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The map label for this gene is 218884124

Identifier: 218884124

GI number: 218884124

Start: 781557

End: 782447

Strand: Reverse

Name: 218884124

Synonym: DKAM_0813

Alternate gene names: NA

Gene position: 782447-781557 (Counterclockwise)

Preceding gene: 218884125

Following gene: 218884123

Centisome position: 57.31

GC content: 44.44

Gene sequence:

>891_bases
TTGTCTAGAAACAGGGGTACAGGGGACATCGCTGAAGAAGTCTCTAGAACCCTGAGGAAAGCTGGTTTCCGGGTCGAGTT
TCTTTCATACCCTACCTCAGCTAGAAGCATCGATATCATTGCGTGTAGAGGCGATACCAGGGTTTTCATAAAGGTTTCGC
AGGATTTAAGGGAGGTCTCCTGGATAGAGGTAAATGACTTAAAGAAATCAGGGATAGTGTATGGTTCGAACACTATTATA
GTGGCTGAGAAAAACGGTAGGCGGGAGCTTGAGGATGATGTAGTATATGTTAGGAACGGCGTCAACATCGTTACTACGAA
TCTTCTCGGCAACTATTTATTGAGGAACAGTAAGCCTATTGTTGTAAACATTAGAGGAAACTACCTCTTGAAGATTTCTG
CTGGAAAATTCCAAGTGAAAATGAAGGAAGTAGGGCTCACAAGGGGCGAGTTAGCGGAGCTACTTGGAGTAAGCAGAAAA
GCTGTCTATATGTATGAAAGAGGTGAGCTAATGGTATCGCTTCAAAGAGCTGTGGAATTAGCCAGGATAATGGGGGAGGA
CATATTTGAGGAGATAGATATACTCGGAGACAAGCCCCCGGAGCCTTATGCAGGTACGCTGGAAAACGAGTACTTGCCGG
GCGATGAAATAGAGGCAGCCCTGTGGAGGCTCCTAGATAGACTCGGAGACCTCATAGTAAAATTATCTAGAACTCCAGTG
GATATTGTTGTGAAAGGTGGAAACGTGATAACTGTGACCAGGCTGGATATGGCTGAGAATAAGGCTGAGAAACTAGAGAA
CGCTGAGAAACTAGTGAAGACAACTGGTTCCAAGCTCGTAGTTATTAGAACGAAAAACGACCTAAAAGAAATCCGTGACG
TACATTTGTAA

Upstream 100 bases:

>100_bases
TGCAATGATATACAGTATATACAGGAGAAAGTAGCTTAGACATGGAAAATAAATTCCCTTTTAAACATGTTTAAACATAA
TTTAGAAAACGGGGTCTGTT

Downstream 100 bases:

>100_bases
AGCATGGAGAAGGATAAAGAAGTCAGGCCCAGGTTGAGTGGCACGATGCATATTTAAACCCATCAATCTATGGGCTTCCA
TGGATCACTAGCCAGGTTCT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSRNRGTGDIAEEVSRTLRKAGFRVEFLSYPTSARSIDIIACRGDTRVFIKVSQDLREVSWIEVNDLKKSGIVYGSNTII
VAEKNGRRELEDDVVYVRNGVNIVTTNLLGNYLLRNSKPIVVNIRGNYLLKISAGKFQVKMKEVGLTRGELAELLGVSRK
AVYMYERGELMVSLQRAVELARIMGEDIFEEIDILGDKPPEPYAGTLENEYLPGDEIEAALWRLLDRLGDLIVKLSRTPV
DIVVKGGNVITVTRLDMAENKAEKLENAEKLVKTTGSKLVVIRTKNDLKEIRDVHL

Sequences:

>Translated_296_residues
MSRNRGTGDIAEEVSRTLRKAGFRVEFLSYPTSARSIDIIACRGDTRVFIKVSQDLREVSWIEVNDLKKSGIVYGSNTII
VAEKNGRRELEDDVVYVRNGVNIVTTNLLGNYLLRNSKPIVVNIRGNYLLKISAGKFQVKMKEVGLTRGELAELLGVSRK
AVYMYERGELMVSLQRAVELARIMGEDIFEEIDILGDKPPEPYAGTLENEYLPGDEIEAALWRLLDRLGDLIVKLSRTPV
DIVVKGGNVITVTRLDMAENKAEKLENAEKLVKTTGSKLVVIRTKNDLKEIRDVHL
>Mature_295_residues
SRNRGTGDIAEEVSRTLRKAGFRVEFLSYPTSARSIDIIACRGDTRVFIKVSQDLREVSWIEVNDLKKSGIVYGSNTIIV
AEKNGRRELEDDVVYVRNGVNIVTTNLLGNYLLRNSKPIVVNIRGNYLLKISAGKFQVKMKEVGLTRGELAELLGVSRKA
VYMYERGELMVSLQRAVELARIMGEDIFEEIDILGDKPPEPYAGTLENEYLPGDEIEAALWRLLDRLGDLIVKLSRTPVD
IVVKGGNVITVTRLDMAENKAEKLENAEKLVKTTGSKLVVIRTKNDLKEIRDVHL

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 33234; Mature: 33103

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNRGTGDIAEEVSRTLRKAGFRVEFLSYPTSARSIDIIACRGDTRVFIKVSQDLREVS
CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHCC
WIEVNDLKKSGIVYGSNTIIVAEKNGRRELEDDVVYVRNGVNIVTTNLLGNYLLRNSKPI
EEEEECCCCCCEEECCCEEEEEECCCCCCCCCCEEEEECCCEEEEHHHHHHHHHCCCCCE
VVNIRGNYLLKISAGKFQVKMKEVGLTRGELAELLGVSRKAVYMYERGELMVSLQRAVEL
EEEECCCEEEEEECCCEEEEHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH
ARIMGEDIFEEIDILGDKPPEPYAGTLENEYLPGDEIEAALWRLLDRLGDLIVKLSRTPV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCE
DIVVKGGNVITVTRLDMAENKAEKLENAEKLVKTTGSKLVVIRTKNDLKEIRDVHL
EEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCC
>Mature Secondary Structure 
SRNRGTGDIAEEVSRTLRKAGFRVEFLSYPTSARSIDIIACRGDTRVFIKVSQDLREVS
CCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHCC
WIEVNDLKKSGIVYGSNTIIVAEKNGRRELEDDVVYVRNGVNIVTTNLLGNYLLRNSKPI
EEEEECCCCCCEEECCCEEEEEECCCCCCCCCCEEEEECCCEEEEHHHHHHHHHCCCCCE
VVNIRGNYLLKISAGKFQVKMKEVGLTRGELAELLGVSRKAVYMYERGELMVSLQRAVEL
EEEECCCEEEEEECCCEEEEHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH
ARIMGEDIFEEIDILGDKPPEPYAGTLENEYLPGDEIEAALWRLLDRLGDLIVKLSRTPV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCE
DIVVKGGNVITVTRLDMAENKAEKLENAEKLVKTTGSKLVVIRTKNDLKEIRDVHL
EEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA