| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is iorA [H]
Identifier: 218883674
GI number: 218883674
Start: 337254
End: 339167
Strand: Direct
Name: iorA [H]
Synonym: DKAM_0363
Alternate gene names: 218883674
Gene position: 337254-339167 (Clockwise)
Preceding gene: 218883672
Following gene: 218883675
Centisome position: 24.7
GC content: 45.3
Gene sequence:
>1914_bases ATGAGTTACATACTTTCAGGAAAAGGTGAAAAAGTATTATTAATGGGGAATGAAGCAATAGCCAGAGCAGCACTCGAGGC AGGAATCTGTGTAGCAACAGCGTATCCTGGAACACCATCCACGGAGATAATAGAGACTTTAAGCGAGGTAGCCGGTAAAT GCGGGATATATGTCGAATGGAGTATAAATGAGAAGGTGGCATTTGAAACAGCGTACGCGGCAGCAATAACCGGGGTTAGA AGCATTACGGCTATGAAGCATGTAGGCGTTAATGTGGCGGCAGATATATTGATGAGTAGTGCTTACTCAGGTGTGAAAGA AGGCTTCGTAGTGGTTTCAGCTGATGATCCAGGCGAACACAGCAGCCAAAACGAGCAGGATAATAGGTGGTACGGGTTAC TAGCCCATATACCAGTTATTGAACCCAGCAGCGCGAGGGACTCATATTATTTAACCAAGGAGGCATTTGAGCTAAGCAGT AGATACGAGCACCCAGTTATTCTTAGAACCACTACAAGGGTAAGTCACACAAGGCAACCAGTTGAATTAAACGGTGATAT ACCATCAGAGAAAAAGTGTAAGGGAGTCTTCGATAAAAACTATGAGAGATGGGTGCTTGTACCAGCTAACGCGAGGAAGC AGAAGACTAGGATGATGAAGATATGGGAAGCTATAAGGCGTAATGAGGGGAGGGAACCATTTATATACGTGTGGAATCCA GGTAGGAGTAAAGTAGTTATTGCAAGCGGGATTAGCTACTCTCATGCCGAGGAAGCCCTTAGACTACTCGACGCCTTAAA CGATGTGACATTAATCAAGGTCTCCCTACCAGTCCCCCTTCCACCAACACCTATCACTACAGTTTTAAAGGATGCAAAAG AAGTACTGGTCATCGAGGAGCTCGATCCCGTGGTAGAGACCCAGGTGAAAGACATAGCTGTTGATGAGGGTTTAAGCGTA AAGATACATGGTAAAAACATGATACCCGAAAACGGAGAGCTCTCGATAGATAGGGTCTTCGAGCCAGTAGCTAAATTCAT TGGCAGGGAGACCCTGCCTCCATGGCAAAGCATTGGGGAGGTGAAAACCGAGCCTCCGATTCCACCACGCCCTCCAGTGC TTTGTGCTGGGTGTCCTCATAGAAGTACTTATTACATAGTTAAAACAGCCCTTAACAAGGCTGGTATAAGAAATACTGTG TTTACCGGCGATATTGGGTGTTATACACTAGGGTACCAAAAACCATTTGAAACACAGATGACGTGCTTCGAGATGGGTGG AAGCCTAGGCATAGCCCATGGATTCGGAAAAGTATTAGAGAATACAGTGATAGCTGTTATAGGAGACTCTACATTCTTTC ACGCCGGTATACCCCCGGTATTAAACATAGTTTACAATGACTCCAAGGTCATACCATTAATACTCGATAACTCAACAACA GCTATGACTGGACATCAGCCGCATCCAGGTACTGGGATAACAGCGATGGGGTTGCGGACAACGGCTATACTCCCGGAGAA GATATTGGAGCAGGCTGGGTTTAAAACTATCGTTATTAATCCATTAAGGGTTAAAGAATCAATAGAATTACTTACACAGG CTTTCAAAGAGTACTTGAAGGGTGAGCGAATAGCAATAGTTTCACGTATGAGATGCGCTCTCGAAGTCGCGAGGGATGCT AGAAGGAAGCAGGTAGTACTACCCATTTATACCATCGTTGAAGACAAGTGCATTGGGTGTATGGCATGCGTTAACTTAAC GGCCTGTCCAGCTATAATAGTGCCAGCAGGATCGAAGAAGCCCATTATACTAGAAGAGCTCTGCAATGGGTGTGGACTAT GTGCGTCTATCTGTCCCTATAAAGCGATAACTGTTAAAAACACTCCGAGCCCTGAGTGGGAGAAACTCTGGTGA
Upstream 100 bases:
>100_bases CAGGATTACATAGGGTTAAAAATAGGGTCATGCATGAGAATATATGTAGTTTATAGTATATATACTAGTACATACCATAC ATAAGATAGTGGTGCGGGTC
Downstream 100 bases:
>100_bases TGCAGTATGAAGACCAGGTTTAATCTAGTGTTATCCGGCGTAGGGGGTCAGGGTATAATAACGCTAGGCAGGTTAATAGG GCTGGGATGCATGCATGCAG
Product: Indolepyruvate oxidoreductase subunit iorA
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MSYILSGKGEKVLLMGNEAIARAALEAGICVATAYPGTPSTEIIETLSEVAGKCGIYVEWSINEKVAFETAYAAAITGVR SITAMKHVGVNVAADILMSSAYSGVKEGFVVVSADDPGEHSSQNEQDNRWYGLLAHIPVIEPSSARDSYYLTKEAFELSS RYEHPVILRTTTRVSHTRQPVELNGDIPSEKKCKGVFDKNYERWVLVPANARKQKTRMMKIWEAIRRNEGREPFIYVWNP GRSKVVIASGISYSHAEEALRLLDALNDVTLIKVSLPVPLPPTPITTVLKDAKEVLVIEELDPVVETQVKDIAVDEGLSV KIHGKNMIPENGELSIDRVFEPVAKFIGRETLPPWQSIGEVKTEPPIPPRPPVLCAGCPHRSTYYIVKTALNKAGIRNTV FTGDIGCYTLGYQKPFETQMTCFEMGGSLGIAHGFGKVLENTVIAVIGDSTFFHAGIPPVLNIVYNDSKVIPLILDNSTT AMTGHQPHPGTGITAMGLRTTAILPEKILEQAGFKTIVINPLRVKESIELLTQAFKEYLKGERIAIVSRMRCALEVARDA RRKQVVLPIYTIVEDKCIGCMACVNLTACPAIIVPAGSKKPIILEELCNGCGLCASICPYKAITVKNTPSPEWEKLW
Sequences:
>Translated_637_residues MSYILSGKGEKVLLMGNEAIARAALEAGICVATAYPGTPSTEIIETLSEVAGKCGIYVEWSINEKVAFETAYAAAITGVR SITAMKHVGVNVAADILMSSAYSGVKEGFVVVSADDPGEHSSQNEQDNRWYGLLAHIPVIEPSSARDSYYLTKEAFELSS RYEHPVILRTTTRVSHTRQPVELNGDIPSEKKCKGVFDKNYERWVLVPANARKQKTRMMKIWEAIRRNEGREPFIYVWNP GRSKVVIASGISYSHAEEALRLLDALNDVTLIKVSLPVPLPPTPITTVLKDAKEVLVIEELDPVVETQVKDIAVDEGLSV KIHGKNMIPENGELSIDRVFEPVAKFIGRETLPPWQSIGEVKTEPPIPPRPPVLCAGCPHRSTYYIVKTALNKAGIRNTV FTGDIGCYTLGYQKPFETQMTCFEMGGSLGIAHGFGKVLENTVIAVIGDSTFFHAGIPPVLNIVYNDSKVIPLILDNSTT AMTGHQPHPGTGITAMGLRTTAILPEKILEQAGFKTIVINPLRVKESIELLTQAFKEYLKGERIAIVSRMRCALEVARDA RRKQVVLPIYTIVEDKCIGCMACVNLTACPAIIVPAGSKKPIILEELCNGCGLCASICPYKAITVKNTPSPEWEKLW >Mature_636_residues SYILSGKGEKVLLMGNEAIARAALEAGICVATAYPGTPSTEIIETLSEVAGKCGIYVEWSINEKVAFETAYAAAITGVRS ITAMKHVGVNVAADILMSSAYSGVKEGFVVVSADDPGEHSSQNEQDNRWYGLLAHIPVIEPSSARDSYYLTKEAFELSSR YEHPVILRTTTRVSHTRQPVELNGDIPSEKKCKGVFDKNYERWVLVPANARKQKTRMMKIWEAIRRNEGREPFIYVWNPG RSKVVIASGISYSHAEEALRLLDALNDVTLIKVSLPVPLPPTPITTVLKDAKEVLVIEELDPVVETQVKDIAVDEGLSVK IHGKNMIPENGELSIDRVFEPVAKFIGRETLPPWQSIGEVKTEPPIPPRPPVLCAGCPHRSTYYIVKTALNKAGIRNTVF TGDIGCYTLGYQKPFETQMTCFEMGGSLGIAHGFGKVLENTVIAVIGDSTFFHAGIPPVLNIVYNDSKVIPLILDNSTTA MTGHQPHPGTGITAMGLRTTAILPEKILEQAGFKTIVINPLRVKESIELLTQAFKEYLKGERIAIVSRMRCALEVARDAR RKQVVLPIYTIVEDKCIGCMACVNLTACPAIIVPAGSKKPIILEELCNGCGLCASICPYKAITVKNTPSPEWEKLW
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 69785; Mature: 69654
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYILSGKGEKVLLMGNEAIARAALEAGICVATAYPGTPSTEIIETLSEVAGKCGIYVEW CCEEECCCCCEEEEECCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE SINEKVAFETAYAAAITGVRSITAMKHVGVNVAADILMSSAYSGVKEGFVVVSADDPGEH ECCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCC SSQNEQDNRWYGLLAHIPVIEPSSARDSYYLTKEAFELSSRYEHPVILRTTTRVSHTRQP CCCCCCCCCEEEEEEECCEECCCCCCCCEEEHHHHHHHHHCCCCCEEEEEECHHHHCCCC VELNGDIPSEKKCKGVFDKNYERWVLVPANARKQKTRMMKIWEAIRRNEGREPFIYVWNP EEECCCCCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECC GRSKVVIASGISYSHAEEALRLLDALNDVTLIKVSLPVPLPPTPITTVLKDAKEVLVIEE CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHCHHHEEEEHH LDPVVETQVKDIAVDEGLSVKIHGKNMIPENGELSIDRVFEPVAKFIGRETLPPWQSIGE CCHHHHHHHHHHEECCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHCC VKTEPPIPPRPPVLCAGCPHRSTYYIVKTALNKAGIRNTVFTGDIGCYTLGYQKPFETQM CCCCCCCCCCCCEEECCCCCCCEEEEEEEHHHCCCCCCCEEECCCCEEEECCCCCCHHHH TCFEMGGSLGIAHGFGKVLENTVIAVIGDSTFFHAGIPPVLNIVYNDSKVIPLILDNSTT HHHHCCCCEEEHHHHHHHHCCCEEEEEECCCEEECCCCHHEEEEECCCEEEEEEECCCCE AMTGHQPHPGTGITAMGLRTTAILPEKILEQAGFKTIVINPLRVKESIELLTQAFKEYLK EECCCCCCCCCCEEEECCCHHHHCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHC GERIAIVSRMRCALEVARDARRKQVVLPIYTIVEDKCIGCMACVNLTACPAIIVPAGSKK CCEEEHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC PIILEELCNGCGLCASICPYKAITVKNTPSPEWEKLW CEEHHHHCCCCCHHHHHCCCEEEEECCCCCCCHHCCC >Mature Secondary Structure SYILSGKGEKVLLMGNEAIARAALEAGICVATAYPGTPSTEIIETLSEVAGKCGIYVEW CEEECCCCCEEEEECCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE SINEKVAFETAYAAAITGVRSITAMKHVGVNVAADILMSSAYSGVKEGFVVVSADDPGEH ECCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCC SSQNEQDNRWYGLLAHIPVIEPSSARDSYYLTKEAFELSSRYEHPVILRTTTRVSHTRQP CCCCCCCCCEEEEEEECCEECCCCCCCCEEEHHHHHHHHHCCCCCEEEEEECHHHHCCCC VELNGDIPSEKKCKGVFDKNYERWVLVPANARKQKTRMMKIWEAIRRNEGREPFIYVWNP EEECCCCCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECC GRSKVVIASGISYSHAEEALRLLDALNDVTLIKVSLPVPLPPTPITTVLKDAKEVLVIEE CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHCHHHEEEEHH LDPVVETQVKDIAVDEGLSVKIHGKNMIPENGELSIDRVFEPVAKFIGRETLPPWQSIGE CCHHHHHHHHHHEECCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHCC VKTEPPIPPRPPVLCAGCPHRSTYYIVKTALNKAGIRNTVFTGDIGCYTLGYQKPFETQM CCCCCCCCCCCCEEECCCCCCCEEEEEEEHHHCCCCCCCEEECCCCEEEECCCCCCHHHH TCFEMGGSLGIAHGFGKVLENTVIAVIGDSTFFHAGIPPVLNIVYNDSKVIPLILDNSTT HHHHCCCCEEEHHHHHHHHCCCEEEEEECCCEEECCCCHHEEEEECCCEEEEEEECCCCE AMTGHQPHPGTGITAMGLRTTAILPEKILEQAGFKTIVINPLRVKESIELLTQAFKEYLK EECCCCCCCCCCEEEECCCHHHHCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHC GERIAIVSRMRCALEVARDARRKQVVLPIYTIVEDKCIGCMACVNLTACPAIIVPAGSKK CCEEEHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC PIILEELCNGCGLCASICPYKAITVKNTPSPEWEKLW CEEHHHHCCCCCHHHHHCCCEEEEECCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]