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The map label for this gene is 218884385

Identifier: 218884385

GI number: 218884385

Start: 1018667

End: 1019098

Strand: Direct

Name: 218884385

Synonym: DKAM_1074

Alternate gene names: NA

Gene position: 1018667-1019098 (Clockwise)

Preceding gene: 218884384

Following gene: 218884388

Centisome position: 74.62

GC content: 41.9

Gene sequence:

>432_bases
GTGGAGTCAGGTACTGTCAGGGAAGATGAAATACCAGTGATGAGGATACTCATGGATCTAGAGGAAGAGTTAAAGTTTCT
TAAGAAAGGAGAGTATGTCCGTTCCTTTAGGATCAGTAACCAGGTAATAGTAATGCTTAGAAACGGCTTTGAACCCGGCG
AAATAAGCGAGCTGGAGAGAGAACTCTCACAGAAGCTAGGGGACAGGGTTAAAGTAGTTATTGAGACAGGCGACGTCAAG
CGATTAATAGAACAACTAATTGCTCCAGCATCACTGATAGGTGTAAACCAGGTATGGCTACCAAGCGGCAGTGAAATGCT
TAATGTTAGAGTATCAAAGAGAGATAGAAGGATATTAGGGAGAAACAGGGAGGAATATGAGAAACTATTATCAAGCCTGC
TCGGTGTTGAAACCCGAATAATTTTTGAATAA

Upstream 100 bases:

>100_bases
TAGAGGCAGAGCAATGAAACGGTGATGATGAGGCTTGAAGTACCCACTCGACAGGATATGTGTGAAGAGTGGCGTGCTCT
GTGCCAGCTGCCAAAGGAAG

Downstream 100 bases:

>100_bases
ATCTAGCTTAAGACTAGCTTCTCCTTAAATAACTCCCTCAGTACAATCGTAGCGTATAACCCAGGTTCCAACATAAACAC
TAATCTACATACATCACCAG

Product: putative transcription elongation factor, nusA

Products: NA

Alternate protein names: Transcription Elongation Factor NusA; Transcription Elongation Factor

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MESGTVREDEIPVMRILMDLEEELKFLKKGEYVRSFRISNQVIVMLRNGFEPGEISELERELSQKLGDRVKVVIETGDVK
RLIEQLIAPASLIGVNQVWLPSGSEMLNVRVSKRDRRILGRNREEYEKLLSSLLGVETRIIFE

Sequences:

>Translated_143_residues
MESGTVREDEIPVMRILMDLEEELKFLKKGEYVRSFRISNQVIVMLRNGFEPGEISELERELSQKLGDRVKVVIETGDVK
RLIEQLIAPASLIGVNQVWLPSGSEMLNVRVSKRDRRILGRNREEYEKLLSSLLGVETRIIFE
>Mature_143_residues
MESGTVREDEIPVMRILMDLEEELKFLKKGEYVRSFRISNQVIVMLRNGFEPGEISELERELSQKLGDRVKVVIETGDVK
RLIEQLIAPASLIGVNQVWLPSGSEMLNVRVSKRDRRILGRNREEYEKLLSSLLGVETRIIFE

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16530; Mature: 16530

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESGTVREDEIPVMRILMDLEEELKFLKKGEYVRSFRISNQVIVMLRNGFEPGEISELER
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCCCCHHHHHH
ELSQKLGDRVKVVIETGDVKRLIEQLIAPASLIGVNQVWLPSGSEMLNVRVSKRDRRILG
HHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHCCCEEECCCCCCEEEEEECHHHHHHHC
RNREEYEKLLSSLLGVETRIIFE
CCHHHHHHHHHHHHCCHHEEEEC
>Mature Secondary Structure
MESGTVREDEIPVMRILMDLEEELKFLKKGEYVRSFRISNQVIVMLRNGFEPGEISELER
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCCCCHHHHHH
ELSQKLGDRVKVVIETGDVKRLIEQLIAPASLIGVNQVWLPSGSEMLNVRVSKRDRRILG
HHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHCCCEEECCCCCCEEEEEECHHHHHHHC
RNREEYEKLLSSLLGVETRIIFE
CCHHHHHHHHHHHHCCHHEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA