| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883709
Identifier: 218883709
GI number: 218883709
Start: 371548
End: 372093
Strand: Direct
Name: 218883709
Synonym: DKAM_0398
Alternate gene names: NA
Gene position: 371548-372093 (Clockwise)
Preceding gene: 218883705
Following gene: 218883712
Centisome position: 27.22
GC content: 39.38
Gene sequence:
>546_bases GTGGGCTTTGAGAGGGGTTTGACCGGGTTGTCCACGAGGTTATTGATGCTGATTGGTTTATCTATGTTGATCGCATCAAT CTTGCTGTCAATGGCATCAATGCTAACCTATTACAATGTAATCCATTATTCAACAATATATAATTTAACCACCATAGAAA TACCCCTTACATCAATCCTGGATAACACTGACCCAGGGAACCTGGTAAACATCACCTTAGCGGTTGAGAACATAGATACT CATATAGCAGAGATAACCATATTCAACAGGTTAATAGAGTATAGTGAATACGTTAAGCCAGGTGAAGTAGCGGTCTTCAC ACTGGATAATTTATTCTACAATATAATAGCCTCCGAGGATACCCAAGTATCAATCAATATGACATGTATAAGGGAGGAGA AACCATTTCTATTACTCTCACTGCTCTCTCTAGTCACGTTCACCATAGGCACTGTTGTCTCAGTGTTCTATGTGTACTTG AAGACACTTGAGAAAATGAGGCCTCAACAAGAACCATTCATGCATCCATGGAGAGATATAAATTGA
Upstream 100 bases:
>100_bases TTAATAATAGTAATGGAATATATTTACTCAATACTTCTCACCCATACAATTATTAAGGATTACATGAGTAGGTATATAAA TCTTAGCCCGCTATAAACAA
Downstream 100 bases:
>100_bases TCACCCGTATCCAGGTAAAAATAATCTGGTAGTCGACGATATCGATTTAAAAACAATTATTTTATAAACCCTTTTTACCG TTCTCAGACTTCAGGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSILDNTDPGNLVNITLAVENIDT HIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASEDTQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYL KTLEKMRPQQEPFMHPWRDIN
Sequences:
>Translated_181_residues MGFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSILDNTDPGNLVNITLAVENIDT HIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASEDTQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYL KTLEKMRPQQEPFMHPWRDIN >Mature_180_residues GFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSILDNTDPGNLVNITLAVENIDTH IAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASEDTQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYLK TLEKMRPQQEPFMHPWRDIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20596; Mature: 20465
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSIL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHH DNTDPGNLVNITLAVENIDTHIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASED CCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC TQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYLKTLEKMRPQQEPFMHPWRDI CEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC N C >Mature Secondary Structure GFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHH DNTDPGNLVNITLAVENIDTHIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASED CCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC TQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYLKTLEKMRPQQEPFMHPWRDI CEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA