| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884012
Identifier: 218884012
GI number: 218884012
Start: 672725
End: 673288
Strand: Direct
Name: 218884012
Synonym: DKAM_0701
Alternate gene names: NA
Gene position: 672725-673288 (Clockwise)
Preceding gene: 218884005
Following gene: 218884013
Centisome position: 49.28
GC content: 45.04
Gene sequence:
>564_bases ATGGAGTTCGACTCGAGTAGGATACTGGCCGGAATAGGATCAATCCTCATGGCAATAGGCGTCTTTATCCCGTTGCTGAC GCTAGTGGGATTAATACTGTTACTAATAGGGTTGAGGGGTCTCTCAGATACATACAGGGAGGAGGGTATATTCAGGAATG CCTTATATGCCGTGATAATCGGTGTAATAGGTTTAGTGACAATAATGTTTGTAGCAATATCTATAGTAGGGATCGCAATA ACCTTCGCTCCCAGTATACCACTGCACATGGCGAGAGGAGTAATTGGTACAGTACTACTTTTCATCGTGGTATACTTTGT CATCCTAGTATTAGAGGCATTATTCTACAAGAAGTCCCTTGATCTCCTAGCAACTAAATCAGGTGAGAAGCTCCTGGAGA CAGCAGGGCTATTATTATTGATCGGGGCGGCTTTGACGATCATAATAGTGGGATTAATACTGGTTTTCATAGCATGGATA ATAGCCGCAGTAGCCTTCTTCAGCTTGAAGCCACCACAGCCAGCCCAGGAGCAGGTAGTGCAGGCACCTCCGACACTAGC TTAA
Upstream 100 bases:
>100_bases GAAGGAATGCTTCCTGGAGTGAAATAATCAGTGCGTCACGGCCCTATATAAGGCTATATTAAGTCTAGAACAGATCTAAT ATATAAGTGAGGTAAGGGAA
Downstream 100 bases:
>100_bases AGAGCTTTTTCCCGGGGTTCACAGCTTCATGAGGCCTCGTCTTTCAAGGCGTGGAGCTTGTTTGTAAGCTTTTTGCTAGA CAGCAATACTTGGAGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVIIGVIGLVTIMFVAISIVGIAI TFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSLDLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWI IAAVAFFSLKPPQPAQEQVVQAPPTLA
Sequences:
>Translated_187_residues MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVIIGVIGLVTIMFVAISIVGIAI TFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSLDLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWI IAAVAFFSLKPPQPAQEQVVQAPPTLA >Mature_187_residues MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVIIGVIGLVTIMFVAISIVGIAI TFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSLDLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWI IAAVAFFSLKPPQPAQEQVVQAPPTLA
Specific function: Unknown
COG id: COG2245
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19928; Mature: 19928
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GVIGLVTIMFVAISIVGIAITFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWIIAAVAFFSLKPPQPAQEQVV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QAPPTLA CCCCCCC >Mature Secondary Structure MEFDSSRILAGIGSILMAIGVFIPLLTLVGLILLLIGLRGLSDTYREEGIFRNALYAVII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GVIGLVTIMFVAISIVGIAITFAPSIPLHMARGVIGTVLLFIVVYFVILVLEALFYKKSL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLATKSGEKLLETAGLLLLIGAALTIIIVGLILVFIAWIIAAVAFFSLKPPQPAQEQVV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QAPPTLA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA