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The map label for this gene is 218883867

Identifier: 218883867

GI number: 218883867

Start: 519946

End: 520602

Strand: Direct

Name: 218883867

Synonym: DKAM_0556

Alternate gene names: NA

Gene position: 519946-520602 (Clockwise)

Preceding gene: 218883862

Following gene: 218883868

Centisome position: 38.09

GC content: 52.97

Gene sequence:

>657_bases
GTGTTGCTTATTTCAGAGAGGTTGCTTAGACCTAAAGAGGTTTGCCAGAGGCTTGGCATAAGCTATTCTACTCTCTCTAG
GTGGGTTAGAGAAGGCAGAATTAAGGCCATTAGGACTGCTGGCGGCAAGTACAGGATTCCCGAGAGCGAGGTCAGGAGGA
TCATTGAAGGCGTTCCGGCGGGAGAGGTCAGGGCAGTAGTATATGCCCGGGTGAGCTCCAGCGACCAGAAGAGCGACCTC
GAGAGACAGGTACAGTACCTTACGCAGTACTGCTCTGCCAAGGGATACAGGGTGGTCGACGTGTTGACGGACATCGCCAG
CGGGCTGAAGGCAGACCGCAGAGGGCTACTCAAGCTCTTCGAATACGTCGTCAATAAACAAGTAGACGTCGTGGTCGTTG
CATACAGGGACAGGTTGACTAGGTTCGGCTTCGAGTACTTGGAACACTTCTTCAGGCAGTACGGGGTCAGGATAGAGGTC
ATCTATGGTGATGAGCCTAAGGACGCGCACCGAGAGCTAGTCGAGGACTTAATAGAGATTGCCACATCGTTCGCGGGCAA
GCTCTACGGGCTTAGAAGCCACAAGAAAAAGAAGTTTCTCGAGGAATTCAAGAAGCTCCTAGAAGAGGTCGAAAAGGGCG
GTGGCGAGAGTAGCTAG

Upstream 100 bases:

>100_bases
TCACCACCCCAAACAAAACTACGGGAGAACGCTGGGGGCTATTTCATTGTTGAAAATGGAACGTAAGGTTTATAAGCTTT
GGTTTTGTTTATGTTTATTG

Downstream 100 bases:

>100_bases
AACCGTTGTAGTCGAGACGCCGCCTCTCCCGCGGAGGCTGTTCAGGGTCTTCGCCGAGCTCGAGGGCATGTACCGGAACA
TGGTCGAGCAACCTACAATG

Product: IS element ISDka1 orfA resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MLLISERLLRPKEVCQRLGISYSTLSRWVREGRIKAIRTAGGKYRIPESEVRRIIEGVPAGEVRAVVYARVSSSDQKSDL
ERQVQYLTQYCSAKGYRVVDVLTDIASGLKADRRGLLKLFEYVVNKQVDVVVVAYRDRLTRFGFEYLEHFFRQYGVRIEV
IYGDEPKDAHRELVEDLIEIATSFAGKLYGLRSHKKKKFLEEFKKLLEEVEKGGGESS

Sequences:

>Translated_218_residues
MLLISERLLRPKEVCQRLGISYSTLSRWVREGRIKAIRTAGGKYRIPESEVRRIIEGVPAGEVRAVVYARVSSSDQKSDL
ERQVQYLTQYCSAKGYRVVDVLTDIASGLKADRRGLLKLFEYVVNKQVDVVVVAYRDRLTRFGFEYLEHFFRQYGVRIEV
IYGDEPKDAHRELVEDLIEIATSFAGKLYGLRSHKKKKFLEEFKKLLEEVEKGGGESS
>Mature_218_residues
MLLISERLLRPKEVCQRLGISYSTLSRWVREGRIKAIRTAGGKYRIPESEVRRIIEGVPAGEVRAVVYARVSSSDQKSDL
ERQVQYLTQYCSAKGYRVVDVLTDIASGLKADRRGLLKLFEYVVNKQVDVVVVAYRDRLTRFGFEYLEHFFRQYGVRIEV
IYGDEPKDAHRELVEDLIEIATSFAGKLYGLRSHKKKKFLEEFKKLLEEVEKGGGESS

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 25114; Mature: 25114

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLISERLLRPKEVCQRLGISYSTLSRWVREGRIKAIRTAGGKYRIPESEVRRIIEGVPA
CCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHCCCC
GEVRAVVYARVSSSDQKSDLERQVQYLTQYCSAKGYRVVDVLTDIASGLKADRRGLLKLF
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EYVVNKQVDVVVVAYRDRLTRFGFEYLEHFFRQYGVRIEVIYGDEPKDAHRELVEDLIEI
HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHH
ATSFAGKLYGLRSHKKKKFLEEFKKLLEEVEKGGGESS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLLISERLLRPKEVCQRLGISYSTLSRWVREGRIKAIRTAGGKYRIPESEVRRIIEGVPA
CCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHCCCC
GEVRAVVYARVSSSDQKSDLERQVQYLTQYCSAKGYRVVDVLTDIASGLKADRRGLLKLF
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EYVVNKQVDVVVVAYRDRLTRFGFEYLEHFFRQYGVRIEVIYGDEPKDAHRELVEDLIEI
HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHH
ATSFAGKLYGLRSHKKKKFLEEFKKLLEEVEKGGGESS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]