Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884289
Identifier: 218884289
GI number: 218884289
Start: 924766
End: 925584
Strand: Direct
Name: 218884289
Synonym: DKAM_0978
Alternate gene names: NA
Gene position: 924766-925584 (Clockwise)
Preceding gene: 218884287
Following gene: 218884291
Centisome position: 67.74
GC content: 44.44
Gene sequence:
>819_bases ATGGTGGGCACTATGAGTAACAGGATTATCGCCTTGATGACTGACTTCGGGTATAAGGATCCATATGTAGGCGTGATGAA GGGAGTTATAAAAAGTATCAACCCGGATGTTGAAATAGTGGATTTAACCCATGGCATAAATCGCCATGACATTATTGAGG CAGCTGTAGTACTCATGGTTTCAGCCAGGTATTTCCCTCCGGGCACAATATTCGTGGTTGTCGTGGATCCAGGCGTCGGC AGTAACAGGCGGGCTATAGTAGTGGAGACAAGTAATTACATACTTGTTGGACCAGATAACGGATGCCTAAGCCTCCTGGC ATTAAAAGATGGAGTTAAGAGGGTGGTTGACATCTCTAACTCCAGGTACAGGTTGGGCGATGTATCACATACGTTCCATG GACGCGACATCTTCGCCCCTGTGGCAGCATGGATTAGCCGTGGTATACCACTCGAGGCGATCGGTACCGAGATACCTGTT GACTCATTGAAAACAATCAGAATTGAACCTCCTAGAATCAGTGATGATTTGATCGAGGGATATGCACTCTATATTGATAT CTATGGTAACGTAATGACAAACATCAATGAGGATGAAGCATGCTCTATTCTTAAGCTTGGTGATAAAGTAGAGATAATAC ATCAAGGAGGAAAAAGCCAATGCGTGTTTACAACAAGTTTCAGCATCGTTAACCCAGGCGAGGTGGCCTGCTATATTAAT TCATGGGGATACCTGGAGATAGCGGTGAATAATGGAAGCGCTGCAGATGTATTTGGCATCATACAGGGCTCAAGGCTCTT TTTCAAAAAACTATCATAG
Upstream 100 bases:
>100_bases TGAAGTGCAGCGGATAAACTGATCTATGCAGTGATGAATACTGTGTCCGAGGGCTCTCGCATAGGATAATTATATGGCCA CTTCATAATGGTTTAGCCAC
Downstream 100 bases:
>100_bases CTCAACCATGGGGTTCAGGTCTCACATAGGTTTATTTAAATTGGTTTCATCACTTCATCCTTGTTCCCCCTGTATACTGC TTGGGCTTGCATTTGGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MVGTMSNRIIALMTDFGYKDPYVGVMKGVIKSINPDVEIVDLTHGINRHDIIEAAVVLMVSARYFPPGTIFVVVVDPGVG SNRRAIVVETSNYILVGPDNGCLSLLALKDGVKRVVDISNSRYRLGDVSHTFHGRDIFAPVAAWISRGIPLEAIGTEIPV DSLKTIRIEPPRISDDLIEGYALYIDIYGNVMTNINEDEACSILKLGDKVEIIHQGGKSQCVFTTSFSIVNPGEVACYIN SWGYLEIAVNNGSAADVFGIIQGSRLFFKKLS
Sequences:
>Translated_272_residues MVGTMSNRIIALMTDFGYKDPYVGVMKGVIKSINPDVEIVDLTHGINRHDIIEAAVVLMVSARYFPPGTIFVVVVDPGVG SNRRAIVVETSNYILVGPDNGCLSLLALKDGVKRVVDISNSRYRLGDVSHTFHGRDIFAPVAAWISRGIPLEAIGTEIPV DSLKTIRIEPPRISDDLIEGYALYIDIYGNVMTNINEDEACSILKLGDKVEIIHQGGKSQCVFTTSFSIVNPGEVACYIN SWGYLEIAVNNGSAADVFGIIQGSRLFFKKLS >Mature_272_residues MVGTMSNRIIALMTDFGYKDPYVGVMKGVIKSINPDVEIVDLTHGINRHDIIEAAVVLMVSARYFPPGTIFVVVVDPGVG SNRRAIVVETSNYILVGPDNGCLSLLALKDGVKRVVDISNSRYRLGDVSHTFHGRDIFAPVAAWISRGIPLEAIGTEIPV DSLKTIRIEPPRISDDLIEGYALYIDIYGNVMTNINEDEACSILKLGDKVEIIHQGGKSQCVFTTSFSIVNPGEVACYIN SWGYLEIAVNNGSAADVFGIIQGSRLFFKKLS
Specific function: Unknown
COG id: COG1912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002747 - InterPro: IPR023227 - InterPro: IPR023228 [H]
Pfam domain/function: PF01887 DUF62 [H]
EC number: NA
Molecular weight: Translated: 29638; Mature: 29638
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGTMSNRIIALMTDFGYKDPYVGVMKGVIKSINPDVEIVDLTHGINRHDIIEAAVVLMV CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH SARYFPPGTIFVVVVDPGVGSNRRAIVVETSNYILVGPDNGCLSLLALKDGVKRVVDISN HCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEECCCCCCEEEEEHHHHHHHHHCCCC SRYRLGDVSHTFHGRDIFAPVAAWISRGIPLEAIGTEIPVDSLKTIRIEPPRISDDLIEG CEEEECCCCEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCCCCHHHHCC YALYIDIYGNVMTNINEDEACSILKLGDKVEIIHQGGKSQCVFTTSFSIVNPGEVACYIN EEEEEEEECCEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEEECCCEEEEEEE SWGYLEIAVNNGSAADVFGIIQGSRLFFKKLS CCCEEEEEECCCCCCEEEEEEECCEEEEEECC >Mature Secondary Structure MVGTMSNRIIALMTDFGYKDPYVGVMKGVIKSINPDVEIVDLTHGINRHDIIEAAVVLMV CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH SARYFPPGTIFVVVVDPGVGSNRRAIVVETSNYILVGPDNGCLSLLALKDGVKRVVDISN HCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEECCCCCCEEEEEHHHHHHHHHCCCC SRYRLGDVSHTFHGRDIFAPVAAWISRGIPLEAIGTEIPVDSLKTIRIEPPRISDDLIEG CEEEECCCCEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCCCCHHHHCC YALYIDIYGNVMTNINEDEACSILKLGDKVEIIHQGGKSQCVFTTSFSIVNPGEVACYIN EEEEEEEECCEECCCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEEECCCEEEEEEE SWGYLEIAVNNGSAADVFGIIQGSRLFFKKLS CCCEEEEEECCCCCCEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]