| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is porA [H]
Identifier: 218883890
GI number: 218883890
Start: 540885
End: 542144
Strand: Reverse
Name: porA [H]
Synonym: DKAM_0579
Alternate gene names: 218883890
Gene position: 542144-540885 (Counterclockwise)
Preceding gene: 218883891
Following gene: 218883889
Centisome position: 39.71
GC content: 46.51
Gene sequence:
>1260_bases ATGGAGAAAACCGTGTTCAAGCCGAAGATCCCTATTGAGAAACAGGTTTTAACAACCGCTAATGGTGATGAAGCAGTAGC CTACGCTGTAAAGCAGAGCTACGTAGATGTGGTGGCAGCATACCCTATAACACCCCAGACAATTATTGTTGAAAAATACT CGGAGTTCGTTAATGATGGATTAGTACACACGGAGTTCATACCGGTTGAATCAGAGCACTCAGCTATGAGTGCTTGCGTA GGTGCGGCAGCGGCTGGTGCCAGAGCTTTCACGGCCACATCATCCCAGGGATTGGCGTTAATGGTTGAAATAGTATATAT AGCATCAGCCCTAAGACTACCAATAGTTATGGCGGTTGTCAACAGGGCTCTCTCAGCACCGATAAACATACATAATGATC ACAGTGATGCATACCTGATGAGGGACTCTGGATGGATACAGTTATTCGTGGAAAACGTACAAGAGACGTATGATACCACT ATACAGGCATTCAAGATAGCGGAGGATCCACGTGTACAACTACCTGTCGCCGTAAACCTTGACGGGTTCTTCCTAAGCCA CACCCTGGAGAACTTCTACATGTTACCGGATGACACGGTCTATGAGTTCCTAGGAGGTCCGAGGAAACTGGTAAACGTTA AAGTAGACTATTTCAGCGAGGAAGTACCACTAGTGCTAAACCCGGCCAGGCCTTTAACATTCGGCTCACTGGATCTATAC GATTATTACTTTGAACATAAAGTCCAGCAGGTGGAAGCCATGAAGAATGTACCTCCTGTTGTAAGGGAGATAAATGAAGA ATGGTATAAGCTAACGGGCAGGAGATATGGTGATGGAGTAGTAGATGCATATGGCGTGGAGGACGCCGACATAGTGATTG TTGCGATGGGTAGTGGGGCAGGCACAATCAGGAGTGTTGTGAAGAAGCTAAGAGAAAAGGGGGAGAAGATAGGATTGCTA AAGATAAGGATGTTCAGGCCCTTCCCATACAGTGATGTAGCAGAAATACTCTCAGGCGCTAAAATAGTGGCTGTAATGGA TAAAGCTATAGGACCCGGCTCGTTTGGCGCGCTATACGAGGATATAGCGGCAAGTCTATATGATCTCGATGAGAGACCAC TGCTACTCGACTACATCTACGGCCTAGGAGGGAGAGACCTGCCACCCTCACTAGTCTACAGGATGATTGAAGAAGTAAAG AAAGACCTAGAGTCCAAAAGTGTTGAAAGGAAGATAAGGTACTTAGGGGTGAGGGAGTAG
Upstream 100 bases:
>100_bases AGGTAAACCTGGATTACTGTAAAGGTTGTGGGATATGTGCTCACGAATGCCCTGTCAAAGCTATATCAATGGTACCCGAG TTTGAGGAGGTGTAAGCGTG
Downstream 100 bases:
>100_bases CCATGACGGTTCAAACTCTGCCAGAATTCCCTGTTAAAAAGGGTGAGCCAGCATACAAGGTATGGATTTTCGAACCGGGT TGGAAGGGCGAGATACCGTT
Product: Pyruvate synthase subunit porA
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDGLVHTEFIPVESEHSAMSACV GAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVVNRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTT IQAFKIAEDPRVQLPVAVNLDGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGAGTIRSVVKKLREKGEKIGLL KIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYEDIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVK KDLESKSVERKIRYLGVRE
Sequences:
>Translated_419_residues MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDGLVHTEFIPVESEHSAMSACV GAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVVNRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTT IQAFKIAEDPRVQLPVAVNLDGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGAGTIRSVVKKLREKGEKIGLL KIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYEDIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVK KDLESKSVERKIRYLGVRE >Mature_419_residues MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDGLVHTEFIPVESEHSAMSACV GAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVVNRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTT IQAFKIAEDPRVQLPVAVNLDGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGAGTIRSVVKKLREKGEKIGLL KIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYEDIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVK KDLESKSVERKIRYLGVRE
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=398, Percent_Identity=30.4020100502513, Blast_Score=154, Evalue=9e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 46614; Mature: 46614
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDG CCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCC LVHTEFIPVESEHSAMSACVGAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVV CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH NRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTTIQAFKIAEDPRVQLPVAVNL HHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECC DGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY CHHHHHHHHHHEEECCCHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCEECCHHHH DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCC GTIRSVVKKLREKGEKIGLLKIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYE HHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHCCCEEEEEHHHCCCCCCHHHHHH DIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVKKDLESKSVERKIRYLGVRE HHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDG CCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCC LVHTEFIPVESEHSAMSACVGAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVV CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH NRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTTIQAFKIAEDPRVQLPVAVNL HHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECC DGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY CHHHHHHHHHHEEECCCHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCEECCHHHH DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCC GTIRSVVKKLREKGEKIGLLKIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYE HHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHCCCEEEEEHHHCCCCCCHHHHHH DIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVKKDLESKSVERKIRYLGVRE HHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550425; 10360571; 8305426 [H]