| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is purL [H]
Identifier: 218883833
GI number: 218883833
Start: 487586
End: 489781
Strand: Direct
Name: purL [H]
Synonym: DKAM_0522
Alternate gene names: 218883833
Gene position: 487586-489781 (Clockwise)
Preceding gene: 218883832
Following gene: 218883834
Centisome position: 35.71
GC content: 46.31
Gene sequence:
>2196_bases TTGGTGAAAATGCCGCTGAGTGTTGAAGAGATAGATGAGATCAGGGATATACTTAAGAGAGAGCCAACCCGTGAAGAACT AGTCATGTTCGAGGCTCATTGGAGCGAGCACTGTTCCTATAAGAGCAGTAGAAGACTACTTAGACTACTACCTAACAAGG GTAATCATGTAGTGCTTGGGCCAGGCAGGGATGCACCGGCTGTTGAGGTTTTTCCGGGTATCTTAGCAGTATTCAAGATA GAGAGTCATAACCATCCATCTGCTGTAGACCCGTATAATGGGGCGGCAACTGGTATAGGAGGTATTATAAGGGATATACT CACGCTGGGTGCTAAGCCTATTGCACTACTGGATCTACTCTACATGGGCAACCCATTTAATCCACATGCAAAATGGTTGA TTAGGAATATTGTTAAAGGAATAAGTGACTACGGTAACAGGGTTGGAGTACCCGTTGTAGCTGGTGACACATGGTTTGAT GAATCATTCAATAAACAACCATTAGTCAATGTAGCATGTTTAGGCATAGTGGAGAAAAATAAGGCCGTTCTCTCCAAACC TAGGCCCGGTGATCTAGTGGTTATAATCGGTAATTCAACCGGTAGGGATGGATTGCTCGGAAGTAGCTTCGCGTCAGCAC CGTTGAAGGATAACATGGTTGAGGACATAGGTGCTGTGCAGATAGGTGATGCATTAATGGAGAAAATGCTCATAGATGTT GTTAATGAGGTAGTGGAGAAAAAGCTAGTGGACTACATAAAAGACCTCGGCGGCGGCGGGCTTACAACAGCTATATCGGA GGCTGCCGGGGACTATGATCTAGGTGTTGAAATATATTTAGACAGGCTGCATCTACGCATGGATCTAGAGCCATACGAGA TCCTTGCCTCGGAAAGTCAGGAGAGGATGCTACTGGCTGTTCCACGCGAAAACTTCAATGAATTAATCGGGATCCTCGAG AAATATGAGGTACCATATAGTGTTATAGGGATCTTCAATGATAGTGGTTTCATAAGAGTGTATTATAAGGGTAGAATAAT TGCGGAAGTCCCCAGTAAGGCTATGGCTAGGCCACGTGCACTGGTAAGGAAATCCAAGCCGCCTGAAGACGTGTTGAAGG GGCTAACTCCTCTCCAAGGCATCCCTGAGCCAGACCTGGAGGATGCCATTATAAGGATCTTCTCCTCACCTAATATTGTG TCTAGGAGATGGATATATGAGCAGTACGATCACGAGGTAGGCGGTAGAACGGTTGTGAAACCAGGTATAGGTGATGCAGC CGTCTTAAAGATTAATGATGATAAGGGTATAGCCGTGAAAGGCGATGGTAATCCAAGATACACGTGGCTCAATCCATTTA ATGGAGCTGCAAACGTGGTGTCTGAGTGTTATAGAAACCTGGTCTCAGTGGGATCGACGCCGCTAGCTATAGTGGATGAA TTAAATGCTGGTAACCCTGAGAAGCCTGAACACTACTGGTTCTTCGAGAATATGTTGAAGGGGCTGGCATGGATCTCGGA TGAACTAGGCCTACCGGTTGTAGGGGGTAAGGTCAGCTTCTATAACGAGGATTCAAGCGGTAATCAAGTGAAACCAACCC TAGCCATTGTAGGTATAGGTAGGGTTGAAAATGTAAGGAAAGCTAAGACAATGGAGTTTAAGGAGCCAGGGTCATATATA GTTGTGATCGGGGAAACTCTTCCGGAAATAGGGGGTAGTGAATACCTGTACAGGGTACACGGCTTAGAGGTAGGTGAGAT ACCTGTTCCGAGACCCCGTTTGGAATACATGCACGGGAGTACTGTAAGGATGCTCATCAACGAGGATGCAGTGTCCTCCG TGCACGATGTTTCAATAGGAGGGCTTGTAACGAGTATGCTTGAGATGGCTGTGGCAAGCGGGCTTGGTGCTGAAGTAGAG CTATCCCTTGTACCGTCGAGGGGTATTGATAGACTGGATTACCTATTATTCTCCGAGACCCAAGCGAGATACATTGTAGA AGTACCGTTAAACAAGGTTGAGAAGGCTAGGAGGATACTCGATGAAATGAATGTAGTATACGGAGTAGTGGGAAGGGTGT CGAGTAGAAGCCAGGTCGATCTTCTAGTGAATGGGAAGAGGATACTCGAGTTAGATATCGGTGTGCTCAGGGAGATCTAT GCTGACTCCCTGGAGAAATACCTTGAGAGAGGCTAG
Upstream 100 bases:
>100_bases CACATCCCGAGAGAGCCGTTGAACCTGAATTGACTCCAAGGGGCTTTAACCCCGGTGGCAAGCTTGTTTTTGAGAGTATA TATTTCGCGCTCAGGAATGG
Downstream 100 bases:
>100_bases TAATATATGTGTGGGATAGCCGCTTACATGGGAAGAGGGGATCACTTCAGGATCCTGGTTGAGCTATTATTGGAGTTGCA GCATAGGGGACAGGAGGCTG
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MVKMPLSVEEIDEIRDILKREPTREELVMFEAHWSEHCSYKSSRRLLRLLPNKGNHVVLGPGRDAPAVEVFPGILAVFKI ESHNHPSAVDPYNGAATGIGGIIRDILTLGAKPIALLDLLYMGNPFNPHAKWLIRNIVKGISDYGNRVGVPVVAGDTWFD ESFNKQPLVNVACLGIVEKNKAVLSKPRPGDLVVIIGNSTGRDGLLGSSFASAPLKDNMVEDIGAVQIGDALMEKMLIDV VNEVVEKKLVDYIKDLGGGGLTTAISEAAGDYDLGVEIYLDRLHLRMDLEPYEILASESQERMLLAVPRENFNELIGILE KYEVPYSVIGIFNDSGFIRVYYKGRIIAEVPSKAMARPRALVRKSKPPEDVLKGLTPLQGIPEPDLEDAIIRIFSSPNIV SRRWIYEQYDHEVGGRTVVKPGIGDAAVLKINDDKGIAVKGDGNPRYTWLNPFNGAANVVSECYRNLVSVGSTPLAIVDE LNAGNPEKPEHYWFFENMLKGLAWISDELGLPVVGGKVSFYNEDSSGNQVKPTLAIVGIGRVENVRKAKTMEFKEPGSYI VVIGETLPEIGGSEYLYRVHGLEVGEIPVPRPRLEYMHGSTVRMLINEDAVSSVHDVSIGGLVTSMLEMAVASGLGAEVE LSLVPSRGIDRLDYLLFSETQARYIVEVPLNKVEKARRILDEMNVVYGVVGRVSSRSQVDLLVNGKRILELDIGVLREIY ADSLEKYLERG
Sequences:
>Translated_731_residues MVKMPLSVEEIDEIRDILKREPTREELVMFEAHWSEHCSYKSSRRLLRLLPNKGNHVVLGPGRDAPAVEVFPGILAVFKI ESHNHPSAVDPYNGAATGIGGIIRDILTLGAKPIALLDLLYMGNPFNPHAKWLIRNIVKGISDYGNRVGVPVVAGDTWFD ESFNKQPLVNVACLGIVEKNKAVLSKPRPGDLVVIIGNSTGRDGLLGSSFASAPLKDNMVEDIGAVQIGDALMEKMLIDV VNEVVEKKLVDYIKDLGGGGLTTAISEAAGDYDLGVEIYLDRLHLRMDLEPYEILASESQERMLLAVPRENFNELIGILE KYEVPYSVIGIFNDSGFIRVYYKGRIIAEVPSKAMARPRALVRKSKPPEDVLKGLTPLQGIPEPDLEDAIIRIFSSPNIV SRRWIYEQYDHEVGGRTVVKPGIGDAAVLKINDDKGIAVKGDGNPRYTWLNPFNGAANVVSECYRNLVSVGSTPLAIVDE LNAGNPEKPEHYWFFENMLKGLAWISDELGLPVVGGKVSFYNEDSSGNQVKPTLAIVGIGRVENVRKAKTMEFKEPGSYI VVIGETLPEIGGSEYLYRVHGLEVGEIPVPRPRLEYMHGSTVRMLINEDAVSSVHDVSIGGLVTSMLEMAVASGLGAEVE LSLVPSRGIDRLDYLLFSETQARYIVEVPLNKVEKARRILDEMNVVYGVVGRVSSRSQVDLLVNGKRILELDIGVLREIY ADSLEKYLERG >Mature_731_residues MVKMPLSVEEIDEIRDILKREPTREELVMFEAHWSEHCSYKSSRRLLRLLPNKGNHVVLGPGRDAPAVEVFPGILAVFKI ESHNHPSAVDPYNGAATGIGGIIRDILTLGAKPIALLDLLYMGNPFNPHAKWLIRNIVKGISDYGNRVGVPVVAGDTWFD ESFNKQPLVNVACLGIVEKNKAVLSKPRPGDLVVIIGNSTGRDGLLGSSFASAPLKDNMVEDIGAVQIGDALMEKMLIDV VNEVVEKKLVDYIKDLGGGGLTTAISEAAGDYDLGVEIYLDRLHLRMDLEPYEILASESQERMLLAVPRENFNELIGILE KYEVPYSVIGIFNDSGFIRVYYKGRIIAEVPSKAMARPRALVRKSKPPEDVLKGLTPLQGIPEPDLEDAIIRIFSSPNIV SRRWIYEQYDHEVGGRTVVKPGIGDAAVLKINDDKGIAVKGDGNPRYTWLNPFNGAANVVSECYRNLVSVGSTPLAIVDE LNAGNPEKPEHYWFFENMLKGLAWISDELGLPVVGGKVSFYNEDSSGNQVKPTLAIVGIGRVENVRKAKTMEFKEPGSYI VVIGETLPEIGGSEYLYRVHGLEVGEIPVPRPRLEYMHGSTVRMLINEDAVSSVHDVSIGGLVTSMLEMAVASGLGAEVE LSLVPSRGIDRLDYLLFSETQARYIVEVPLNKVEKARRILDEMNVVYGVVGRVSSRSQVDLLVNGKRILELDIGVLREIY ADSLEKYLERG
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=737, Percent_Identity=25.6445047489824, Blast_Score=132, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17553022, Length=795, Percent_Identity=25.0314465408805, Blast_Score=123, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6321498, Length=486, Percent_Identity=26.1316872427983, Blast_Score=118, Evalue=3e-27, Organism=Drosophila melanogaster, GI24582111, Length=727, Percent_Identity=25.7221458046768, Blast_Score=123, Evalue=6e-28, Organism=Drosophila melanogaster, GI24582109, Length=727, Percent_Identity=25.7221458046768, Blast_Score=123, Evalue=6e-28, Organism=Drosophila melanogaster, GI17137292, Length=727, Percent_Identity=25.7221458046768, Blast_Score=123, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 80527; Mature: 80527
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKMPLSVEEIDEIRDILKREPTREELVMFEAHWSEHCSYKSSRRLLRLLPNKGNHVVLG CCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHCCCHHHHHHHHHCCCCCCEEEEC PGRDAPAVEVFPGILAVFKIESHNHPSAVDPYNGAATGIGGIIRDILTLGAKPIALLDLL CCCCCCHHHHHHCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH YMGNPFNPHAKWLIRNIVKGISDYGNRVGVPVVAGDTWFDESFNKQPLVNVACLGIVEKN HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECC KAVLSKPRPGDLVVIIGNSTGRDGLLGSSFASAPLKDNMVEDIGAVQIGDALMEKMLIDV CHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHH VNEVVEKKLVDYIKDLGGGGLTTAISEAAGDYDLGVEIYLDRLHLRMDLEPYEILASESQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEHEEECCCHHHHHHCCCC ERMLLAVPRENFNELIGILEKYEVPYSVIGIFNDSGFIRVYYKGRIIAEVPSKAMARPRA CCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEEECCHHHHHCCHH LVRKSKPPEDVLKGLTPLQGIPEPDLEDAIIRIFSSPNIVSRRWIYEQYDHEVGGRTVVK HHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEC PGIGDAAVLKINDDKGIAVKGDGNPRYTWLNPFNGAANVVSECYRNLVSVGSTPLAIVDE CCCCCEEEEEEECCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEC LNAGNPEKPEHYWFFENMLKGLAWISDELGLPVVGGKVSFYNEDSSGNQVKPTLAIVGIG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCEECCEEEEEECC RVENVRKAKTMEFKEPGSYIVVIGETLPEIGGSEYLYRVHGLEVGEIPVPRPRLEYMHGS CHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECEEECCCCCCCCHHHHCCCC TVRMLINEDAVSSVHDVSIGGLVTSMLEMAVASGLGAEVELSLVPSRGIDRLDYLLFSET EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCC QARYIVEVPLNKVEKARRILDEMNVVYGVVGRVSSRSQVDLLVNGKRILELDIGVLREIY CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEHHHHHHHHH ADSLEKYLERG HHHHHHHHHCC >Mature Secondary Structure MVKMPLSVEEIDEIRDILKREPTREELVMFEAHWSEHCSYKSSRRLLRLLPNKGNHVVLG CCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHCCCHHHHHHHHHCCCCCCEEEEC PGRDAPAVEVFPGILAVFKIESHNHPSAVDPYNGAATGIGGIIRDILTLGAKPIALLDLL CCCCCCHHHHHHCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH YMGNPFNPHAKWLIRNIVKGISDYGNRVGVPVVAGDTWFDESFNKQPLVNVACLGIVEKN HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECC KAVLSKPRPGDLVVIIGNSTGRDGLLGSSFASAPLKDNMVEDIGAVQIGDALMEKMLIDV CHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHH VNEVVEKKLVDYIKDLGGGGLTTAISEAAGDYDLGVEIYLDRLHLRMDLEPYEILASESQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEHEEECCCHHHHHHCCCC ERMLLAVPRENFNELIGILEKYEVPYSVIGIFNDSGFIRVYYKGRIIAEVPSKAMARPRA CCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEEECCHHHHHCCHH LVRKSKPPEDVLKGLTPLQGIPEPDLEDAIIRIFSSPNIVSRRWIYEQYDHEVGGRTVVK HHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEC PGIGDAAVLKINDDKGIAVKGDGNPRYTWLNPFNGAANVVSECYRNLVSVGSTPLAIVDE CCCCCEEEEEEECCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEC LNAGNPEKPEHYWFFENMLKGLAWISDELGLPVVGGKVSFYNEDSSGNQVKPTLAIVGIG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCEECCEEEEEECC RVENVRKAKTMEFKEPGSYIVVIGETLPEIGGSEYLYRVHGLEVGEIPVPRPRLEYMHGS CHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECEEECCCCCCCCHHHHCCCC TVRMLINEDAVSSVHDVSIGGLVTSMLEMAVASGLGAEVELSLVPSRGIDRLDYLLFSET EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCC QARYIVEVPLNKVEKARRILDEMNVVYGVVGRVSSRSQVDLLVNGKRILELDIGVLREIY CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEHHHHHHHHH ADSLEKYLERG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA