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The map label for this gene is 218884117

Identifier: 218884117

GI number: 218884117

Start: 776372

End: 777517

Strand: Reverse

Name: 218884117

Synonym: DKAM_0806

Alternate gene names: NA

Gene position: 777517-776372 (Counterclockwise)

Preceding gene: 218884120

Following gene: 218884112

Centisome position: 56.95

GC content: 45.29

Gene sequence:

>1146_bases
ATGAGCAAAGTCTCCAAGTATTATGCAGCATTAAGGAGTAAAATCATGGATGAGGTATCAACAATTCTCAACGATGGGGA
GAAGAAAGCATCCCTTAGAGACCCTCATTCAAAACGGGCTCCGAGACCCTGCGGCTTAACAATACACACTGGTATTGGGT
GTACAATGGGGTGTTCATACTGCTACATAGGTGACATGGGGTTTCCAACGAACTCGATAAAGCCGTATCCTTTAAGTGGT
GTGCAGCTAGTCTACGCGTTGCTTAATAATAAATACTTCCTCCCAGGTGAAAGGGGAACCCTGATCGCTATTGGTAGTGT
AACAGAACCGTTTCACCCGGCAGTCCTCGTGAAGACCCTTGAATATATCTGGGCTGTGAAAAAGTATCTGGGCAACTATA
TTCAGTTCTCCACGAAAGCCTATATATCAATGAATACGGCTCTTAAAGTAGCTGCAATAGACCCAGGTATATCGCCATTG
ATCACCCTAGTCTCGATCAACTACTCTAGCGAGCTGGAGAGGAATGCACCTAGACCAGAGATCAGGCTTGAATCGATAAG
AAATCTCAGGGAGGCAGGATTAAAGCCGATATTGTTCCTGAGACCCATAATACCGGGGATAACCGATAAAGAATATGTAG
AGATCATAGATAAGGCAGCCGAATACGGGGCAGTAGGGGTTGTTGCAGGGGGTTTAAGGGTAACTCCGAGAATCATTAGC
AACCTAAAGGAGGCTGGAGCCGATATAAGGGAAATAGAGAGAAGGCTACGTATACCTCTAGAGAAGATGCGTGAGGGAGT
GCAATACAATATCGATGTAGCAGATATAAAGAAGAATATAGCGGCTTATACCAGGAGAAAAGGCTTAAAGTATTTTCCAC
TAGCATGCATGGCTAACATTTACAGTCATGGCGAGTCATGTTGGAGAATGATCTCCATGGGAATAACGGATACTGCAAAG
CCGCTATACAAGCCCGAGAAAGATGTTGTCGAGGAGTTATTAAGGGAAATAGGGTGTCACGGTGGCTTCAAAGGGTTTTC
AAACGGTTTCATCAGGATAAGTATACGGTCTAAATGCGATAAGGTGCTGGCCGGGGAAGTGATCAAATACTGGTTCAGGG
CCTGCCCTGTCTTCACGGGTAGCTAG

Upstream 100 bases:

>100_bases
AACCTATTATAACATGTATTGTTCTAACCTGTCTCTAAGCGATTAAAACCCCGGTGTATTAATTATAGTAGTAGGGATAC
CTGGTGTTAAAGGATCAGCT

Downstream 100 bases:

>100_bases
GTTGGGTTTTCTCCCTGCAATTGCTTGCCAGGAGCCTCTCAAGCCCCCTTATCCTCTCCCTTAGTAAAATTATCTGGGCA
TACATTTTCAACTCATAATA

Product: DNA photolyase

Products: NA

Alternate protein names: DNA Photolyase; Radical SAM Domain Protein

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSKVSKYYAALRSKIMDEVSTILNDGEKKASLRDPHSKRAPRPCGLTIHTGIGCTMGCSYCYIGDMGFPTNSIKPYPLSG
VQLVYALLNNKYFLPGERGTLIAIGSVTEPFHPAVLVKTLEYIWAVKKYLGNYIQFSTKAYISMNTALKVAAIDPGISPL
ITLVSINYSSELERNAPRPEIRLESIRNLREAGLKPILFLRPIIPGITDKEYVEIIDKAAEYGAVGVVAGGLRVTPRIIS
NLKEAGADIREIERRLRIPLEKMREGVQYNIDVADIKKNIAAYTRRKGLKYFPLACMANIYSHGESCWRMISMGITDTAK
PLYKPEKDVVEELLREIGCHGGFKGFSNGFIRISIRSKCDKVLAGEVIKYWFRACPVFTGS

Sequences:

>Translated_381_residues
MSKVSKYYAALRSKIMDEVSTILNDGEKKASLRDPHSKRAPRPCGLTIHTGIGCTMGCSYCYIGDMGFPTNSIKPYPLSG
VQLVYALLNNKYFLPGERGTLIAIGSVTEPFHPAVLVKTLEYIWAVKKYLGNYIQFSTKAYISMNTALKVAAIDPGISPL
ITLVSINYSSELERNAPRPEIRLESIRNLREAGLKPILFLRPIIPGITDKEYVEIIDKAAEYGAVGVVAGGLRVTPRIIS
NLKEAGADIREIERRLRIPLEKMREGVQYNIDVADIKKNIAAYTRRKGLKYFPLACMANIYSHGESCWRMISMGITDTAK
PLYKPEKDVVEELLREIGCHGGFKGFSNGFIRISIRSKCDKVLAGEVIKYWFRACPVFTGS
>Mature_380_residues
SKVSKYYAALRSKIMDEVSTILNDGEKKASLRDPHSKRAPRPCGLTIHTGIGCTMGCSYCYIGDMGFPTNSIKPYPLSGV
QLVYALLNNKYFLPGERGTLIAIGSVTEPFHPAVLVKTLEYIWAVKKYLGNYIQFSTKAYISMNTALKVAAIDPGISPLI
TLVSINYSSELERNAPRPEIRLESIRNLREAGLKPILFLRPIIPGITDKEYVEIIDKAAEYGAVGVVAGGLRVTPRIISN
LKEAGADIREIERRLRIPLEKMREGVQYNIDVADIKKNIAAYTRRKGLKYFPLACMANIYSHGESCWRMISMGITDTAKP
LYKPEKDVVEELLREIGCHGGFKGFSNGFIRISIRSKCDKVLAGEVIKYWFRACPVFTGS

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42459; Mature: 42328

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVSKYYAALRSKIMDEVSTILNDGEKKASLRDPHSKRAPRPCGLTIHTGIGCTMGCSY
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEECCCCHHHCCCE
CYIGDMGFPTNSIKPYPLSGVQLVYALLNNKYFLPGERGTLIAIGSVTEPFHPAVLVKTL
EEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCHHHHHHHH
EYIWAVKKYLGNYIQFSTKAYISMNTALKVAAIDPGISPLITLVSINYSSELERNAPRPE
HHHHHHHHHHHHHHEECCEEEEEECCEEEEEEECCCHHHHHHHEECCCHHHHHHCCCCCC
IRLESIRNLREAGLKPILFLRPIIPGITDKEYVEIIDKAAEYGAVGVVAGGLRVTPRIIS
HHHHHHHHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCEECHHHHH
NLKEAGADIREIERRLRIPLEKMREGVQYNIDVADIKKNIAAYTRRKGLKYFPLACMANI
HHHHHCCCHHHHHHHHCCCHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YSHGESCWRMISMGITDTAKPLYKPEKDVVEELLREIGCHGGFKGFSNGFIRISIRSKCD
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHH
KVLAGEVIKYWFRACPVFTGS
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKVSKYYAALRSKIMDEVSTILNDGEKKASLRDPHSKRAPRPCGLTIHTGIGCTMGCSY
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEECCCCHHHCCCE
CYIGDMGFPTNSIKPYPLSGVQLVYALLNNKYFLPGERGTLIAIGSVTEPFHPAVLVKTL
EEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCHHHHHHHH
EYIWAVKKYLGNYIQFSTKAYISMNTALKVAAIDPGISPLITLVSINYSSELERNAPRPE
HHHHHHHHHHHHHHEECCEEEEEECCEEEEEEECCCHHHHHHHEECCCHHHHHHCCCCCC
IRLESIRNLREAGLKPILFLRPIIPGITDKEYVEIIDKAAEYGAVGVVAGGLRVTPRIIS
HHHHHHHHHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCEECHHHHH
NLKEAGADIREIERRLRIPLEKMREGVQYNIDVADIKKNIAAYTRRKGLKYFPLACMANI
HHHHHCCCHHHHHHHHCCCHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YSHGESCWRMISMGITDTAKPLYKPEKDVVEELLREIGCHGGFKGFSNGFIRISIRSKCD
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHH
KVLAGEVIKYWFRACPVFTGS
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA