| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883901
Identifier: 218883901
GI number: 218883901
Start: 552004
End: 552660
Strand: Reverse
Name: 218883901
Synonym: DKAM_0590
Alternate gene names: NA
Gene position: 552660-552004 (Counterclockwise)
Preceding gene: 218883902
Following gene: 218883900
Centisome position: 40.48
GC content: 40.79
Gene sequence:
>657_bases GTGAAGGGCTTTATAGGTGTTGCTGAGAGATTAGTTGATAAATGCGGAAGCATATATCAATGCATATGGGTTGAAACAGC TATTGTTAAACCATATAACTCTGACACCTTTTACTGCATTGACTGCTTCTTTCATAATTACTCCAAGAGCGACAAGCCTG AATCTAGGCTCCTACTCTCATATAATTCAAAAACGAGCCCGGGAGAAATAATGCCCGGCACAGGTAAGAGCTTTAGAACC GTAAACGCTGATAGGGATACCTGTAGTAAGAAAGGAGTTGAGGAATACCTCCTAAACCTATATGAGTCTGCAAGGCATAG TATGAAGGAGTTAATCAGTGAGAGGGAAAAGAGCCAGAAAAAAATATCGTTTAGAGGCATGCTTCTAGGATTAATTCTGC CTCGTCAGCGGGATGAACTCCAGGAAGAGGGCTCTTATTGGGGGAGTTTAACAAGGTATAAGATCGTTATGGAGTTGCTA AAGCTGCTCGGATTTGAAAACGGTGTTTTAAGGGCTGAAGTGGACTCAATGTATATTCTATATGGTTTCGATAAAAAGGG GCGAGTATCTGCGTTGATAGGCAGTAATGTAATCGAGTTACCAAACTATAATAAGCTACTTGATACAGAGAAAGTATTGA GCATTCTCTTCCACTGA
Upstream 100 bases:
>100_bases GCTGCTGGGCTTGCTAAATGTATAATATAGGCTTAACAATTCTAGAAAATCAAAAAAAAGGCATCATAATAACATTAGTA ACATTATAGAGGGATCTGAT
Downstream 100 bases:
>100_bases TCAAGGTATATTTTTATTCTACATGTAAACTATATATCCACACTGGTGAACACCTTGGAATGGAGGGGCCAGTACATAGA GTTAATTAAGAAGCTAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKGFIGVAERLVDKCGSIYQCIWVETAIVKPYNSDTFYCIDCFFHNYSKSDKPESRLLLSYNSKTSPGEIMPGTGKSFRT VNADRDTCSKKGVEEYLLNLYESARHSMKELISEREKSQKKISFRGMLLGLILPRQRDELQEEGSYWGSLTRYKIVMELL KLLGFENGVLRAEVDSMYILYGFDKKGRVSALIGSNVIELPNYNKLLDTEKVLSILFH
Sequences:
>Translated_218_residues MKGFIGVAERLVDKCGSIYQCIWVETAIVKPYNSDTFYCIDCFFHNYSKSDKPESRLLLSYNSKTSPGEIMPGTGKSFRT VNADRDTCSKKGVEEYLLNLYESARHSMKELISEREKSQKKISFRGMLLGLILPRQRDELQEEGSYWGSLTRYKIVMELL KLLGFENGVLRAEVDSMYILYGFDKKGRVSALIGSNVIELPNYNKLLDTEKVLSILFH >Mature_218_residues MKGFIGVAERLVDKCGSIYQCIWVETAIVKPYNSDTFYCIDCFFHNYSKSDKPESRLLLSYNSKTSPGEIMPGTGKSFRT VNADRDTCSKKGVEEYLLNLYESARHSMKELISEREKSQKKISFRGMLLGLILPRQRDELQEEGSYWGSLTRYKIVMELL KLLGFENGVLRAEVDSMYILYGFDKKGRVSALIGSNVIELPNYNKLLDTEKVLSILFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24987; Mature: 24987
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFIGVAERLVDKCGSIYQCIWVETAIVKPYNSDTFYCIDCFFHNYSKSDKPESRLLLS CCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCEEEEEEEEHHCCCCCCCCCCEEEEE YNSKTSPGEIMPGTGKSFRTVNADRDTCSKKGVEEYLLNLYESARHSMKELISEREKSQK ECCCCCCCCCCCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KISFRGMLLGLILPRQRDELQEEGSYWGSLTRYKIVMELLKLLGFENGVLRAEVDSMYIL HHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEE YGFDKKGRVSALIGSNVIELPNYNKLLDTEKVLSILFH EECCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKGFIGVAERLVDKCGSIYQCIWVETAIVKPYNSDTFYCIDCFFHNYSKSDKPESRLLLS CCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCEEEEEEEEHHCCCCCCCCCCEEEEE YNSKTSPGEIMPGTGKSFRTVNADRDTCSKKGVEEYLLNLYESARHSMKELISEREKSQK ECCCCCCCCCCCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KISFRGMLLGLILPRQRDELQEEGSYWGSLTRYKIVMELLKLLGFENGVLRAEVDSMYIL HHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEE YGFDKKGRVSALIGSNVIELPNYNKLLDTEKVLSILFH EECCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA