| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883622
Identifier: 218883622
GI number: 218883622
Start: 287304
End: 287876
Strand: Reverse
Name: 218883622
Synonym: DKAM_0311
Alternate gene names: NA
Gene position: 287876-287304 (Counterclockwise)
Preceding gene: 218883623
Following gene: 218883621
Centisome position: 21.09
GC content: 68.76
Gene sequence:
>573_bases ATGCAAAGTGAGCTCTACGCGGAGCGGTACTTCCAGAGGCGGCGCGCCAAGGTGGACGCGAGCGAGTGGCTCGACATCGA GCTCGCGCTGAAGGTCGCGGGCGTGAGGAAGCGAGTCCACCGGATCCTCGACGTGGGCGGCGGCACGGGGGAGCTCGCTA GGTGGCTGAGGGGGAGGGGCTGGCTCGCGGATTACTGCGACCCCCACGCCCCGGGTGCGCCGCCCTGCTCGCTCCCAAGC GACGTGCCGCAGGCGGACGCCTACGTGCTCCAGCACGTCCTCGAGCACGTGGAGGATCCGTACGGTGCCGTGGCATCGCT CCTCGACAGGAGACCCCTAGCGGTCGTGGCGGTTCTCCCAGGTCACTTCGTCGAGGACGAGACGCACGTCTGCAACCACT TCCGCCCCAGCGCCCTCCCCGCATACCGCGGGCTGTGGGGGGGGAGCGAGGATGTGCTCCCTAGAGCGGCTGGTCGCCGA GGCTGTCTCCCGCGGCTACCAGACCGCGTGGACCGTGGACAGAATGTCGCTCCTCAGACCTTGGGATCTCGACTACGTGT TCGTCGCGGCTAA
Upstream 100 bases:
>100_bases AGGAGGCAGTACCTGAAGGCGTGGATCCGCTACGTCGTGCTACGCGAGGCTAGGAGGATCCGCGGGAGGGTTCCAGACGT GTGCGAGGTCGTGCTCAGCC
Downstream 100 bases:
>100_bases AAAGGTGAGGAAGTGGAGGCTGAGGGCGCGGCTCTACGCGGTCTGGCTACTAGCGAGGATCCTCCTTTCCAGATGAAATT TTTTAGAAAAGGAGATCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRGWLADYCDPHAPGAPPCSLPS DVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLPGHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRR GCLPRLPDRVDRGQNVAPQTLGSRLRVRRG
Sequences:
>Translated_190_residues MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRGWLADYCDPHAPGAPPCSLPS DVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLPGHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRR GCLPRLPDRVDRGQNVAPQTLGSRLRVRRG >Mature_190_residues MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRGWLADYCDPHAPGAPPCSLPS DVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLPGHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRR GCLPRLPDRVDRGQNVAPQTLGSRLRVRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21109; Mature: 21109
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRG CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC WLADYCDPHAPGAPPCSLPSDVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECC GHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRRGCLPRLPDRVDRGQNVAPQT CCCCCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHH LGSRLRVRRG HHHHHHCCCC >Mature Secondary Structure MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRG CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC WLADYCDPHAPGAPPCSLPSDVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECC GHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRRGCLPRLPDRVDRGQNVAPQT CCCCCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHH LGSRLRVRRG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA