| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884076
Identifier: 218884076
GI number: 218884076
Start: 734988
End: 736541
Strand: Direct
Name: 218884076
Synonym: DKAM_0765
Alternate gene names: NA
Gene position: 734988-736541 (Clockwise)
Preceding gene: 218884075
Following gene: 218884077
Centisome position: 53.84
GC content: 46.65
Gene sequence:
>1554_bases ATGCAGCCTCATAGTGGTTTCATGGAGTTATTTACATGGAAAATGGTGAGCGACCCCATATACGGCTTCGTTTACTTCAA CAGGGAAATCGAGGAACAGATTATTAATAGTAGCCTACTCCAGAGACTCCGCTACATAATGCAGTTGCAGACAGCCCACC TTGTTTACCCTGGCGCTGTTCACACCAGGTTCCAGCATAGCCTCGGTGTAATGCATCTAAGCGGGTTGGTTGCAGAGGAT TTAACATGGAAGCTCGTGTCTATTTATGGAAGGGAAGCATTAGAAGACTACTCTCCTGCCACACTAATAGAGGCCAGTAG ACTAGCCGGGCTACTCCACGATGTAGGGCATGCAGCCTTCGGCCACTCCTTCGAGCACTCTGTTCTATGGAGGAGGACGA TGCCCAGTGAGTTAGCGAATCATGAGAGGATAGGACTCAAGCTAGTGGAGCTAGTCTTAGAGGATGCACTCATTAAACTA GAAGAGAAGTATGGTTTAAACGGTTTAAACGATGTCTTAAAGAAGCTACTGAAGGATAATTATGATGGCCCACCACTTAT CAGGATGTATAGGTGGGTTATCAAGGATGGATTGTATCCAACCGATATAGTCGACTTCCTCAGGAGGGATAGCTATTATG CTGGTACAAGCGAGTATGGTTATATAAGTCATGAGAGGCTCTACAGGAACACCTACCCCCTCATAGAGGGAGGCGGCTTC AAACCCATCCTAGATAGAACTGGTCTAGGAGAGTTTAAGCAATACATGATTGCCAAGGCAAGCATGTATGAGCACGTATA CTATCACAGTGTTTGCAGAGCCTTCGATAAAATACTCGACACGCTCCTAGAGAGACTTGATGAGGAATACGGGCTCGTGG AAAGAGTGATCGCTATATCCAAGGGAAGGATCGAGGACTTCCTCGAGTTAACCGATGTATACGTATACAATATCCTCCTA GGTAAGGCTTTAAGGGAGGAGTCTGAAACCGGGCGTCTAGCCAGGTTGATGCTTATCGAGAGGAAGCCTGAGTGGAGGCG TGTCGGCGGAGACTACGTGTTAAACGGATACGGAGGACCGAGGTTCATTAGTGAAATACTTAAATTAATCTTTAACAGGG AGTGGAGGAGTAAAGTTGTATCCGCTCTCACGGAAGAATTATCTAGAAAGCTTAGTGGAATAGGGGTTACAGAGGAAGAT GTATGGGTTGACGTACTCGATGTATCACCGGTGCCCAAGACCCTTCTATACCCTGGTGGAGAAAACAGCATACCCGGGGT TGTGGTTTACACCGGTAAAATACTGGGCAGACAGATAGTCGTGGGGCAAGAGATAAATCTACTAGAGGGAGAGCTGCCTC TGGCAGTGATATTCAGGGCCTACGTGAGAAGAGGTAAGTACAGGGTTGAAGCAGAATCCATAGCCTCTAAGACCATTGGG GATGTCTTGGAGAGCCTGCTCAGGATAAACATGGATGAGTATAGGAGGAGTATTGAGGAAGCATATAAGTCTGCCACGGG TATTGATTACTCGAGATTCAAACTCACAATGTAA
Upstream 100 bases:
>100_bases GCTGGATTGCCAAAAAGACATAGATGGAAACCAAGTTGTCCCCACTCTACTCCAGTTTTTCATCTGGTAATCCATCCAGT GTTTAAGCGGTGATTATTTA
Downstream 100 bases:
>100_bases CGGGGGCTAGTGTAAATGGCTAGGCTGATAATCAACATGTATTTCAAAACCGATGAATATGTTGTAGAGGTGAGCAAGTA TAATAGTGAAGGATTACTAG
Product: metal-dependent phosphohydrolase, HD region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MQPHSGFMELFTWKMVSDPIYGFVYFNREIEEQIINSSLLQRLRYIMQLQTAHLVYPGAVHTRFQHSLGVMHLSGLVAED LTWKLVSIYGREALEDYSPATLIEASRLAGLLHDVGHAAFGHSFEHSVLWRRTMPSELANHERIGLKLVELVLEDALIKL EEKYGLNGLNDVLKKLLKDNYDGPPLIRMYRWVIKDGLYPTDIVDFLRRDSYYAGTSEYGYISHERLYRNTYPLIEGGGF KPILDRTGLGEFKQYMIAKASMYEHVYYHSVCRAFDKILDTLLERLDEEYGLVERVIAISKGRIEDFLELTDVYVYNILL GKALREESETGRLARLMLIERKPEWRRVGGDYVLNGYGGPRFISEILKLIFNREWRSKVVSALTEELSRKLSGIGVTEED VWVDVLDVSPVPKTLLYPGGENSIPGVVVYTGKILGRQIVVGQEINLLEGELPLAVIFRAYVRRGKYRVEAESIASKTIG DVLESLLRINMDEYRRSIEEAYKSATGIDYSRFKLTM
Sequences:
>Translated_517_residues MQPHSGFMELFTWKMVSDPIYGFVYFNREIEEQIINSSLLQRLRYIMQLQTAHLVYPGAVHTRFQHSLGVMHLSGLVAED LTWKLVSIYGREALEDYSPATLIEASRLAGLLHDVGHAAFGHSFEHSVLWRRTMPSELANHERIGLKLVELVLEDALIKL EEKYGLNGLNDVLKKLLKDNYDGPPLIRMYRWVIKDGLYPTDIVDFLRRDSYYAGTSEYGYISHERLYRNTYPLIEGGGF KPILDRTGLGEFKQYMIAKASMYEHVYYHSVCRAFDKILDTLLERLDEEYGLVERVIAISKGRIEDFLELTDVYVYNILL GKALREESETGRLARLMLIERKPEWRRVGGDYVLNGYGGPRFISEILKLIFNREWRSKVVSALTEELSRKLSGIGVTEED VWVDVLDVSPVPKTLLYPGGENSIPGVVVYTGKILGRQIVVGQEINLLEGELPLAVIFRAYVRRGKYRVEAESIASKTIG DVLESLLRINMDEYRRSIEEAYKSATGIDYSRFKLTM >Mature_517_residues MQPHSGFMELFTWKMVSDPIYGFVYFNREIEEQIINSSLLQRLRYIMQLQTAHLVYPGAVHTRFQHSLGVMHLSGLVAED LTWKLVSIYGREALEDYSPATLIEASRLAGLLHDVGHAAFGHSFEHSVLWRRTMPSELANHERIGLKLVELVLEDALIKL EEKYGLNGLNDVLKKLLKDNYDGPPLIRMYRWVIKDGLYPTDIVDFLRRDSYYAGTSEYGYISHERLYRNTYPLIEGGGF KPILDRTGLGEFKQYMIAKASMYEHVYYHSVCRAFDKILDTLLERLDEEYGLVERVIAISKGRIEDFLELTDVYVYNILL GKALREESETGRLARLMLIERKPEWRRVGGDYVLNGYGGPRFISEILKLIFNREWRSKVVSALTEELSRKLSGIGVTEED VWVDVLDVSPVPKTLLYPGGENSIPGVVVYTGKILGRQIVVGQEINLLEGELPLAVIFRAYVRRGKYRVEAESIASKTIG DVLESLLRINMDEYRRSIEEAYKSATGIDYSRFKLTM
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=192, Percent_Identity=31.7708333333333, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17537827, Length=433, Percent_Identity=23.7875288683603, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17537829, Length=433, Percent_Identity=23.7875288683603, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59391; Mature: 59391
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPHSGFMELFTWKMVSDPIYGFVYFNREIEEQIINSSLLQRLRYIMQLQTAHLVYPGAV CCCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH HTRFQHSLGVMHLSGLVAEDLTWKLVSIYGREALEDYSPATLIEASRLAGLLHDVGHAAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GHSFEHSVLWRRTMPSELANHERIGLKLVELVLEDALIKLEEKYGLNGLNDVLKKLLKDN CCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC YDGPPLIRMYRWVIKDGLYPTDIVDFLRRDSYYAGTSEYGYISHERLYRNTYPLIEGGGF CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCC KPILDRTGLGEFKQYMIAKASMYEHVYYHSVCRAFDKILDTLLERLDEEYGLVERVIAIS CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGRIEDFLELTDVYVYNILLGKALREESETGRLARLMLIERKPEWRRVGGDYVLNGYGGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCEEEECCCCH RFISEILKLIFNREWRSKVVSALTEELSRKLSGIGVTEEDVWVDVLDVSPVPKTLLYPGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHEECCCC ENSIPGVVVYTGKILGRQIVVGQEINLLEGELPLAVIFRAYVRRGKYRVEAESIASKTIG CCCCCEEEEEECHHHCCEEEECCCCCHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHH DVLESLLRINMDEYRRSIEEAYKSATGIDYSRFKLTM HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHEEECC >Mature Secondary Structure MQPHSGFMELFTWKMVSDPIYGFVYFNREIEEQIINSSLLQRLRYIMQLQTAHLVYPGAV CCCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH HTRFQHSLGVMHLSGLVAEDLTWKLVSIYGREALEDYSPATLIEASRLAGLLHDVGHAAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH GHSFEHSVLWRRTMPSELANHERIGLKLVELVLEDALIKLEEKYGLNGLNDVLKKLLKDN CCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC YDGPPLIRMYRWVIKDGLYPTDIVDFLRRDSYYAGTSEYGYISHERLYRNTYPLIEGGGF CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCC KPILDRTGLGEFKQYMIAKASMYEHVYYHSVCRAFDKILDTLLERLDEEYGLVERVIAIS CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGRIEDFLELTDVYVYNILLGKALREESETGRLARLMLIERKPEWRRVGGDYVLNGYGGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCEEEECCCCH RFISEILKLIFNREWRSKVVSALTEELSRKLSGIGVTEEDVWVDVLDVSPVPKTLLYPGG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHEECCCC ENSIPGVVVYTGKILGRQIVVGQEINLLEGELPLAVIFRAYVRRGKYRVEAESIASKTIG CCCCCEEEEEECHHHCCEEEECCCCCHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHH DVLESLLRINMDEYRRSIEEAYKSATGIDYSRFKLTM HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]