| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883916
Identifier: 218883916
GI number: 218883916
Start: 567077
End: 568738
Strand: Direct
Name: 218883916
Synonym: DKAM_0605
Alternate gene names: NA
Gene position: 567077-568738 (Clockwise)
Preceding gene: 218883915
Following gene: 218883917
Centisome position: 41.54
GC content: 42.96
Gene sequence:
>1662_bases ATGATCGGGTATCAGTATGAAATGACAGAGGTGTACACACCTTTGACAACACCATATGAGGCGCATCAGAGCGAGTCATT ATTCTCCTTGTTCATGCCATTCAATGCCCAGGTGCGTGACCCTATATATGGCTATATAGACTACGTGAAGGGATTCGAGG ATGAAGTCATAGACTCATGGGTCCTGCAGAGACTTAGATATATCTATCAACTCCAAGTGGCCCACATGATCTACCCTGGT GCAACGCATTCAAGGTTCTCCCATTCGCTTGGGGTCATGTATTCATCCTATAAGTATACGTCATTCCTCATAAGATCTAC GATAGCCTCGAATATTTCAGGTAGCTATAAGAAGGAGTTGGCCGCGCATCAAAAGGAGTTAATATATGCGTCGCGGCTAC TCGGCCTCTTACATGACATAGGTCATGGACCATTCAGTCATGCTTTCGATAGATACGTGTATAAATCGAAGGACTTCCTG GAGTATAGGGTAGGGAATCATGAGGTAATGGGGTATCTGCTCTACCGTGATGTCTTAAGGGACATTATTGAGAAAACATT GATGAGGGAGCGTGAAAGAATACAGGTTGATCCAGAGCTACTTATACGCATACTGGATGAAGGCTTGAAGCCTCCCAAGG GGATGAGGGAATTCACGGATCTCTACGTCAATGGACTTCTCAAGGACAGCGACTTCTATGATCCTCGTACAGTTGAAGGA TTGAATAATATTGTAAGACTTGTTGTAAGGGATTATGTGTATACCAGTGATATAATGGATTACCTCAGAAGAGATAGTTA TTTCACTGGTGTACCTGTTGGGGAGATCAATGATGAATGGATAATAAGGAACTCCTATATTGTTGAGAAAGATAATACAT TAATACCAGCAATATCTACGAAAGCGCTTGATGAAATAGCAAGACTGTTTGACGCGAGGAAGATAATGTATAAAAATGTA TACCTTCACCCAGTCAACCAGGCTTTCATCGAGACTGTTGGGCTTCTTCTTCAATGTGTTAAAAGCGATATAATAGAGAT CCTTTCAAGGATTATAGAGAAGGGTGATGCGATAGCCTACCTCGCTTTAACCGATCACTACATGTATTCACTCTTCAAGA AACTCCTGGTGGAGAGCCCTGGTAAACTGGAGTGCGAGAACAAGGAGCTAGCTAGAAACGCGCTGGAGAGCTTATTCATT AAGAGGAAACCCTTGTGGAAAATGGTTAAACGAATATCGATAGATCTCAGGAAAGCCGGCCATTTATACGGCAGATTCGG GGATGCACTGCAGAGACACATAGAGGAGGATATATATGGTGAGATATCTAGTTGGCTACGAGATAAGAATATAGGGCCTG ACGACTTGAAGATAATATTTGACAAGATAGATGTGTATCCATCAGCTGGAGCCGAGGTATTAAAGACTATAGAAGTGGTT GAGCTTAAAGACGGAAGGGTAATAGAAGCCTACTCTAAGTCCCTCGAGGAATTTGCAAGAGAGTCCGGGTTAATACCCGA GGCATTGATCACGGTGTATGTGAGCAGGTTAAAGTACAATGAATTATCTGGTGAGGAATTAAGGAAGATCAGTGAGATAG CTGCCAGGATAATCGAGGACGCAGTAAAGGGTACATTCAACGAAGCCCCTGAAACAAGCTAG
Upstream 100 bases:
>100_bases TTCTATCTTGAATCACCATATTCTAAGCTACTTGAAAAACAAGGGACTATGGAAAAATTTATTAATATGTAATCATTAAT ATGGGCATATAAATGATCAC
Downstream 100 bases:
>100_bases TGCCCTTGACAAGTTTTATTTTGTTCCACTTATATTCAGAGAATAAAATGCCGGCTTAATGATGGTGGGTTATTTAATGA AGGTATCAATATTGTTACCA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MIGYQYEMTEVYTPLTTPYEAHQSESLFSLFMPFNAQVRDPIYGYIDYVKGFEDEVIDSWVLQRLRYIYQLQVAHMIYPG ATHSRFSHSLGVMYSSYKYTSFLIRSTIASNISGSYKKELAAHQKELIYASRLLGLLHDIGHGPFSHAFDRYVYKSKDFL EYRVGNHEVMGYLLYRDVLRDIIEKTLMRERERIQVDPELLIRILDEGLKPPKGMREFTDLYVNGLLKDSDFYDPRTVEG LNNIVRLVVRDYVYTSDIMDYLRRDSYFTGVPVGEINDEWIIRNSYIVEKDNTLIPAISTKALDEIARLFDARKIMYKNV YLHPVNQAFIETVGLLLQCVKSDIIEILSRIIEKGDAIAYLALTDHYMYSLFKKLLVESPGKLECENKELARNALESLFI KRKPLWKMVKRISIDLRKAGHLYGRFGDALQRHIEEDIYGEISSWLRDKNIGPDDLKIIFDKIDVYPSAGAEVLKTIEVV ELKDGRVIEAYSKSLEEFARESGLIPEALITVYVSRLKYNELSGEELRKISEIAARIIEDAVKGTFNEAPETS
Sequences:
>Translated_553_residues MIGYQYEMTEVYTPLTTPYEAHQSESLFSLFMPFNAQVRDPIYGYIDYVKGFEDEVIDSWVLQRLRYIYQLQVAHMIYPG ATHSRFSHSLGVMYSSYKYTSFLIRSTIASNISGSYKKELAAHQKELIYASRLLGLLHDIGHGPFSHAFDRYVYKSKDFL EYRVGNHEVMGYLLYRDVLRDIIEKTLMRERERIQVDPELLIRILDEGLKPPKGMREFTDLYVNGLLKDSDFYDPRTVEG LNNIVRLVVRDYVYTSDIMDYLRRDSYFTGVPVGEINDEWIIRNSYIVEKDNTLIPAISTKALDEIARLFDARKIMYKNV YLHPVNQAFIETVGLLLQCVKSDIIEILSRIIEKGDAIAYLALTDHYMYSLFKKLLVESPGKLECENKELARNALESLFI KRKPLWKMVKRISIDLRKAGHLYGRFGDALQRHIEEDIYGEISSWLRDKNIGPDDLKIIFDKIDVYPSAGAEVLKTIEVV ELKDGRVIEAYSKSLEEFARESGLIPEALITVYVSRLKYNELSGEELRKISEIAARIIEDAVKGTFNEAPETS >Mature_553_residues MIGYQYEMTEVYTPLTTPYEAHQSESLFSLFMPFNAQVRDPIYGYIDYVKGFEDEVIDSWVLQRLRYIYQLQVAHMIYPG ATHSRFSHSLGVMYSSYKYTSFLIRSTIASNISGSYKKELAAHQKELIYASRLLGLLHDIGHGPFSHAFDRYVYKSKDFL EYRVGNHEVMGYLLYRDVLRDIIEKTLMRERERIQVDPELLIRILDEGLKPPKGMREFTDLYVNGLLKDSDFYDPRTVEG LNNIVRLVVRDYVYTSDIMDYLRRDSYFTGVPVGEINDEWIIRNSYIVEKDNTLIPAISTKALDEIARLFDARKIMYKNV YLHPVNQAFIETVGLLLQCVKSDIIEILSRIIEKGDAIAYLALTDHYMYSLFKKLLVESPGKLECENKELARNALESLFI KRKPLWKMVKRISIDLRKAGHLYGRFGDALQRHIEEDIYGEISSWLRDKNIGPDDLKIIFDKIDVYPSAGAEVLKTIEVV ELKDGRVIEAYSKSLEEFARESGLIPEALITVYVSRLKYNELSGEELRKISEIAARIIEDAVKGTFNEAPETS
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=361, Percent_Identity=26.5927977839335, Blast_Score=91, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17537827, Length=352, Percent_Identity=27.5568181818182, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17537829, Length=352, Percent_Identity=27.5568181818182, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64077; Mature: 64077
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGYQYEMTEVYTPLTTPYEAHQSESLFSLFMPFNAQVRDPIYGYIDYVKGFEDEVIDSW CCCCEEEHHHHHCCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHH VLQRLRYIYQLQVAHMIYPGATHSRFSHSLGVMYSSYKYTSFLIRSTIASNISGSYKKEL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAHQKELIYASRLLGLLHDIGHGPFSHAFDRYVYKSKDFLEYRVGNHEVMGYLLYRDVLR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH DIIEKTLMRERERIQVDPELLIRILDEGLKPPKGMREFTDLYVNGLLKDSDFYDPRTVEG HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH LNNIVRLVVRDYVYTSDIMDYLRRDSYFTGVPVGEINDEWIIRNSYIVEKDNTLIPAIST HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCEEECCHHH KALDEIARLFDARKIMYKNVYLHPVNQAFIETVGLLLQCVKSDIIEILSRIIEKGDAIAY HHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LALTDHYMYSLFKKLLVESPGKLECENKELARNALESLFIKRKPLWKMVKRISIDLRKAG EHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HLYGRFGDALQRHIEEDIYGEISSWLRDKNIGPDDLKIIFDKIDVYPSAGAEVLKTIEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHE ELKDGRVIEAYSKSLEEFARESGLIPEALITVYVSRLKYNELSGEELRKISEIAARIIED ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AVKGTFNEAPETS HHHCCCCCCCCCC >Mature Secondary Structure MIGYQYEMTEVYTPLTTPYEAHQSESLFSLFMPFNAQVRDPIYGYIDYVKGFEDEVIDSW CCCCEEEHHHHHCCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHH VLQRLRYIYQLQVAHMIYPGATHSRFSHSLGVMYSSYKYTSFLIRSTIASNISGSYKKEL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAHQKELIYASRLLGLLHDIGHGPFSHAFDRYVYKSKDFLEYRVGNHEVMGYLLYRDVLR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH DIIEKTLMRERERIQVDPELLIRILDEGLKPPKGMREFTDLYVNGLLKDSDFYDPRTVEG HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH LNNIVRLVVRDYVYTSDIMDYLRRDSYFTGVPVGEINDEWIIRNSYIVEKDNTLIPAIST HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCEEECCHHH KALDEIARLFDARKIMYKNVYLHPVNQAFIETVGLLLQCVKSDIIEILSRIIEKGDAIAY HHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LALTDHYMYSLFKKLLVESPGKLECENKELARNALESLFIKRKPLWKMVKRISIDLRKAG EHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH HLYGRFGDALQRHIEEDIYGEISSWLRDKNIGPDDLKIIFDKIDVYPSAGAEVLKTIEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHE ELKDGRVIEAYSKSLEEFARESGLIPEALITVYVSRLKYNELSGEELRKISEIAARIIED ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AVKGTFNEAPETS HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993 [H]