| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883893
Identifier: 218883893
GI number: 218883893
Start: 543152
End: 543850
Strand: Reverse
Name: 218883893
Synonym: DKAM_0582
Alternate gene names: NA
Gene position: 543850-543152 (Counterclockwise)
Preceding gene: 218883894
Following gene: 218883892
Centisome position: 39.84
GC content: 41.34
Gene sequence:
>699_bases TTGGAGTCCGTCAAGCTACTAAGAGATGCGTTGAACACGTTGGAGACATTGTTAAGTCTAAAACAGTTGAGCGATCCACG ATTGAAGAGAAAAATCGAGGAAGCTATCGAGTCCCTTGAATTAACCCTTAGGGAGATCAGTGTCAACAACATAGAGTTAG CTAGGTTTATCAGTGATAAAACCAGGGAAACAGTATCTAAGATATCCGTCAGCAAGGAGTTAACCAGGGAAATCATTGAA GACTTGGAGAAACTAGTAAAATGGTGTAAAACAATTCCATATGATTTCACAGATAGAATAAAGTATGTGAGAAAGGGGTA CAGGTATTATTTATACGGGATGATGCTATTCTTCGTACTGGCTGGAACCTATACGCAAATATATGCTGTTTCAGCATTAC TTATAGCCCTCCCCTCATTAATGGCCATGTACTTCATGAGGAGGCGGCGTTCAATGGGCCTGATGCTGGCTTACGCGTCG ACACCGCTGCCCCTAGCCATATTTTCATGGATGATCGGGTACGTTACAAGGGCATTACTTGACCCGGGTGAAATAAATTA TCTAGCTGGGGTATATGGTTTACCGGTTGAAACAGTATATATGATACTATTATTGTACCTAGTGGGGAGCCTTGCTGGAT TACTATTCTTATCCATCGCGATATATATTCTTTACAAAAACAGGGGTGCCTTTATTTAG
Upstream 100 bases:
>100_bases TATCTGGAAGAATCTTAAGGCGCAGAAGAAGTAAATACTTAAACCATTCTTTTTTATTCCACCTTAATCATAATCATCCT CACAAGGGGGTCACTATATA
Downstream 100 bases:
>100_bases AACACCTGGTTAAATTGACCTGAATTTAATGCGTTTCAGAGATACGAATCTTTAAACCAATATGCCTCTTTAAAAATATG TGATATCCAATAATATTGAA
Product: alpha-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MESVKLLRDALNTLETLLSLKQLSDPRLKRKIEEAIESLELTLREISVNNIELARFISDKTRETVSKISVSKELTREIIE DLEKLVKWCKTIPYDFTDRIKYVRKGYRYYLYGMMLFFVLAGTYTQIYAVSALLIALPSLMAMYFMRRRRSMGLMLAYAS TPLPLAIFSWMIGYVTRALLDPGEINYLAGVYGLPVETVYMILLLYLVGSLAGLLFLSIAIYILYKNRGAFI
Sequences:
>Translated_232_residues MESVKLLRDALNTLETLLSLKQLSDPRLKRKIEEAIESLELTLREISVNNIELARFISDKTRETVSKISVSKELTREIIE DLEKLVKWCKTIPYDFTDRIKYVRKGYRYYLYGMMLFFVLAGTYTQIYAVSALLIALPSLMAMYFMRRRRSMGLMLAYAS TPLPLAIFSWMIGYVTRALLDPGEINYLAGVYGLPVETVYMILLLYLVGSLAGLLFLSIAIYILYKNRGAFI >Mature_232_residues MESVKLLRDALNTLETLLSLKQLSDPRLKRKIEEAIESLELTLREISVNNIELARFISDKTRETVSKISVSKELTREIIE DLEKLVKWCKTIPYDFTDRIKYVRKGYRYYLYGMMLFFVLAGTYTQIYAVSALLIALPSLMAMYFMRRRRSMGLMLAYAS TPLPLAIFSWMIGYVTRALLDPGEINYLAGVYGLPVETVYMILLLYLVGSLAGLLFLSIAIYILYKNRGAFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26722; Mature: 26722
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVKLLRDALNTLETLLSLKQLSDPRLKRKIEEAIESLELTLREISVNNIELARFISDK CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TRETVSKISVSKELTREIIEDLEKLVKWCKTIPYDFTDRIKYVRKGYRYYLYGMMLFFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AGTYTQIYAVSALLIALPSLMAMYFMRRRRSMGLMLAYASTPLPLAIFSWMIGYVTRALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHC DPGEINYLAGVYGLPVETVYMILLLYLVGSLAGLLFLSIAIYILYKNRGAFI CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MESVKLLRDALNTLETLLSLKQLSDPRLKRKIEEAIESLELTLREISVNNIELARFISDK CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TRETVSKISVSKELTREIIEDLEKLVKWCKTIPYDFTDRIKYVRKGYRYYLYGMMLFFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AGTYTQIYAVSALLIALPSLMAMYFMRRRRSMGLMLAYASTPLPLAIFSWMIGYVTRALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHC DPGEINYLAGVYGLPVETVYMILLLYLVGSLAGLLFLSIAIYILYKNRGAFI CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA