| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884112
Identifier: 218884112
GI number: 218884112
Start: 772283
End: 772771
Strand: Reverse
Name: 218884112
Synonym: DKAM_0801
Alternate gene names: NA
Gene position: 772771-772283 (Counterclockwise)
Preceding gene: 218884117
Following gene: 218884109
Centisome position: 56.6
GC content: 48.47
Gene sequence:
>489_bases ATGAGTGTCTCCCTGCATGTGGTGGATATAACTATACCGGAGGGCACGAACATTATAATAGGCCGGAGCCACTTCATAAA GACGGTTGAAGACATATATGAGGCACTGGTCACCAGCGTGCCTGGTATAAGATTCGGGCTAGCGTTCAACGAGGCCAGCG GTAAGAGGTTGGTGAGATACGAGGGCAATGATGAAGAGTTAACTAGGGCAGCCATCGATGCAGCGTTAAAGATAGGTGCC GGCCACACATTCGTTCTGTTTATAAGAAACGCGTATCCGATAAACGTGTTGAACCAGTTGAAGAATATACAGGAGGTGGT TTCACTATACGTTGCAACAGGTAACCCGGTGCAGGTTATCGTAGGGGAGACTAATCAGGGTAGAGTAATACTCGGCGTGG TGGACGGGTACCCGCCGCTCGGTGTGGAATCGGAGGAGGATAAAAAAGAGAGGAGGGATTTCCTGAGGAAGATAGGTTAT AAAAAATAG
Upstream 100 bases:
>100_bases ACCAGCTTCAAAAACATCACCTAGGTCAAATACTATTGCCTTATACAGCATAGATTTATTCCTGGCTATCCTAATATATA ATCCAGGCGGGGGATCCTGG
Downstream 100 bases:
>100_bases TTTTTACCCGTTGCACTTCCTAATACTATCTTCTAGTAGCTGTATGTTTTTCAATACCTCGTCTTTACTACTAGTGGTAA TCCAGCATGAGGACTCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSVSLHVVDITIPEGTNIIIGRSHFIKTVEDIYEALVTSVPGIRFGLAFNEASGKRLVRYEGNDEELTRAAIDAALKIGA GHTFVLFIRNAYPINVLNQLKNIQEVVSLYVATGNPVQVIVGETNQGRVILGVVDGYPPLGVESEEDKKERRDFLRKIGY KK
Sequences:
>Translated_162_residues MSVSLHVVDITIPEGTNIIIGRSHFIKTVEDIYEALVTSVPGIRFGLAFNEASGKRLVRYEGNDEELTRAAIDAALKIGA GHTFVLFIRNAYPINVLNQLKNIQEVVSLYVATGNPVQVIVGETNQGRVILGVVDGYPPLGVESEEDKKERRDFLRKIGY KK >Mature_161_residues SVSLHVVDITIPEGTNIIIGRSHFIKTVEDIYEALVTSVPGIRFGLAFNEASGKRLVRYEGNDEELTRAAIDAALKIGAG HTFVLFIRNAYPINVLNQLKNIQEVVSLYVATGNPVQVIVGETNQGRVILGVVDGYPPLGVESEEDKKERRDFLRKIGYK K
Specific function: Unknown
COG id: COG1839
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17895; Mature: 17764
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSLHVVDITIPEGTNIIIGRSHFIKTVEDIYEALVTSVPGIRFGLAFNEASGKRLVRY CCEEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEE EGNDEELTRAAIDAALKIGAGHTFVLFIRNAYPINVLNQLKNIQEVVSLYVATGNPVQVI ECCHHHHHHHHHHHHHEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCEEEE VGETNQGRVILGVVDGYPPLGVESEEDKKERRDFLRKIGYKK EECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVSLHVVDITIPEGTNIIIGRSHFIKTVEDIYEALVTSVPGIRFGLAFNEASGKRLVRY CEEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEE EGNDEELTRAAIDAALKIGAGHTFVLFIRNAYPINVLNQLKNIQEVVSLYVATGNPVQVI ECCHHHHHHHHHHHHHEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCEEEE VGETNQGRVILGVVDGYPPLGVESEEDKKERRDFLRKIGYKK EECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA