| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883672
Identifier: 218883672
GI number: 218883672
Start: 336016
End: 336660
Strand: Direct
Name: 218883672
Synonym: DKAM_0361
Alternate gene names: NA
Gene position: 336016-336660 (Clockwise)
Preceding gene: 218883668
Following gene: 218883674
Centisome position: 24.61
GC content: 45.27
Gene sequence:
>645_bases ATGCCGGCTGGAGAGAGAAAGCCCCGTTCCAGGAAGCTTACTGATTTCATGGTTCCCAGGGATAAAGACCGGGTGAGCGG GGAAACCAGTGGTTCCATAGATACCGTGAAATCCGCTGAGGGACATGCCATCCCTCAAAATAATATGAGCAGCCTCGATG AAATAAAGGAGATCATCCTGAGGAAGGCAAAGTCATCTAGGATGACTGAGAAGAAGCCTGAGACACAGGAGCCCAGCTTA AATAATAATGGGAAGCTTATGGAAATAATCAAGATCATATCATCCTCTAAACTAGTTAGAACCATAGAGTGTAACCAGCA GGGTATATGTAATGATGGGAGGAGGATTGGCGAGATCTTCACCGACGAATACGGGATTAAGCGTCAAAGAGGCTTCATCA ACACTACCCGTTTACCTATATTCCTAGACTTAATCGTTGAGGAGGCGGAAGCCATGCCTGCACTTAGGGATAAAGCATAT ATCGTTAAGACAAAGAGAGGGTCTTTAGCACTGGTGCCAGATGACTTTATATGTGAGCTGAATTCACGATATGGTATTAT AATACCAGCCATAGAGAAATGCGTTAACTACAAGAGTGGCCCGTGGATAGATAGGGGTAGGGGTACCAGGAGGAAAAATG CATGA
Upstream 100 bases:
>100_bases TGGTTTTTAAATATTTTACGGTCTTCAGTACTAATAGACTCGCCGAGCACTCGTGTTTAAATATTTGTTGTCCCGTGGAT AGTGTTTTGAGGATAGAAAC
Downstream 100 bases:
>100_bases TTAAAAAACAGCCAGGATAGGGCTTAAGTGGTTACCTTGTATAGGGTTCCTTCTACATCTACATCCATCAGCCTTGGGGT TCTTCTACGGCGTCTACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPAGERKPRSRKLTDFMVPRDKDRVSGETSGSIDTVKSAEGHAIPQNNMSSLDEIKEIILRKAKSSRMTEKKPETQEPSL NNNGKLMEIIKIISSSKLVRTIECNQQGICNDGRRIGEIFTDEYGIKRQRGFINTTRLPIFLDLIVEEAEAMPALRDKAY IVKTKRGSLALVPDDFICELNSRYGIIIPAIEKCVNYKSGPWIDRGRGTRRKNA
Sequences:
>Translated_214_residues MPAGERKPRSRKLTDFMVPRDKDRVSGETSGSIDTVKSAEGHAIPQNNMSSLDEIKEIILRKAKSSRMTEKKPETQEPSL NNNGKLMEIIKIISSSKLVRTIECNQQGICNDGRRIGEIFTDEYGIKRQRGFINTTRLPIFLDLIVEEAEAMPALRDKAY IVKTKRGSLALVPDDFICELNSRYGIIIPAIEKCVNYKSGPWIDRGRGTRRKNA >Mature_213_residues PAGERKPRSRKLTDFMVPRDKDRVSGETSGSIDTVKSAEGHAIPQNNMSSLDEIKEIILRKAKSSRMTEKKPETQEPSLN NNGKLMEIIKIISSSKLVRTIECNQQGICNDGRRIGEIFTDEYGIKRQRGFINTTRLPIFLDLIVEEAEAMPALRDKAYI VKTKRGSLALVPDDFICELNSRYGIIIPAIEKCVNYKSGPWIDRGRGTRRKNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24152; Mature: 24021
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGERKPRSRKLTDFMVPRDKDRVSGETSGSIDTVKSAEGHAIPQNNMSSLDEIKEIIL CCCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHH RKAKSSRMTEKKPETQEPSLNNNGKLMEIIKIISSSKLVRTIECNQQGICNDGRRIGEIF HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH TDEYGIKRQRGFINTTRLPIFLDLIVEEAEAMPALRDKAYIVKTKRGSLALVPDDFICEL HHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCHHHCCCEEEEEECCCCEEECCCHHHEEE NSRYGIIIPAIEKCVNYKSGPWIDRGRGTRRKNA CCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAGERKPRSRKLTDFMVPRDKDRVSGETSGSIDTVKSAEGHAIPQNNMSSLDEIKEIIL CCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHH RKAKSSRMTEKKPETQEPSLNNNGKLMEIIKIISSSKLVRTIECNQQGICNDGRRIGEIF HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH TDEYGIKRQRGFINTTRLPIFLDLIVEEAEAMPALRDKAYIVKTKRGSLALVPDDFICEL HHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCHHHCCCEEEEEECCCCEEECCCHHHEEE NSRYGIIIPAIEKCVNYKSGPWIDRGRGTRRKNA CCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA