| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883660
Identifier: 218883660
GI number: 218883660
Start: 320380
End: 321783
Strand: Direct
Name: 218883660
Synonym: DKAM_0349
Alternate gene names: NA
Gene position: 320380-321783 (Clockwise)
Preceding gene: 218883659
Following gene: 218883661
Centisome position: 23.47
GC content: 46.08
Gene sequence:
>1404_bases ATGGGTAAGCTATTCGAGCACATCATAGGCAGCTATCTTCCCCAGGCCAGGTGGTGGCCCTGGAAGAATACCAGGGTAAA TGTAGAGGTCGTGGATGAGGTAAACTACGGTAACGTATTGCTATTATTTTTTAGATCAGGAGACATATTTTTTCACCTAC CCCTGGCGAAAGTCAGTGAACTGCCAGGGGGTTTGGAGTCACGTGGATTCTGCCTCGATAATGAATGTTATGTAGAGGCA GAGTATCTTTCCTCCTACATGGACCTCATAAGTATGATTCAAGGTGTCTCGATAGAGTATCACAGGTCGAATAGGCTACC CAAGATAGTTAAGGCTAAACCCCTCACGTTTGAGTCAACGAACTCGGTTACCCTTTATGAGGCGGAGAATGGCGGCAAGC TTGTTTTAAAAAGCTATAGAGTAATACCGGTGGTCAACATTGAGGCACAGATGCTGAGGAAACTTACTGAAGAGAAGTAC GCTCATATCCCCGAGATTATTGCGTTCTTGAAGTATAAGGATATGACCACCGGTGTACTTTCAAGGTATGTAGAGGGGGC CGGTGATGGCGGCTATCCCTTCTACAACGCATTATTAGAGTACTTGGGTAGTAAGGTTCGTGGGTCTAGGCTCGGGCTCG CCTCGAAGCTCGGTATTATTATTTCAGGTCTTCACAAAGCCTTGAATAAGGATAGTGAAGGCTTCTTCAGCGTTGAGCCG GCTTCAAGTAATGATATTAAACAGTGGTGTTCACGCATCGAGAAAATGTACTCAGGAAGCCTGAAGAGATTGGATGAGAT AAATACAGGGGGACTGGATTACTGGCGTGGTATGCTTGAGAAGGCCCGGGACATAGTGGAGGATGCTATATCACTGCTTG AGGTCTACAATGGTTTATCGAAGGCTAGGATACATCAAGACCTGCATCTTGGGCAGATGATATATGTTAAAAACATAGCG GAGGACTTCATCATAGTTGACTTCGAGGGGGAGCCTGGTAGGAGTATCGAGGAGAGACTGTCAAAGGAGCCTGTGACAAG GGATGTGGCGTCGATGATAAGGAGCTTCCACTATCTCTCACACGCCGCAATAATGCATTACAGTGGTAGAAGCCAGGATG AGGTTTCACGTTTAATGATCGAGGATGATCCTTCTACTAAGTGGAGGCTTAACCATGTAAAGGCAATGGTTTACTCCTAC TCAATGGATATCGACTCAAGTAAACTACTTGGAGTACCTAGGGATAAAATGGTCTCCGAGATAGGGAGGCTCCTTTACCC ATGGATCATTGAGAGGGCTGTTTACGAGGTCTACTATGAGTCCCTCTATAGGCCCAACTGGGTCTCCATACCTATAGCCG GCTTATATGAAGCAAGTAGGATCTATAGGGGGTGGATTATTTGA
Upstream 100 bases:
>100_bases TCTATCTACTTGAAAACAACATTGTTAAAAACGTGGATGACTTGAGAGAATATTTATCCATGATATTGAAAACCATAGAG GGTTAGAATAGGCGTTTAAA
Downstream 100 bases:
>100_bases CCGATATAGTCTTAATGTTCGAGGTCCATCAACCATATAGGTTAAGGAGAAATCTTCACTCAATACTGCTTGAAAAAGCA TTGAGCGGTAGACTTGAGTT
Product: alpha amylase
Products: NA
Alternate protein names: Aminoglycoside Phosphotransferase; Alpha Amylase Domain-Containing Protein; Trehalose Synthase-Like; Pep2 Protein; Trehalose Synthase/ Maltokinase; Alpha Amylase Catalytic Region; Sugar Phosphotransferase; Trehalose Synthase/Maltokinase; Trehalose Synthase-Fused Maltokinase-Like Protein; Alpha-Glucosidase; Alpha Amylase; 1 4-Alpha-Glucan Branching; Trehalose Synthase-Like Protein; Trehalose Synthase-Fused Maltokinase; Alpha Amylase/Trehalose Synthase; Bifunctional Trehalose/Maltose Transglucosylase/Maltokinase; Glycogen Branching; 4-Alpha-Glucanotransferase; Domain Involved In Trehalose Biosynthesis; Glycoside Hydrolase Family Protein; Trehalose Synthase-Fused Maltokinase; Trehalose Synthas; Alpha-Amylase Family Protein; Protein Probably Involved In Trehalose Biosynthesis; Maltokinase; Trehalose Synthase Protein; Trehalose Synthase Maltokinase Fusion Protein; Trehalose Synthase Maltose Alpha-D-Glucosyltransferase; Alpha-1 4-GlucanAlpha-1 4-Glucan 6-Glycosyltransferase; Trehalose Synthase/Glycosidase Fusion Protein; Alpha Amylase Catalytic Domain Subfamily; Phosphotransferase Family Protein; Trehalose Synthase/ Maltokinase-Like; Alpha Amylase Catalytic Subdomain
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MGKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSELPGGLESRGFCLDNECYVEA EYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFESTNSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKY AHIPEIIAFLKYKDMTTGVLSRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLSKARIHQDLHLGQMIYVKNIA EDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLSHAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSY SMDIDSSKLLGVPRDKMVSEIGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII
Sequences:
>Translated_467_residues MGKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSELPGGLESRGFCLDNECYVEA EYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFESTNSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKY AHIPEIIAFLKYKDMTTGVLSRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLSKARIHQDLHLGQMIYVKNIA EDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLSHAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSY SMDIDSSKLLGVPRDKMVSEIGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII >Mature_466_residues GKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSELPGGLESRGFCLDNECYVEAE YLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFESTNSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKYA HIPEIIAFLKYKDMTTGVLSRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEPA SSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLSKARIHQDLHLGQMIYVKNIAE DFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLSHAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSYS MDIDSSKLLGVPRDKMVSEIGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII
Specific function: Unknown
COG id: COG3281
COG function: function code G; Uncharacterized protein, probably involved in trehalose biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53462; Mature: 53331
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSE CCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEECHHHHHH LPGGLESRGFCLDNECYVEAEYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFEST CCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCCEEECC NSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKYAHIPEIIAFLKYKDMTTGVL CCEEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECC ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLS CCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KARIHQDLHLGQMIYVKNIAEDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLS HHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH HAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSYSMDIDSSKLLGVPRDKMVSE HHHHEEECCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHH IGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCC >Mature Secondary Structure GKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSE CHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEECHHHHHH LPGGLESRGFCLDNECYVEAEYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFEST CCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCCEEECC NSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKYAHIPEIIAFLKYKDMTTGVL CCEEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECC ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLS CCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH KARIHQDLHLGQMIYVKNIAEDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLS HHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH HAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSYSMDIDSSKLLGVPRDKMVSE HHHHEEECCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHH IGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA