| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883898
Identifier: 218883898
GI number: 218883898
Start: 548572
End: 549264
Strand: Reverse
Name: 218883898
Synonym: DKAM_0587
Alternate gene names: NA
Gene position: 549264-548572 (Counterclockwise)
Preceding gene: 218883899
Following gene: 218883897
Centisome position: 40.23
GC content: 44.88
Gene sequence:
>693_bases ATGGAGGTATATGTAGGCACTAGCGGCTGGCTCTATGACTGGAATGAGGAGGCTTCACTGGACTGGTATATTAGGGAAAG CGGGTTAAACGCTGTTGAATTAAACGCCAGCTTCTACAGGTTCCCCTACAGGAATCAAGTGGTGTCATGGGCTAGGAAGG GTAGGGGTATAAGATGGAGTATTAAGGTGCACAAGTCTATAACCCATTACAGGAAGCTTGGGAGAGACGCCTTAGAGATA TGGAGGAGGTTCCATAACTTATTCACCCCGATGAATGATGTCATTGACTTCTATCTTTTCCAGATGCCTCCTCAATTCAC ATGCAGTAAGGAGAATCTGGAGAAGATTGAGAGATTCCATGATGCATCCAACCTAGCCTCCAGGATGGCTGTTGAGTTCA GGCATGTATCATGCTTTAATGATGGTGTTGCCTCATGGGGGATTGATAAATCTATAGTGATAGTGTCAATAGATGCGCCC ATTGCTTCATGGATTACCAATATTATGGGGATAGTTTACTTAAGGATGCATGGAAGATCTTCGTGGTACGGACATGAGTA CACAATGGATGAGCTACGTGAGGTGGCGGGAAGAATAGTAAGGATGAAGCCCGAGAAAGTATATGTGTTCTTCAATAACG ATCACTGGATGCTTGAAAATGCCCGCTCACTAATGGGGATGCTTAGGGGTTAA
Upstream 100 bases:
>100_bases GGTTTCCTAGTAGCCACTGTAGTTACATATATTGCTACTAGAATACTATTATATGTCAGTATATAGTCGGGGAAGCCAGT ATATTAACTGGGAGAGAGTG
Downstream 100 bases:
>100_bases GAGGGGTCCTCTGCTTGAGGCTCTATGAGATATATCGCGACATATACTTGGAGCCATCTAAACAGGCAGTCGAGTTGGCG TTAAGATACGGGTATCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MEVYVGTSGWLYDWNEEASLDWYIRESGLNAVELNASFYRFPYRNQVVSWARKGRGIRWSIKVHKSITHYRKLGRDALEI WRRFHNLFTPMNDVIDFYLFQMPPQFTCSKENLEKIERFHDASNLASRMAVEFRHVSCFNDGVASWGIDKSIVIVSIDAP IASWITNIMGIVYLRMHGRSSWYGHEYTMDELREVAGRIVRMKPEKVYVFFNNDHWMLENARSLMGMLRG
Sequences:
>Translated_230_residues MEVYVGTSGWLYDWNEEASLDWYIRESGLNAVELNASFYRFPYRNQVVSWARKGRGIRWSIKVHKSITHYRKLGRDALEI WRRFHNLFTPMNDVIDFYLFQMPPQFTCSKENLEKIERFHDASNLASRMAVEFRHVSCFNDGVASWGIDKSIVIVSIDAP IASWITNIMGIVYLRMHGRSSWYGHEYTMDELREVAGRIVRMKPEKVYVFFNNDHWMLENARSLMGMLRG >Mature_230_residues MEVYVGTSGWLYDWNEEASLDWYIRESGLNAVELNASFYRFPYRNQVVSWARKGRGIRWSIKVHKSITHYRKLGRDALEI WRRFHNLFTPMNDVIDFYLFQMPPQFTCSKENLEKIERFHDASNLASRMAVEFRHVSCFNDGVASWGIDKSIVIVSIDAP IASWITNIMGIVYLRMHGRSSWYGHEYTMDELREVAGRIVRMKPEKVYVFFNNDHWMLENARSLMGMLRG
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27209; Mature: 27209
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVYVGTSGWLYDWNEEASLDWYIRESGLNAVELNASFYRFPYRNQVVSWARKGRGIRWS CEEEECCCCCEEECCCCCCEEEEEECCCCCEEEECCCEEECCCHHHHHHHHHHCCCEEEE IKVHKSITHYRKLGRDALEIWRRFHNLFTPMNDVIDFYLFQMPPQFTCSKENLEKIERFH EEEHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH DASNLASRMAVEFRHVSCFNDGVASWGIDKSIVIVSIDAPIASWITNIMGIVYLRMHGRS HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHEEEECCCC SWYGHEYTMDELREVAGRIVRMKPEKVYVFFNNDHWMLENARSLMGMLRG CCCCCCCCHHHHHHHHHHHEEECCCEEEEEECCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MEVYVGTSGWLYDWNEEASLDWYIRESGLNAVELNASFYRFPYRNQVVSWARKGRGIRWS CEEEECCCCCEEECCCCCCEEEEEECCCCCEEEECCCEEECCCHHHHHHHHHHCCCEEEE IKVHKSITHYRKLGRDALEIWRRFHNLFTPMNDVIDFYLFQMPPQFTCSKENLEKIERFH EEEHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH DASNLASRMAVEFRHVSCFNDGVASWGIDKSIVIVSIDAPIASWITNIMGIVYLRMHGRS HHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHHEEEECCCC SWYGHEYTMDELREVAGRIVRMKPEKVYVFFNNDHWMLENARSLMGMLRG CCCCCCCCHHHHHHHHHHHEEECCCEEEEEECCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA