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The map label for this gene is 218884024

Identifier: 218884024

GI number: 218884024

Start: 683959

End: 684741

Strand: Reverse

Name: 218884024

Synonym: DKAM_0713

Alternate gene names: NA

Gene position: 684741-683959 (Counterclockwise)

Preceding gene: 218884026

Following gene: 218884021

Centisome position: 50.16

GC content: 50.45

Gene sequence:

>783_bases
ATGAGCCTTGAATCCCATATAACCCGAGTCATATGGGAGGAAGCCTCAAGGGACTGGGTGGAGCTAAGCAGTTGCGATAT
AGTAGTAGTAGGGGCAGGACCCTCAGGTCTTACAGCCGCTAAGTATCTGGCTGAGAAAGGATTGAAGACCCTCGTACTAG
AGAGGAGGCTTAGCTTCGGTGGGGGAATAGGCGGCGGAGGAATGCTCCTCCACAAGACCGTAGTCGATGAAAGAGGATTA
GGGATTCTCAGGGACTTCAATATAAGGTATAAGCCTTCAAGCATTAAGGGGCTATACGTGGTGGACACAGCAGAGTTAAC
AGCTAAGCTAGCCGCTGGAGCCCTTGATGCTGGAGCGAAGATCATACCAGGAATATCAGTAGAAGACGTCATTGTGAGAT
ATAACCCGTTCAGGGTACAGGGAGTAGTAGTAGAGTGGAGCGCCGTCCAGTTATCAGGACTGCATGTAGACCCATTATTC
ATAGAGTCAAAAGCAGTCATAGATGCAACAGGCCACGACGCCGAGGTGTTGAGGATACTCGAGAAGAAGAACCCTGAGTC
CAAGGTCAAGATACCCGGAGAGAAATCAGCATACAGCGAGAAAGCAGATGTAGACGTCGTAGAGTACACGGGGAGAGTGA
TCCCAGGCCTCTATGCTACTGGAATGGCGGTCGCAGCAGTACGCGGCTTAAACAGGATGGGGCCAATATTCACAGGCATG
CTACTCTCAGGGAGAAAAGTAGCCGAGGCAGTAATAAGAGACCTGGAATCAGCACCTAAGTAG

Upstream 100 bases:

>100_bases
GAATGGGTTTCAAGTGTGTCTCCTCCATGATAACCAAGTATTACATGGTACAATAACAAATTTATAAGTTTAACCTAGGA
TAGAAACAAGTGGTGAAACC

Downstream 100 bases:

>100_bases
CTTATTCAGGGCGTATCTCTGAGAGAGCCTTGAGCAGTATATCGGGTTGAACAATATGCTTGGGTATCCTGGCCCAAGCT
GTTTTCCTCGGATCCACTAG

Product: ribulose-1,5-biphosphate synthetase

Products: NA

Alternate protein names: Ribulose 1,5-bisphosphate synthase; RuBP synthase [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSLESHITRVIWEEASRDWVELSSCDIVVVGAGPSGLTAAKYLAEKGLKTLVLERRLSFGGGIGGGGMLLHKTVVDERGL
GILRDFNIRYKPSSIKGLYVVDTAELTAKLAAGALDAGAKIIPGISVEDVIVRYNPFRVQGVVVEWSAVQLSGLHVDPLF
IESKAVIDATGHDAEVLRILEKKNPESKVKIPGEKSAYSEKADVDVVEYTGRVIPGLYATGMAVAAVRGLNRMGPIFTGM
LLSGRKVAEAVIRDLESAPK

Sequences:

>Translated_260_residues
MSLESHITRVIWEEASRDWVELSSCDIVVVGAGPSGLTAAKYLAEKGLKTLVLERRLSFGGGIGGGGMLLHKTVVDERGL
GILRDFNIRYKPSSIKGLYVVDTAELTAKLAAGALDAGAKIIPGISVEDVIVRYNPFRVQGVVVEWSAVQLSGLHVDPLF
IESKAVIDATGHDAEVLRILEKKNPESKVKIPGEKSAYSEKADVDVVEYTGRVIPGLYATGMAVAAVRGLNRMGPIFTGM
LLSGRKVAEAVIRDLESAPK
>Mature_259_residues
SLESHITRVIWEEASRDWVELSSCDIVVVGAGPSGLTAAKYLAEKGLKTLVLERRLSFGGGIGGGGMLLHKTVVDERGLG
ILRDFNIRYKPSSIKGLYVVDTAELTAKLAAGALDAGAKIIPGISVEDVIVRYNPFRVQGVVVEWSAVQLSGLHVDPLFI
ESKAVIDATGHDAEVLRILEKKNPESKVKIPGEKSAYSEKADVDVVEYTGRVIPGLYATGMAVAAVRGLNRMGPIFTGML
LSGRKVAEAVIRDLESAPK

Specific function: Catalyzes the conversion of ribose 1,5-bisphosphate to ribulose 1,5-bisphosphate (RuBP), the CO(2) acceptor and substrate for RubisCO [H]

COG id: COG1635

COG function: function code H; Flavoprotein involved in thiazole biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THI4 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321583, Length=283, Percent_Identity=29.3286219081272, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR002922
- InterPro:   IPR022828 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27824; Mature: 27692

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLESHITRVIWEEASRDWVELSSCDIVVVGAGPSGLTAAKYLAEKGLKTLVLERRLSFG
CCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GGIGGGGMLLHKTVVDERGLGILRDFNIRYKPSSIKGLYVVDTAELTAKLAAGALDAGAK
CCCCCCCCEEEEEHHCCCCCCEEEECCEEECCCCCCEEEEEEHHHHHHHHHHCCCCCCCE
IIPGISVEDVIVRYNPFRVQGVVVEWSAVQLSGLHVDPLFIESKAVIDATGHDAEVLRIL
ECCCCCHHHEEEEECCEEEEEEEEEEEEEEEECCEECCEEECCCEEEEECCCHHHHHHHH
EKKNPESKVKIPGEKSAYSEKADVDVVEYTGRVIPGLYATGMAVAAVRGLNRMGPIFTGM
HHCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHH
LLSGRKVAEAVIRDLESAPK
HHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLESHITRVIWEEASRDWVELSSCDIVVVGAGPSGLTAAKYLAEKGLKTLVLERRLSFG
CHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GGIGGGGMLLHKTVVDERGLGILRDFNIRYKPSSIKGLYVVDTAELTAKLAAGALDAGAK
CCCCCCCCEEEEEHHCCCCCCEEEECCEEECCCCCCEEEEEEHHHHHHHHHHCCCCCCCE
IIPGISVEDVIVRYNPFRVQGVVVEWSAVQLSGLHVDPLFIESKAVIDATGHDAEVLRIL
ECCCCCHHHEEEEECCEEEEEEEEEEEEEEEECCEECCEEECCCEEEEECCCHHHHHHHH
EKKNPESKVKIPGEKSAYSEKADVDVVEYTGRVIPGLYATGMAVAAVRGLNRMGPIFTGM
HHCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHH
LLSGRKVAEAVIRDLESAPK
HHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]