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The map label for this gene is 218884055

Identifier: 218884055

GI number: 218884055

Start: 714235

End: 714642

Strand: Reverse

Name: 218884055

Synonym: DKAM_0744

Alternate gene names: NA

Gene position: 714642-714235 (Counterclockwise)

Preceding gene: 218884058

Following gene: 218884054

Centisome position: 52.35

GC content: 44.85

Gene sequence:

>408_bases
ATGAAATATGGACTTCTAACCGAGAAGCAGTACCTTGTGCTTAAATACAGGGCACAGGGGTTAACACAGGAAGAGATAGC
GAGGATCCTAGGTATCTCTAGGAGCACTATTGCTGTAATAGAGAAGTCAGCCTTAAGGAAGATAAGGATGGCTGAAGAAA
CCATACGTCTATACAGGCTTCTCCATGCGGCAGGCTATATCGATATACCTGCTGGAACACATATGGCTGAAATACCAGGG
ATGCTTATCAAGAAGGCTGATGAACTAGGGATAAAGTTAAAGGGTGATTTCAACCTGATATATGGACAACTACGCTTACT
CATAGGTGCACGAGTAACGAGGTTGCCGCGATACGTGAGGGCGGTAATTCATAGCGATGGCTCATATGAGTTCTACCTCC
TGACCTAA

Upstream 100 bases:

>100_bases
TGGGCCCTGGATAAGGAGGTCTCTAGCTGTTTTTATTACTCTGCAGACGAAACATATACAGTGAACTAGTGGATCATCCC
TGAAAGCAATGGGGGTCTAA

Downstream 100 bases:

>100_bases
CCGTTCCCCGTTCTAGGTCATCATGAGGTCTCTGTAGGGTGGTTTATGGGTTGTCTAAGACTGGGGTTTATAAGCGTTGA
AAACCTTGAAAAAACTACAA

Product: Putative transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKYGLLTEKQYLVLKYRAQGLTQEEIARILGISRSTIAVIEKSALRKIRMAEETIRLYRLLHAAGYIDIPAGTHMAEIPG
MLIKKADELGIKLKGDFNLIYGQLRLLIGARVTRLPRYVRAVIHSDGSYEFYLLT

Sequences:

>Translated_135_residues
MKYGLLTEKQYLVLKYRAQGLTQEEIARILGISRSTIAVIEKSALRKIRMAEETIRLYRLLHAAGYIDIPAGTHMAEIPG
MLIKKADELGIKLKGDFNLIYGQLRLLIGARVTRLPRYVRAVIHSDGSYEFYLLT
>Mature_135_residues
MKYGLLTEKQYLVLKYRAQGLTQEEIARILGISRSTIAVIEKSALRKIRMAEETIRLYRLLHAAGYIDIPAGTHMAEIPG
MLIKKADELGIKLKGDFNLIYGQLRLLIGARVTRLPRYVRAVIHSDGSYEFYLLT

Specific function: Putative transcriptional regulator [H]

COG id: COG1356

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfx family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR007630
- InterPro:   IPR004645
- InterPro:   IPR018384 [H]

Pfam domain/function: PF04545 Sigma70_r4 [H]

EC number: NA

Molecular weight: Translated: 15366; Mature: 15366

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGLLTEKQYLVLKYRAQGLTQEEIARILGISRSTIAVIEKSALRKIRMAEETIRLYRL
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHAAGYIDIPAGTHMAEIPGMLIKKADELGIKLKGDFNLIYGQLRLLIGARVTRLPRYVR
HHHCCEEECCCCCCHHHHCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AVIHSDGSYEFYLLT
HHHCCCCCEEEEEEC
>Mature Secondary Structure
MKYGLLTEKQYLVLKYRAQGLTQEEIARILGISRSTIAVIEKSALRKIRMAEETIRLYRL
CCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHAAGYIDIPAGTHMAEIPGMLIKKADELGIKLKGDFNLIYGQLRLLIGARVTRLPRYVR
HHHCCEEECCCCCCHHHHCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AVIHSDGSYEFYLLT
HHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]