| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883856
Identifier: 218883856
GI number: 218883856
Start: 510885
End: 512234
Strand: Direct
Name: 218883856
Synonym: DKAM_0545
Alternate gene names: NA
Gene position: 510885-512234 (Clockwise)
Preceding gene: 218883853
Following gene: 218883862
Centisome position: 37.42
GC content: 44.89
Gene sequence:
>1350_bases ATGAGCAGTGTAGCCATGGGAAGTGACATCAACGACGAGTTATCCAAGGTCGTCTCCTCGGTCACATTTAAAAGGGAAAA CCCCTTCATCCATGTATTGCCAGGTATATTTATTGCTTCAGCAGTGTTAATCATATTATACAACATCAATACAGTGTTAG ACATACAGAGTATCCCTGCGACGCTGGCACCATCTACAGTGTTTATTCTCGCATATCTTATTTCCTCAGCGCTCTCATCA TACTATCTACTATACTCTATTAAGAAACACCTCTATGAAAGCAGTGTTGTAACATACTACTTCACTCGTGGGAGAGACTT CAACGGGGCCCTACTATACATACGCAATGCTGTCACATCATCAACTCTTCCATCACCCAGTACAGGCATCCTCCTAGTGC TTCTCACAGGCGCTTACCCAGTTATACTAGTACTTGCCAGGAAGGCTGTTAGAAGACATGTGGTAGAGGAGGAGAAGGTG TTATTGGGCCGTAATTACTTCAGGGACTACTCGATAGCCGATATTGCTTTAGATTTAGCATTAACCGTGGCCACACTCGG CCTCTACGCATCATATTTATCATATAGGGTCATCGAGGAGTTCAACAACCATATCACACGCGTACACGGCACCCACCCAA ATCCACCTGGCCCATTACAACAGGAGGTAACTGAGGGAGAGGGGGGTTCGCTGACTTCGCGTGTTATTGGAGTCGTGTTA TTTATATTGGGGCTTACATGGGGTCTCGCCTATATGGGTGTACCATACAGCTTTGTCTCTAATCTATCACTAGGCCTGAC ATGGTTCGCGTTGAACCACATACTGAGGGATAAAAGCTATCCATTCATACTCGCGGTGAACATAGCGCTAACCTATATAT TGCTTATAGCAGGAGTAGCGACTGGTATAGCCGGCTACCCTGTTTACAGCGGGTTGTTTAAAGGTGTGTCAGAAAATATG AGAAGTATTGCTTCATCCATGTCGCTATACAGCCTAATAATAATGGTTTTCCTCAATAATCTCTCCATATCGATCCCATC GATTATTCCAATGGGTTCGCTTGCCCTTGCATCAGGGGTGTGTAATGCTGGGATAATAATTGGCTTAACGATTTACGGCC TCCCACTAGACACCGCTTTAAGAACGCTCTCCATCCTACTATATCCATACGCGATCACCGAGTTACTCGCGTACTCTATA CTAGCATCCTCCGTTACAAGGCTGGAAACCAGTAGAAAGTATCTTGCAATAGTTTTAACAGGTATACTACTATTACTGTT AGCAGCGGTCCTAGAGGCGATCACCATAATACAGGTACGTGGTCCAACTACTAGTAGAAGCCACCTCTAG
Upstream 100 bases:
>100_bases GAGTGAACCACTGTATTACCATGGATTAGGATCCTTATATTAATAATGTATTTAACTAGCTTCCAGATAAAGATAGATAC CAGATTCGTGGTGAGAGCGA
Downstream 100 bases:
>100_bases AGTGGAGCGTCAACTATATAGGGTTGTCCAGCGGGAAGCGTTTACTGAGTAGTTATTGATGACTGTAGCTTCAAGAGTTC CTCCGGGGGCTCGATAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSSVAMGSDINDELSKVVSSVTFKRENPFIHVLPGIFIASAVLIILYNINTVLDIQSIPATLAPSTVFILAYLISSALSS YYLLYSIKKHLYESSVVTYYFTRGRDFNGALLYIRNAVTSSTLPSPSTGILLVLLTGAYPVILVLARKAVRRHVVEEEKV LLGRNYFRDYSIADIALDLALTVATLGLYASYLSYRVIEEFNNHITRVHGTHPNPPGPLQQEVTEGEGGSLTSRVIGVVL FILGLTWGLAYMGVPYSFVSNLSLGLTWFALNHILRDKSYPFILAVNIALTYILLIAGVATGIAGYPVYSGLFKGVSENM RSIASSMSLYSLIIMVFLNNLSISIPSIIPMGSLALASGVCNAGIIIGLTIYGLPLDTALRTLSILLYPYAITELLAYSI LASSVTRLETSRKYLAIVLTGILLLLLAAVLEAITIIQVRGPTTSRSHL
Sequences:
>Translated_449_residues MSSVAMGSDINDELSKVVSSVTFKRENPFIHVLPGIFIASAVLIILYNINTVLDIQSIPATLAPSTVFILAYLISSALSS YYLLYSIKKHLYESSVVTYYFTRGRDFNGALLYIRNAVTSSTLPSPSTGILLVLLTGAYPVILVLARKAVRRHVVEEEKV LLGRNYFRDYSIADIALDLALTVATLGLYASYLSYRVIEEFNNHITRVHGTHPNPPGPLQQEVTEGEGGSLTSRVIGVVL FILGLTWGLAYMGVPYSFVSNLSLGLTWFALNHILRDKSYPFILAVNIALTYILLIAGVATGIAGYPVYSGLFKGVSENM RSIASSMSLYSLIIMVFLNNLSISIPSIIPMGSLALASGVCNAGIIIGLTIYGLPLDTALRTLSILLYPYAITELLAYSI LASSVTRLETSRKYLAIVLTGILLLLLAAVLEAITIIQVRGPTTSRSHL >Mature_448_residues SSVAMGSDINDELSKVVSSVTFKRENPFIHVLPGIFIASAVLIILYNINTVLDIQSIPATLAPSTVFILAYLISSALSSY YLLYSIKKHLYESSVVTYYFTRGRDFNGALLYIRNAVTSSTLPSPSTGILLVLLTGAYPVILVLARKAVRRHVVEEEKVL LGRNYFRDYSIADIALDLALTVATLGLYASYLSYRVIEEFNNHITRVHGTHPNPPGPLQQEVTEGEGGSLTSRVIGVVLF ILGLTWGLAYMGVPYSFVSNLSLGLTWFALNHILRDKSYPFILAVNIALTYILLIAGVATGIAGYPVYSGLFKGVSENMR SIASSMSLYSLIIMVFLNNLSISIPSIIPMGSLALASGVCNAGIIIGLTIYGLPLDTALRTLSILLYPYAITELLAYSIL ASSVTRLETSRKYLAIVLTGILLLLLAAVLEAITIIQVRGPTTSRSHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48758; Mature: 48627
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVAMGSDINDELSKVVSSVTFKRENPFIHVLPGIFIASAVLIILYNINTVLDIQSIPA CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEHHHCCC TLAPSTVFILAYLISSALSSYYLLYSIKKHLYESSVVTYYFTRGRDFNGALLYIRNAVTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEHHHHC STLPSPSTGILLVLLTGAYPVILVLARKAVRRHVVEEEKVLLGRNYFRDYSIADIALDLA CCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LTVATLGLYASYLSYRVIEEFNNHITRVHGTHPNPPGPLQQEVTEGEGGSLTSRVIGVVL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHH FILGLTWGLAYMGVPYSFVSNLSLGLTWFALNHILRDKSYPFILAVNIALTYILLIAGVA HHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH TGIAGYPVYSGLFKGVSENMRSIASSMSLYSLIIMVFLNNLSISIPSIIPMGSLALASGV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCC CNAGIIIGLTIYGLPLDTALRTLSILLYPYAITELLAYSILASSVTRLETSRKYLAIVLT CCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILLLLLAAVLEAITIIQVRGPTTSRSHL HHHHHHHHHHHHHHHEEEECCCCCCCCCC >Mature Secondary Structure SSVAMGSDINDELSKVVSSVTFKRENPFIHVLPGIFIASAVLIILYNINTVLDIQSIPA CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEHHHCCC TLAPSTVFILAYLISSALSSYYLLYSIKKHLYESSVVTYYFTRGRDFNGALLYIRNAVTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEHHHHC STLPSPSTGILLVLLTGAYPVILVLARKAVRRHVVEEEKVLLGRNYFRDYSIADIALDLA CCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LTVATLGLYASYLSYRVIEEFNNHITRVHGTHPNPPGPLQQEVTEGEGGSLTSRVIGVVL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHH FILGLTWGLAYMGVPYSFVSNLSLGLTWFALNHILRDKSYPFILAVNIALTYILLIAGVA HHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH TGIAGYPVYSGLFKGVSENMRSIASSMSLYSLIIMVFLNNLSISIPSIIPMGSLALASGV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCC CNAGIIIGLTIYGLPLDTALRTLSILLYPYAITELLAYSILASSVTRLETSRKYLAIVLT CCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GILLLLLAAVLEAITIIQVRGPTTSRSHL HHHHHHHHHHHHHHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA