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The map label for this gene is 218883698

Identifier: 218883698

GI number: 218883698

Start: 358095

End: 359672

Strand: Direct

Name: 218883698

Synonym: DKAM_0387

Alternate gene names: NA

Gene position: 358095-359672 (Clockwise)

Preceding gene: 218883696

Following gene: 218883705

Centisome position: 26.23

GC content: 43.85

Gene sequence:

>1578_bases
GTGGAATTGAACACGATATATAAGAACCCAGTTAAAGTAAAGGCGAGGATAGCATATATTTATCCAAGCATATACAGAGT
GATGATTTCCAGCTTAGCCCCCGACATCATATATCAATTATCAAACAGTATGAATGAAGCATACACTGAGAGATTCACTA
ATACGAGACTCACAGGTGATGAACCTCCCCCTAGAAGCCTTGAAACAAACACTCCATTAAAATACTTCGGCCTCATACTA
ACCACGCTACACTATGAGCCAGACATAGTAAACCTCGTAAGGCTATTGATAGCTGGGAAAATACCGGTTAAGCGTGAGCA
ACGTGATACACCAATAATCGCGGGGGGACCAGTTGTCATGGAGAATCCTATCCCATACAGCGGCATAATAGATGCATTCG
TTATAGGTGAAGCCGAGGTCACACTGGAAAAAGTGTTACTGAAATGGTTTGAGACGATGGATAAGAAACGGTTCCTGGAA
GAAATAGCTGGACTCACATACGTCTACGTTCCAGGCGTTAATGATGGGGAGAAAATTATAAGGAAGTATGTTGAAAGGCT
CGATGATGCGGCTCACCCTGTTCACCAGGTGGAAAACACGGAGATTGAACCGATATATGGCGGGGGCTTTAAGCTCGAGG
TTAGCAGAGGATGCCCGTACTGGTGTAGCTTCTGCCTTGAATCAAGGGTTTTCCAGCCATATAGAGAGAGGAGTATAATG
ATGCTTAAGGAGATTATGGAGGAGGGGTTATCGAGTAGTATATGGGGTAGGAGGGTAGTAATATATAGTCTCTCATTCCC
GGTATCCCCAACCCATGTGAAACTACTTGAATACATCTCACAGGAGAAAATAAAAGCCTCACTACCCTCACTAAGGCTTA
CTGCGTTGAGGAGCAATGTACTAGAGTTAATCAAAGAGATAGGTCAGAGGACTCTTAGCCTGGCACCGGAGACGTTTAGT
CCATTACTCCATAGAGTGTTCTTCAAGTACGTGAGCCTCCATGATGAAATAGCGAATACTATAGAAGACATCCTGAAACA
AGGCTTCAATATTAAATTATACATGATATATGGCGTGAAAGGAACCCGCATCGATGAGGTTAAAATAGACATCAATACTC
TGAAGAAGCTGGCCAGCTCAGCTAGGAGGCATGGTAGAGAGCTCTCAATATCGCTCAACCCATTAATACCGAAGCCTCAT
ACGATGTTCCAGTGGATTGGGATGGAGGAACCAGCTAAGCTTAAGGAAATACTCGGCTTATATAGGGGGGAGTTAAGGGG
GTTAATAGATGCGAGACCATATGATATAGAATGGGGATTCATACAAGCCTATATAGCTTTATCCAGTATGCCATTAGACA
ATGTATTCATCAACGTGGCAACCCGTGGTGGAGGATTATCGGCTTGGAGGAAAACCCTTGGAGACAGGTATCTTAGATCC
AGTTACGTGTTAAAGGGATACGAATTCGGTGGTAAACTACCTTGGGAATTCATTGTTCTAGGTGATCTACCTGTGAAAAC
CGCTGAGAAACAATACGAGGTGTTCCTAAGTCTTAGCGGTGGGGGAAGCATGCCCTAA

Upstream 100 bases:

>100_bases
CCTTACTAATGAACCTGGAGTAATCAATCATGCTTACACCGAGATATACGTATAGGTATATATGGTATATAAAGCTTAAT
ATCGTGGAGGAGATACGCGG

Downstream 100 bases:

>100_bases
ATCAAATATTAATGAGTAGAGGAGGAGTACAGCGCATATATAGGGTTTCTCAACGGCTTTAAGTAACTCCCTGATCTCGC
TGGTGACCGTATTATTCAGT

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MELNTIYKNPVKVKARIAYIYPSIYRVMISSLAPDIIYQLSNSMNEAYTERFTNTRLTGDEPPPRSLETNTPLKYFGLIL
TTLHYEPDIVNLVRLLIAGKIPVKREQRDTPIIAGGPVVMENPIPYSGIIDAFVIGEAEVTLEKVLLKWFETMDKKRFLE
EIAGLTYVYVPGVNDGEKIIRKYVERLDDAAHPVHQVENTEIEPIYGGGFKLEVSRGCPYWCSFCLESRVFQPYRERSIM
MLKEIMEEGLSSSIWGRRVVIYSLSFPVSPTHVKLLEYISQEKIKASLPSLRLTALRSNVLELIKEIGQRTLSLAPETFS
PLLHRVFFKYVSLHDEIANTIEDILKQGFNIKLYMIYGVKGTRIDEVKIDINTLKKLASSARRHGRELSISLNPLIPKPH
TMFQWIGMEEPAKLKEILGLYRGELRGLIDARPYDIEWGFIQAYIALSSMPLDNVFINVATRGGGLSAWRKTLGDRYLRS
SYVLKGYEFGGKLPWEFIVLGDLPVKTAEKQYEVFLSLSGGGSMP

Sequences:

>Translated_525_residues
MELNTIYKNPVKVKARIAYIYPSIYRVMISSLAPDIIYQLSNSMNEAYTERFTNTRLTGDEPPPRSLETNTPLKYFGLIL
TTLHYEPDIVNLVRLLIAGKIPVKREQRDTPIIAGGPVVMENPIPYSGIIDAFVIGEAEVTLEKVLLKWFETMDKKRFLE
EIAGLTYVYVPGVNDGEKIIRKYVERLDDAAHPVHQVENTEIEPIYGGGFKLEVSRGCPYWCSFCLESRVFQPYRERSIM
MLKEIMEEGLSSSIWGRRVVIYSLSFPVSPTHVKLLEYISQEKIKASLPSLRLTALRSNVLELIKEIGQRTLSLAPETFS
PLLHRVFFKYVSLHDEIANTIEDILKQGFNIKLYMIYGVKGTRIDEVKIDINTLKKLASSARRHGRELSISLNPLIPKPH
TMFQWIGMEEPAKLKEILGLYRGELRGLIDARPYDIEWGFIQAYIALSSMPLDNVFINVATRGGGLSAWRKTLGDRYLRS
SYVLKGYEFGGKLPWEFIVLGDLPVKTAEKQYEVFLSLSGGGSMP
>Mature_525_residues
MELNTIYKNPVKVKARIAYIYPSIYRVMISSLAPDIIYQLSNSMNEAYTERFTNTRLTGDEPPPRSLETNTPLKYFGLIL
TTLHYEPDIVNLVRLLIAGKIPVKREQRDTPIIAGGPVVMENPIPYSGIIDAFVIGEAEVTLEKVLLKWFETMDKKRFLE
EIAGLTYVYVPGVNDGEKIIRKYVERLDDAAHPVHQVENTEIEPIYGGGFKLEVSRGCPYWCSFCLESRVFQPYRERSIM
MLKEIMEEGLSSSIWGRRVVIYSLSFPVSPTHVKLLEYISQEKIKASLPSLRLTALRSNVLELIKEIGQRTLSLAPETFS
PLLHRVFFKYVSLHDEIANTIEDILKQGFNIKLYMIYGVKGTRIDEVKIDINTLKKLASSARRHGRELSISLNPLIPKPH
TMFQWIGMEEPAKLKEILGLYRGELRGLIDARPYDIEWGFIQAYIALSSMPLDNVFINVATRGGGLSAWRKTLGDRYLRS
SYVLKGYEFGGKLPWEFIVLGDLPVKTAEKQYEVFLSLSGGGSMP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59774; Mature: 59774

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNTIYKNPVKVKARIAYIYPSIYRVMISSLAPDIIYQLSNSMNEAYTERFTNTRLTGD
CCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EPPPRSLETNTPLKYFGLILTTLHYEPDIVNLVRLLIAGKIPVKREQRDTPIIAGGPVVM
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEE
ENPIPYSGIIDAFVIGEAEVTLEKVLLKWFETMDKKRFLEEIAGLTYVYVPGVNDGEKII
CCCCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
RKYVERLDDAAHPVHQVENTEIEPIYGGGFKLEVSRGCPYWCSFCLESRVFQPYRERSIM
HHHHHHHHHHCCCHHHCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHH
MLKEIMEEGLSSSIWGRRVVIYSLSFPVSPTHVKLLEYISQEKIKASLPSLRLTALRSNV
HHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LELIKEIGQRTLSLAPETFSPLLHRVFFKYVSLHDEIANTIEDILKQGFNIKLYMIYGVK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
GTRIDEVKIDINTLKKLASSARRHGRELSISLNPLIPKPHTMFQWIGMEEPAKLKEILGL
CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHH
YRGELRGLIDARPYDIEWGFIQAYIALSSMPLDNVFINVATRGGGLSAWRKTLGDRYLRS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
SYVLKGYEFGGKLPWEFIVLGDLPVKTAEKQYEVFLSLSGGGSMP
HHEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MELNTIYKNPVKVKARIAYIYPSIYRVMISSLAPDIIYQLSNSMNEAYTERFTNTRLTGD
CCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EPPPRSLETNTPLKYFGLILTTLHYEPDIVNLVRLLIAGKIPVKREQRDTPIIAGGPVVM
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEE
ENPIPYSGIIDAFVIGEAEVTLEKVLLKWFETMDKKRFLEEIAGLTYVYVPGVNDGEKII
CCCCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
RKYVERLDDAAHPVHQVENTEIEPIYGGGFKLEVSRGCPYWCSFCLESRVFQPYRERSIM
HHHHHHHHHHCCCHHHCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHH
MLKEIMEEGLSSSIWGRRVVIYSLSFPVSPTHVKLLEYISQEKIKASLPSLRLTALRSNV
HHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LELIKEIGQRTLSLAPETFSPLLHRVFFKYVSLHDEIANTIEDILKQGFNIKLYMIYGVK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
GTRIDEVKIDINTLKKLASSARRHGRELSISLNPLIPKPHTMFQWIGMEEPAKLKEILGL
CCEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHH
YRGELRGLIDARPYDIEWGFIQAYIALSSMPLDNVFINVATRGGGLSAWRKTLGDRYLRS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
SYVLKGYEFGGKLPWEFIVLGDLPVKTAEKQYEVFLSLSGGGSMP
HHEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]