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The map label for this gene is yjiR [C]

Identifier: 218883697

GI number: 218883697

Start: 356811

End: 358025

Strand: Reverse

Name: yjiR [C]

Synonym: DKAM_0386

Alternate gene names: 218883697

Gene position: 358025-356811 (Counterclockwise)

Preceding gene: 218883699

Following gene: 218883695

Centisome position: 26.22

GC content: 44.69

Gene sequence:

>1215_bases
ATGATTGATTACTCCAGGTTCATTAGTAAGGTTGCCTCGAATATTAAGGCATCGGAGATACGTGAACTACTAGCAATAAT
ACGAGGTAGAAAGGATGTAATAAGTTTTGCAGGAGGCATACCAGACCCAGCCTTATTCCCACGTAAAGAACTAGCAAAAA
TAGCTGGAATAGTCATCGAGAAATACGGTGACGATGCATTACAGTACAGCGAAACCAAGGGGATAATAGAGGTTAGGGAG
ACATTGAGCGACTTCCTAGCTAGAAAGAGGGAGATACATGCCGATGCAGAGGACATAATTATAACTAGTGGGAGCCAGTC
GGCCCTAGACATAGTTTCAAGGGCCCTCATAGATCCAGGCGACATAGTGATAACTGAGAGCCCATCATATCTGGCAGCAC
TTGGAGCATTCAAGATGAATGGCGCCAAACTAATAGGTGTAAAAATAGATGAGAACGGTATGAGGACGGAGCTCCTGGAG
GAAAAGCTGAAGCAGTTGGGAGATGATGTGAAGAAAGTGAAATTCATATATGTTATACCAGTTGGCCAGAACCCGGCTGG
CACCACTATGAATAAGGAGAGGAAGAAACATCTCCTCGAGATAGCTTCGAAATACGATTTATTAATCCTGGAGGACGATC
CCTACAGTTACATCATCTACGAGGAAGGAGCTGAAACAGCATCACTGAAGAGCTTGGATAAAGAGGGTAGAGTTATGTAT
ATGAGTACTGTAAGCAAGATTCTAGCACCAGGCCTGAGGATCGGGTGGATCGTTGCTGAAAAGGAGCTTATAAGGAGGTT
TGAGATAGTGAAGCAATACGTGGACCTGCACTCACCCACCTTAAACCAGTTCATAGTTGCCGAGGCCATTAAAACGGGTT
TAATAGACGATGTTGTTCAGAAAGCCATACCATACTATAAGGCAAAAAGGAACACGATGCTTGAAGCTATCAAAGAAAAC
TTCCCCGATTACGTCTGGTACTCTAAACCCATAGGAGGGCTCTTTGTATTCGCATACGTGTACAAGAATGGATTCAATGC
AGGAATGCTCTTAGAGAAAGCGGTGAAGCAGTATAAAGTGGCATATGTACCGGGCGGTAGCTTTCACCCTGAGGGAGACG
GAGTTAATAGTATGAGGCTGAACTTCAGTTACCCCACGCACGAGCAGATAAGGGAGGGAATAGCTAGGCTGGCCAAATTG
ATTCGTGAATCCTAG

Upstream 100 bases:

>100_bases
CTGGGTTCTTATATATCGTGTTCAATTCCACCCGCGTATCTCCTCCACGATATTAAGCTTTATATACCATATATACCTAT
ACGTATATCTCGGTGTAAGC

Downstream 100 bases:

>100_bases
TTTACTTCAACACTATTATGGATCCAAGTTCTTTAGGCGGCAGCAACCCAATAGTTTTCTCAATATCCCCTATCTCAATT
ATTTTTACAAAGCTGGATAA

Product: putative multiple substrate aminotransferase

Products: NA

Alternate protein names: AspB-1 [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MIDYSRFISKVASNIKASEIRELLAIIRGRKDVISFAGGIPDPALFPRKELAKIAGIVIEKYGDDALQYSETKGIIEVRE
TLSDFLARKREIHADAEDIIITSGSQSALDIVSRALIDPGDIVITESPSYLAALGAFKMNGAKLIGVKIDENGMRTELLE
EKLKQLGDDVKKVKFIYVIPVGQNPAGTTMNKERKKHLLEIASKYDLLILEDDPYSYIIYEEGAETASLKSLDKEGRVMY
MSTVSKILAPGLRIGWIVAEKELIRRFEIVKQYVDLHSPTLNQFIVAEAIKTGLIDDVVQKAIPYYKAKRNTMLEAIKEN
FPDYVWYSKPIGGLFVFAYVYKNGFNAGMLLEKAVKQYKVAYVPGGSFHPEGDGVNSMRLNFSYPTHEQIREGIARLAKL
IRES

Sequences:

>Translated_404_residues
MIDYSRFISKVASNIKASEIRELLAIIRGRKDVISFAGGIPDPALFPRKELAKIAGIVIEKYGDDALQYSETKGIIEVRE
TLSDFLARKREIHADAEDIIITSGSQSALDIVSRALIDPGDIVITESPSYLAALGAFKMNGAKLIGVKIDENGMRTELLE
EKLKQLGDDVKKVKFIYVIPVGQNPAGTTMNKERKKHLLEIASKYDLLILEDDPYSYIIYEEGAETASLKSLDKEGRVMY
MSTVSKILAPGLRIGWIVAEKELIRRFEIVKQYVDLHSPTLNQFIVAEAIKTGLIDDVVQKAIPYYKAKRNTMLEAIKEN
FPDYVWYSKPIGGLFVFAYVYKNGFNAGMLLEKAVKQYKVAYVPGGSFHPEGDGVNSMRLNFSYPTHEQIREGIARLAKL
IRES
>Mature_404_residues
MIDYSRFISKVASNIKASEIRELLAIIRGRKDVISFAGGIPDPALFPRKELAKIAGIVIEKYGDDALQYSETKGIIEVRE
TLSDFLARKREIHADAEDIIITSGSQSALDIVSRALIDPGDIVITESPSYLAALGAFKMNGAKLIGVKIDENGMRTELLE
EKLKQLGDDVKKVKFIYVIPVGQNPAGTTMNKERKKHLLEIASKYDLLILEDDPYSYIIYEEGAETASLKSLDKEGRVMY
MSTVSKILAPGLRIGWIVAEKELIRRFEIVKQYVDLHSPTLNQFIVAEAIKTGLIDDVVQKAIPYYKAKRNTMLEAIKEN
FPDYVWYSKPIGGLFVFAYVYKNGFNAGMLLEKAVKQYKVAYVPGGSFHPEGDGVNSMRLNFSYPTHEQIREGIARLAKL
IRES

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=433, Percent_Identity=32.7944572748268, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI33469970, Length=433, Percent_Identity=32.7944572748268, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI95147551, Length=271, Percent_Identity=23.9852398523985, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI169881279, Length=271, Percent_Identity=23.9852398523985, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI56713256, Length=267, Percent_Identity=23.9700374531835, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI56713254, Length=267, Percent_Identity=23.9700374531835, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI1790797, Length=398, Percent_Identity=25.3768844221106, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1787710, Length=374, Percent_Identity=25.9358288770053, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788722, Length=360, Percent_Identity=24.1666666666667, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1786816, Length=302, Percent_Identity=22.1854304635762, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788627, Length=333, Percent_Identity=24.6246246246246, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17567369, Length=328, Percent_Identity=25, Blast_Score=72, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6321236, Length=495, Percent_Identity=24.8484848484848, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6321929, Length=295, Percent_Identity=27.4576271186441, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6321000, Length=434, Percent_Identity=24.8847926267281, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21356535, Length=353, Percent_Identity=24.6458923512748, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 45254; Mature: 45254

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDYSRFISKVASNIKASEIRELLAIIRGRKDVISFAGGIPDPALFPRKELAKIAGIVIE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KYGDDALQYSETKGIIEVRETLSDFLARKREIHADAEDIIITSGSQSALDIVSRALIDPG
HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCC
DIVITESPSYLAALGAFKMNGAKLIGVKIDENGMRTELLEEKLKQLGDDVKKVKFIYVIP
CEEEECCCHHHHHHHHHEECCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHEEEEEEEE
VGQNPAGTTMNKERKKHLLEIASKYDLLILEDDPYSYIIYEEGAETASLKSLDKEGRVMY
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCEEH
MSTVSKILAPGLRIGWIVAEKELIRRFEIVKQYVDLHSPTLNQFIVAEAIKTGLIDDVVQ
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KAIPYYKAKRNTMLEAIKENFPDYVWYSKPIGGLFVFAYVYKNGFNAGMLLEKAVKQYKV
HHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEE
AYVPGGSFHPEGDGVNSMRLNFSYPTHEQIREGIARLAKLIRES
EEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDYSRFISKVASNIKASEIRELLAIIRGRKDVISFAGGIPDPALFPRKELAKIAGIVIE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KYGDDALQYSETKGIIEVRETLSDFLARKREIHADAEDIIITSGSQSALDIVSRALIDPG
HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCC
DIVITESPSYLAALGAFKMNGAKLIGVKIDENGMRTELLEEKLKQLGDDVKKVKFIYVIP
CEEEECCCHHHHHHHHHEECCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHEEEEEEEE
VGQNPAGTTMNKERKKHLLEIASKYDLLILEDDPYSYIIYEEGAETASLKSLDKEGRVMY
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCEEH
MSTVSKILAPGLRIGWIVAEKELIRRFEIVKQYVDLHSPTLNQFIVAEAIKTGLIDDVVQ
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KAIPYYKAKRNTMLEAIKENFPDYVWYSKPIGGLFVFAYVYKNGFNAGMLLEKAVKQYKV
HHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEE
AYVPGGSFHPEGDGVNSMRLNFSYPTHEQIREGIARLAKLIRES
EEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]