| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is yieN [C]
Identifier: 218883978
GI number: 218883978
Start: 638967
End: 640088
Strand: Direct
Name: yieN [C]
Synonym: DKAM_0667
Alternate gene names: 218883978
Gene position: 638967-640088 (Clockwise)
Preceding gene: 218883977
Following gene: 218883979
Centisome position: 46.8
GC content: 46.61
Gene sequence:
>1122_bases ATGGATAAGATTATTAATCTACTGGTAGAGCTTGAGAAGCCATTTGTCGGTAGGAGTGAGGAGGCGGAGCTACTTGTTCT CTCACTTATCTCGGGCGAACATGTCTTATTAATTGGCGAGCCTGGCACAGCTAAGTCTGCTCTAGCGCGTCGTTTAGCTG ACTTAGTTAAAGCCAGGTTCTTCAAATATATGCTTACAAGGTTTACGGAGCCGGATGAATTATTCGGCCCCCTGGATATA GCTGCCCTTAGGGATGGGAAATATATTAGGGTTACTAAGGGGAAGCTACCTGAAGCAGACATAGCCTTCATAGATGAGAT ATTCAATGCCAATTCAGCAGTCCTCAACATGCTACTTACCCTTATGAATGAGAGAGTAGTTTACGATGGCTACTCTGAGA TAAGGATACCCTTGCTAACCTTGATCTCTGCCAGTAATAATGTCCCGGACGAACCAGAGCTCCAGGCTATATATGATCGC TTCCTATTACGTCACTTCGTTAAACCGGTGAGCGAGGACTTGTGGGGAAGACTGCTGGATTCCTCATGGCTTATCGAACA AGGAGTCTACCAGGAGGCTAGGCCCGTTATCTCGATCGATGAAGTCAGGGCGGTTACATCAATGATCTTCAAGGTGAATG TAAGCGGGGTGAAGGAAAAATTGTTAAAGCTGTATGCTGTCTTCGAGGATCAGGGAGTGCATTTAACAGATAGGAGGAAG GGGAAGGCGCTTAAAGCCATTGCTGCCCACGCGTTTCTAAAGGGTAGAATGAAGGCTACCGAGGAAGACCTATATGTGTT AAAATACGTTGCGCCACGTGATAGAGAGGAGGCTGAGAAAGCATACTCAATCCTCCTAGACGAGGTTGAGGCACGGGAAA AACACCTGCGAGAGTTAAGCGAGATAGAGGCGAATCTCAGAGAGGCGAAGGCATATATACTGAGGAGTAGTGAGCTCGAC CCAAGGCTACTAGATTATCTAAGGAGCTTCGAAACCCTTAGGGAGAAACTCGAGAAACTTTCCCGTGAGACAGGCGATGA AGTTGTAAGGAGACGAGCCATAGATGTACTGGGCGAATTAAATGACGCAATAGACCTCATCAAGAGGAAGCTAGTACTAT GA
Upstream 100 bases:
>100_bases AAACCCGGTTTCAGCGGAGTGAGAATGAAGAAGAGTTACTCAGCTGAGAATGATTTCAAGGGTGATTTAGGTGAGCATGG CTTTCGAGCCAAGATATCTA
Downstream 100 bases:
>100_bases GCTCCAAGAATAAGGAAGGATACTTAAGAGGCGTGGACTACGGGGATCCTGTTGTAAGGTATAGAGGAGGGAAGATAAAG AGGTTGGCCGAGTTATTCGC
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MDKIINLLVELEKPFVGRSEEAELLVLSLISGEHVLLIGEPGTAKSALARRLADLVKARFFKYMLTRFTEPDELFGPLDI AALRDGKYIRVTKGKLPEADIAFIDEIFNANSAVLNMLLTLMNERVVYDGYSEIRIPLLTLISASNNVPDEPELQAIYDR FLLRHFVKPVSEDLWGRLLDSSWLIEQGVYQEARPVISIDEVRAVTSMIFKVNVSGVKEKLLKLYAVFEDQGVHLTDRRK GKALKAIAAHAFLKGRMKATEEDLYVLKYVAPRDREEAEKAYSILLDEVEAREKHLRELSEIEANLREAKAYILRSSELD PRLLDYLRSFETLREKLEKLSRETGDEVVRRRAIDVLGELNDAIDLIKRKLVL
Sequences:
>Translated_373_residues MDKIINLLVELEKPFVGRSEEAELLVLSLISGEHVLLIGEPGTAKSALARRLADLVKARFFKYMLTRFTEPDELFGPLDI AALRDGKYIRVTKGKLPEADIAFIDEIFNANSAVLNMLLTLMNERVVYDGYSEIRIPLLTLISASNNVPDEPELQAIYDR FLLRHFVKPVSEDLWGRLLDSSWLIEQGVYQEARPVISIDEVRAVTSMIFKVNVSGVKEKLLKLYAVFEDQGVHLTDRRK GKALKAIAAHAFLKGRMKATEEDLYVLKYVAPRDREEAEKAYSILLDEVEAREKHLRELSEIEANLREAKAYILRSSELD PRLLDYLRSFETLREKLEKLSRETGDEVVRRRAIDVLGELNDAIDLIKRKLVL >Mature_373_residues MDKIINLLVELEKPFVGRSEEAELLVLSLISGEHVLLIGEPGTAKSALARRLADLVKARFFKYMLTRFTEPDELFGPLDI AALRDGKYIRVTKGKLPEADIAFIDEIFNANSAVLNMLLTLMNERVVYDGYSEIRIPLLTLISASNNVPDEPELQAIYDR FLLRHFVKPVSEDLWGRLLDSSWLIEQGVYQEARPVISIDEVRAVTSMIFKVNVSGVKEKLLKLYAVFEDQGVHLTDRRK GKALKAIAAHAFLKGRMKATEEDLYVLKYVAPRDREEAEKAYSILLDEVEAREKHLRELSEIEANLREAKAYILRSSELD PRLLDYLRSFETLREKLEKLSRETGDEVVRRRAIDVLGELNDAIDLIKRKLVL
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082326, Length=279, Percent_Identity=36.9175627240143, Blast_Score=156, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR001270 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 42638; Mature: 42638
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIINLLVELEKPFVGRSEEAELLVLSLISGEHVLLIGEPGTAKSALARRLADLVKARF CHHHHHHHHHHCCCCCCCCCCHHEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH FKYMLTRFTEPDELFGPLDIAALRDGKYIRVTKGKLPEADIAFIDEIFNANSAVLNMLLT HHHHHHHCCCHHHHCCCCHHHEECCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHH LMNERVVYDGYSEIRIPLLTLISASNNVPDEPELQAIYDRFLLRHFVKPVSEDLWGRLLD HHHCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSWLIEQGVYQEARPVISIDEVRAVTSMIFKVNVSGVKEKLLKLYAVFEDQGVHLTDRRK CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECCCCC GKALKAIAAHAFLKGRMKATEEDLYVLKYVAPRDREEAEKAYSILLDEVEAREKHLRELS CHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EIEANLREAKAYILRSSELDPRLLDYLRSFETLREKLEKLSRETGDEVVRRRAIDVLGEL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDAIDLIKRKLVL HHHHHHHHHHHCC >Mature Secondary Structure MDKIINLLVELEKPFVGRSEEAELLVLSLISGEHVLLIGEPGTAKSALARRLADLVKARF CHHHHHHHHHHCCCCCCCCCCHHEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH FKYMLTRFTEPDELFGPLDIAALRDGKYIRVTKGKLPEADIAFIDEIFNANSAVLNMLLT HHHHHHHCCCHHHHCCCCHHHEECCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHH LMNERVVYDGYSEIRIPLLTLISASNNVPDEPELQAIYDRFLLRHFVKPVSEDLWGRLLD HHHCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSWLIEQGVYQEARPVISIDEVRAVTSMIFKVNVSGVKEKLLKLYAVFEDQGVHLTDRRK CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECCCCC GKALKAIAAHAFLKGRMKATEEDLYVLKYVAPRDREEAEKAYSILLDEVEAREKHLRELS CHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EIEANLREAKAYILRSSELDPRLLDYLRSFETLREKLEKLSRETGDEVVRRRAIDVLGEL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDAIDLIKRKLVL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]