| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is fba [H]
Identifier: 218883927
GI number: 218883927
Start: 583396
End: 584214
Strand: Reverse
Name: fba [H]
Synonym: DKAM_0616
Alternate gene names: 218883927
Gene position: 584214-583396 (Counterclockwise)
Preceding gene: 218883928
Following gene: 218883926
Centisome position: 42.79
GC content: 47.01
Gene sequence:
>819_bases ATGATGAGTTATAGTATAGCTGGGAAGGAGCTCAGACTTAAGAGATTGCTACCTAGTGGAAGAGGAGTAGTATTCGCATT TGACCACGGTGTTGAACACGGGCCCAGCGACTTTCCCCGTGAATACATCAATCCAAGGACAATAATAGGTAAAATCATTG AGGCAGGTGTGGATGCTGTAATGATGCTCCCGGCAACAGCGTTCATGACTAGGGATCTATGGATTGGGAAAACCAGTCTA ATAGTCAAGATAACCAGTAAAACCAATCTAAGGCCGGAGAATGAGAGACTACTTCAAAGTATTTTTGGATACGTGGAAGA CGCTGTGGCACTAGGAGCTGAAGCAGTTGCCGCCACAGTGTACTGGGGCAGTCAATACGAGGACGCCATGCTGAGGCAAT GGTTCGAAGTAAAGAGGCTTGCCGAGAAATACGGCTACCCCAGTCTCCAGCTGTCTTATCCAAGGGGGCCAGCGATAAAG AACATGTATGATGTCGAAATAGTCAAATACGGTGTGAGAGCTGCTATCGAGAGCGGGGCAGACTTAATCAAGACGTACTA CACGGGTAGCCTGGAGTCATTTAGAGAAGTAGTTGAGGCTGCATCAGGTATACCAGTATTAATGAGCGGTGGAGCTGTCA GGGAGAGATTCATAGACTTCCTCAGAGATGTTGAAAACGTTATAAGAGCCGGTGGTAGAGGAGTAGTAGTTGGAAGAAAC GTTTTCAGGCATAAGAACCCAGGCGGTGCCATAAAAGCAATAATGAAGGTCGTACACGAGGAAATGCCGCCCGAAGAAGC TATCAAATACGCTGAGTAA
Upstream 100 bases:
>100_bases ATCTTCATGCTTTAAATAACTATATAAATCGTATACGTAAATAGGGAGAACAATATTATTAACTCCTTTAAATAATTGTA GTTAGATAAGGAGGTGAACA
Downstream 100 bases:
>100_bases GGGAGTATAGAAACATGGTGGTTCATGGTGAATAAAAGTATTGATGTAGTGACAGTAGGACACGCACTAGTCGACATACG GATAGTTGTGAACGAGTTCC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Probable fructose-bisphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MMSYSIAGKELRLKRLLPSGRGVVFAFDHGVEHGPSDFPREYINPRTIIGKIIEAGVDAVMMLPATAFMTRDLWIGKTSL IVKITSKTNLRPENERLLQSIFGYVEDAVALGAEAVAATVYWGSQYEDAMLRQWFEVKRLAEKYGYPSLQLSYPRGPAIK NMYDVEIVKYGVRAAIESGADLIKTYYTGSLESFREVVEAASGIPVLMSGGAVRERFIDFLRDVENVIRAGGRGVVVGRN VFRHKNPGGAIKAIMKVVHEEMPPEEAIKYAE
Sequences:
>Translated_272_residues MMSYSIAGKELRLKRLLPSGRGVVFAFDHGVEHGPSDFPREYINPRTIIGKIIEAGVDAVMMLPATAFMTRDLWIGKTSL IVKITSKTNLRPENERLLQSIFGYVEDAVALGAEAVAATVYWGSQYEDAMLRQWFEVKRLAEKYGYPSLQLSYPRGPAIK NMYDVEIVKYGVRAAIESGADLIKTYYTGSLESFREVVEAASGIPVLMSGGAVRERFIDFLRDVENVIRAGGRGVVVGRN VFRHKNPGGAIKAIMKVVHEEMPPEEAIKYAE >Mature_272_residues MMSYSIAGKELRLKRLLPSGRGVVFAFDHGVEHGPSDFPREYINPRTIIGKIIEAGVDAVMMLPATAFMTRDLWIGKTSL IVKITSKTNLRPENERLLQSIFGYVEDAVALGAEAVAATVYWGSQYEDAMLRQWFEVKRLAEKYGYPSLQLSYPRGPAIK NMYDVEIVKYGVRAAIESGADLIKTYYTGSLESFREVVEAASGIPVLMSGGAVRERFIDFLRDVENVIRAGGRGVVVGRN VFRHKNPGGAIKAIMKVVHEEMPPEEAIKYAE
Specific function: Unknown
COG id: COG1830
COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoC/fbaB aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1787796, Length=268, Percent_Identity=29.1044776119403, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002915 [H]
Pfam domain/function: PF01791 DeoC [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 30252; Mature: 30252
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSYSIAGKELRLKRLLPSGRGVVFAFDHGVEHGPSDFPREYINPRTIIGKIIEAGVDAV CCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHCHHHH MMLPATAFMTRDLWIGKTSLIVKITSKTNLRPENERLLQSIFGYVEDAVALGAEAVAATV HHHHHHHHHHHHHEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHE YWGSQYEDAMLRQWFEVKRLAEKYGYPSLQLSYPRGPAIKNMYDVEIVKYGVRAAIESGA EECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCH DLIKTYYTGSLESFREVVEAASGIPVLMSGGAVRERFIDFLRDVENVIRAGGRGVVVGRN HHHHHHHCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCH VFRHKNPGGAIKAIMKVVHEEMPPEEAIKYAE HHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MMSYSIAGKELRLKRLLPSGRGVVFAFDHGVEHGPSDFPREYINPRTIIGKIIEAGVDAV CCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHCHHHH MMLPATAFMTRDLWIGKTSLIVKITSKTNLRPENERLLQSIFGYVEDAVALGAEAVAATV HHHHHHHHHHHHHEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHE YWGSQYEDAMLRQWFEVKRLAEKYGYPSLQLSYPRGPAIKNMYDVEIVKYGVRAAIESGA EECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCH DLIKTYYTGSLESFREVVEAASGIPVLMSGGAVRERFIDFLRDVENVIRAGGRGVVVGRN HHHHHHHCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCH VFRHKNPGGAIKAIMKVVHEEMPPEEAIKYAE HHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]