCTGTTTAAATGCGGGAACACCATGGTATTCATTGAGT TAAAGAGCGCCGTGATGAATCTAAACGGTTATTCCGGGTATCCGGATGCACCCACTGAGCGAGGTAGGAGACAGATAAGG GTTCTCAGCGAGCTAGCCTCAACAAGTGTTAAATCAATAGTTGTGTTCGTGTCCAGTGTACCAGGTGCAAGAGGCTTTAA GCTGTATTGCGGTTTCGATAAGGAAATAGGAAGGGTTGTCCGGGATGCTGTAGCTAAAGGAGTATTGTTTAAGGCTGTGT CGATAAGCTTTAACCACTCAACCTACAGCATAGCGCTTGAAAACCCGGATTTAACAGTGGATCTTTGGAGTATGTGTGAA GAGTAG
Upstream 100 bases:
>100_bases TCCCCTGACATCGGGCAGGTAACAATACTAGCACTAATTATTCTCTGGCGGAAAGAGCTCCTCGGATTATTACAGGGGAA AACTACGGGGGGAGAAAATA
Downstream 100 bases:
>100_bases ATTTAAGCTACATCTAGTACTAGTTGCCCTAAGTGTCCTCCCTTCTTTAACTCTATTAATGCCTCATTGGCCTCGCTAAG CCTATAGGTTTTCACTTCAG
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLININGVKLRHRLLGVYNNEEVIL LDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVIDFLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIR VLSELASTSVKSIVVFVSSVPGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE E
Sequences:
>Translated_241_residues MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLININGVKLRHRLLGVYNNEEVIL LDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVIDFLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIR VLSELASTSVKSIVVFVSSVPGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE E >Mature_241_residues MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLININGVKLRHRLLGVYNNEEVIL LDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVIDFLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIR VLSELASTSVKSIVVFVSSVPGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE E
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 26851; Mature: 26851
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLINI CCCEEECCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEE NGVKLRHRLLGVYNNEEVILLDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVID CCEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHH FLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIRVLSELASTSVKSIVVFVSSV HHHHCCCEEEEEEEEHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECC PGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE CCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEEEEECCCCCEEEHHHHCC E C >Mature Secondary Structure MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLINI CCCEEECCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEE NGVKLRHRLLGVYNNEEVILLDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVID CCEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHH FLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIRVLSELASTSVKSIVVFVSSV HHHHCCCEEEEEEEEHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECC PGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE CCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEEEEECCCCCEEEHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA