Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884011
Identifier: 218884011
GI number: 218884011
Start: 671019
End: 672611
Strand: Reverse
Name: 218884011
Synonym: DKAM_0700
Alternate gene names: NA
Gene position: 672611-671019 (Counterclockwise)
Preceding gene: 218884015
Following gene: 218884010
Centisome position: 49.27
GC content: 50.91
Gene sequence:
>1593_bases ATGGATATGTTGTCTAGTTTACTAGGATACCTCGACTGGATTCTATGGGCTTTAAGCATTAGTGTTATAATAGTCTCAAT CATCAAGCATGTCCTAGGACACAGGGACTCCGGGGCCTGGTTCCTCAGGGGTGTAGCCGGGCTACTCCTAGCTGGCTTCT CCAGCATCTTAGTTAACTCCCTCTATAATGCACCGCAGGACATATTAGGGCATGCCCCCTACGGCTGGATCCTCTACGCG TCTTCACTGGGGCTCGTACTAATTGGTGGATTATATATTGCCGTGGGCAGGATCGGTGAAGGCATCTCCAGTATTCTAGG GGGCATCCTCCTCATCGGGGTTGGGTTGATGGGTATTTACCTGGGCAGCAGCCTCCATGGAGACTATGGCGGGCCACTCT ATGTCTACCTCTACACTGATAGGCAGGGCTATTATGTCGGGGAGGCGGTCGGCCTCTCGGTCTTCATCTCCCCTGGGATC AATGGTGCCTCCTATACTGTTTCATGGGGTGATGGGGTTGTTGAGGAGTTCGATGACGGCTCCTCCTTGAGGCTCAACCA TGTCTATAATTCAAGCGGGGCATACGTGATACGGGTTAATGTGAACAGTAGTGGTTTAACAGGCTTCAATAGTATCGCTG TAAGTGTCTCGGATAAACCGTGGACGCCTCCATGGCCTTTCGACATAATAGTCTCCCCTGTAACCGGGTTCTTCAGCATG TTCTGGCAGGTTGTCTCAACACCCTTCAACCTTCAGTTGCTCACTACATCTCCCAGGCTTGAGGAGGGGTCGGCTGAATG GGGTCTCTACGAGTTAACGCTCTCCATCTCGATGAGTGGGCTAGGCCTCTACCTGGGGTTCAGGCTACTCCAGGCCGTCT TCGAGGGTGAGCCGAGAGGCTTCATCGATGTTGTTAGAGAAGCCTTGATAGTCGTTCTCCTATCTCTTACAGCCCCCTAT CTCCATAATGCCTCGGTTGACATGCTTAACGCTCTCTCCCTCAAGGTGGTTGAGGGTGTTGATCCAATGCCTTCTATAGC CTCGATACTGGCACTTATATCAACAGGAGTGGCGCTCGGCTTCTTCATACCTGTAGCAGCGAATTTAGCCGTTGTATTAA CCATTATGCTTGCCTCAGCCTCCGCGCTAGTCGTGATCAGGCACTGGCTCATACTCACAATAACAGTTTCAACACCAATA CTGGCAGTCGCATACCTCCACCCGGCTCTACGTGGGGCAATGAAAAGGGTAATAGGACTCTGGGGTAGCCTGGTTCTCGC GGGCCCCTTAACAGCAGTGTTCATGAGGACCTGGAGCACTCAGGTCGGTGTAGCAGGGCAGGCTTTAACCAGTGTATTCA TATATATGATACTACCCAATATAATAGGATTACTGGGTGGAGTGGGCCCGGTGATCACGAGGAGTGCCAGCATACTATTA TACACCGTACTCAGAGCAATGAGAACAATAGAGGAGAGGAGGCAGACTAGAACACAGGGGTTGCAAGCTGTGGCAAACAC GCCTCAAAGAATAAGATTGTTAAATCCGTATCAATCCAGGGTACCATCATGGAGAACCAGGGATACCAAATAA
Upstream 100 bases:
>100_bases CTTATATATTAGATCTGTTCTAGACTTAATATAGCCTTATATAGGGCCGTGACGCACTGATTATTTCACTCCAGGAAGCA TTCCTTCTCCAGGGATCTCT
Downstream 100 bases:
>100_bases TAAATTAAGCCAGCAACTTTAAGTTCCACAACTCAATGACCCTATCAAGCTTCTTTTCCGCAAGAGGTGTTGGAAGACCT ATAATCCAGAAATGGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MDMLSSLLGYLDWILWALSISVIIVSIIKHVLGHRDSGAWFLRGVAGLLLAGFSSILVNSLYNAPQDILGHAPYGWILYA SSLGLVLIGGLYIAVGRIGEGISSILGGILLIGVGLMGIYLGSSLHGDYGGPLYVYLYTDRQGYYVGEAVGLSVFISPGI NGASYTVSWGDGVVEEFDDGSSLRLNHVYNSSGAYVIRVNVNSSGLTGFNSIAVSVSDKPWTPPWPFDIIVSPVTGFFSM FWQVVSTPFNLQLLTTSPRLEEGSAEWGLYELTLSISMSGLGLYLGFRLLQAVFEGEPRGFIDVVREALIVVLLSLTAPY LHNASVDMLNALSLKVVEGVDPMPSIASILALISTGVALGFFIPVAANLAVVLTIMLASASALVVIRHWLILTITVSTPI LAVAYLHPALRGAMKRVIGLWGSLVLAGPLTAVFMRTWSTQVGVAGQALTSVFIYMILPNIIGLLGGVGPVITRSASILL YTVLRAMRTIEERRQTRTQGLQAVANTPQRIRLLNPYQSRVPSWRTRDTK
Sequences:
>Translated_530_residues MDMLSSLLGYLDWILWALSISVIIVSIIKHVLGHRDSGAWFLRGVAGLLLAGFSSILVNSLYNAPQDILGHAPYGWILYA SSLGLVLIGGLYIAVGRIGEGISSILGGILLIGVGLMGIYLGSSLHGDYGGPLYVYLYTDRQGYYVGEAVGLSVFISPGI NGASYTVSWGDGVVEEFDDGSSLRLNHVYNSSGAYVIRVNVNSSGLTGFNSIAVSVSDKPWTPPWPFDIIVSPVTGFFSM FWQVVSTPFNLQLLTTSPRLEEGSAEWGLYELTLSISMSGLGLYLGFRLLQAVFEGEPRGFIDVVREALIVVLLSLTAPY LHNASVDMLNALSLKVVEGVDPMPSIASILALISTGVALGFFIPVAANLAVVLTIMLASASALVVIRHWLILTITVSTPI LAVAYLHPALRGAMKRVIGLWGSLVLAGPLTAVFMRTWSTQVGVAGQALTSVFIYMILPNIIGLLGGVGPVITRSASILL YTVLRAMRTIEERRQTRTQGLQAVANTPQRIRLLNPYQSRVPSWRTRDTK >Mature_530_residues MDMLSSLLGYLDWILWALSISVIIVSIIKHVLGHRDSGAWFLRGVAGLLLAGFSSILVNSLYNAPQDILGHAPYGWILYA SSLGLVLIGGLYIAVGRIGEGISSILGGILLIGVGLMGIYLGSSLHGDYGGPLYVYLYTDRQGYYVGEAVGLSVFISPGI NGASYTVSWGDGVVEEFDDGSSLRLNHVYNSSGAYVIRVNVNSSGLTGFNSIAVSVSDKPWTPPWPFDIIVSPVTGFFSM FWQVVSTPFNLQLLTTSPRLEEGSAEWGLYELTLSISMSGLGLYLGFRLLQAVFEGEPRGFIDVVREALIVVLLSLTAPY LHNASVDMLNALSLKVVEGVDPMPSIASILALISTGVALGFFIPVAANLAVVLTIMLASASALVVIRHWLILTITVSTPI LAVAYLHPALRGAMKRVIGLWGSLVLAGPLTAVFMRTWSTQVGVAGQALTSVFIYMILPNIIGLLGGVGPVITRSASILL YTVLRAMRTIEERRQTRTQGLQAVANTPQRIRLLNPYQSRVPSWRTRDTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57034; Mature: 57034
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMLSSLLGYLDWILWALSISVIIVSIIKHVLGHRDSGAWFLRGVAGLLLAGFSSILVNS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LYNAPQDILGHAPYGWILYASSLGLVLIGGLYIAVGRIGEGISSILGGILLIGVGLMGIY HHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSSLHGDYGGPLYVYLYTDRQGYYVGEAVGLSVFISPGINGASYTVSWGDGVVEEFDDG HCCCCCCCCCCCEEEEEEECCCCEEEEHCCCEEEEEECCCCCCEEEEECCCCHHHHCCCC SSLRLNHVYNSSGAYVIRVNVNSSGLTGFNSIAVSVSDKPWTPPWPFDIIVSPVTGFFSM CCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH FWQVVSTPFNLQLLTTSPRLEEGSAEWGLYELTLSISMSGLGLYLGFRLLQAVFEGEPRG HHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCH FIDVVREALIVVLLSLTAPYLHNASVDMLNALSLKVVEGVDPMPSIASILALISTGVALG HHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH FFIPVAANLAVVLTIMLASASALVVIRHWLILTITVSTPILAVAYLHPALRGAMKRVIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHH WGSLVLAGPLTAVFMRTWSTQVGVAGQALTSVFIYMILPNIIGLLGGVGPVITRSASILL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH YTVLRAMRTIEERRQTRTQGLQAVANTPQRIRLLNPYQSRVPSWRTRDTK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHCCCCCCCCCC >Mature Secondary Structure MDMLSSLLGYLDWILWALSISVIIVSIIKHVLGHRDSGAWFLRGVAGLLLAGFSSILVNS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LYNAPQDILGHAPYGWILYASSLGLVLIGGLYIAVGRIGEGISSILGGILLIGVGLMGIY HHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSSLHGDYGGPLYVYLYTDRQGYYVGEAVGLSVFISPGINGASYTVSWGDGVVEEFDDG HCCCCCCCCCCCEEEEEEECCCCEEEEHCCCEEEEEECCCCCCEEEEECCCCHHHHCCCC SSLRLNHVYNSSGAYVIRVNVNSSGLTGFNSIAVSVSDKPWTPPWPFDIIVSPVTGFFSM CCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH FWQVVSTPFNLQLLTTSPRLEEGSAEWGLYELTLSISMSGLGLYLGFRLLQAVFEGEPRG HHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCH FIDVVREALIVVLLSLTAPYLHNASVDMLNALSLKVVEGVDPMPSIASILALISTGVALG HHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH FFIPVAANLAVVLTIMLASASALVVIRHWLILTITVSTPILAVAYLHPALRGAMKRVIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHH WGSLVLAGPLTAVFMRTWSTQVGVAGQALTSVFIYMILPNIIGLLGGVGPVITRSASILL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHH YTVLRAMRTIEERRQTRTQGLQAVANTPQRIRLLNPYQSRVPSWRTRDTK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA