| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is yvgL [H]
Identifier: 218883528
GI number: 218883528
Start: 201900
End: 202772
Strand: Reverse
Name: yvgL [H]
Synonym: DKAM_0217
Alternate gene names: 218883528
Gene position: 202772-201900 (Counterclockwise)
Preceding gene: 218883529
Following gene: 218883527
Centisome position: 14.85
GC content: 42.15
Gene sequence:
>873_bases ATGAAGCCTACGTCTAAGACAATAGTTTTAAGCATGATACTACTGCTTTTAGTGGTATCCTCATGGATTATCTACACGTA TTACTCACAGAGTCCCGCCCAGGTGGTGCTCTTAGTCTATACTCCCCCAGTGGTTCAACCATTACTGAATAACGCTTCAA GGGAATACATGCAACTACATCCGAATGTTAGAATCGAGATCATTGGAGGTGCTACCGGGACATTATTAAATAAGATATTA TTGACTGGTGAAGGAGACGTCTTCGTCACAGCGGATCACGAGTACATGTTAAATGCCTCAAGAATGGGGCTCGTAGTGAA CGAGTCGATTAAGGTACTCTCATATGTAGTATTAGCACTCATAATCCCCAAGGATAACCCGGCAAATATCACTAGCCTGG ATGACTTAGTATCAAAGGATGTGAAAATAGGCATAGCTAACCCGAGCGTGGCTCCCTTCGGTAGAATGGCTGTAGAACTA CTTGTCAAAAACGGTATCTACGATAAAGTAAAAGACAAGCTAGTGATCTATGGAGATGTAGGGCAGACAGCTAGGCAGGT CGCATTAGGACTCGTAGATGTTGCAATACTTCCACATGTAGCGCATTACTGGTACTTGAATGATACAAGTATAATCTGGC TTAATCCAGCACAGCTACCGTTGATGAGTTGTCAAATGATTGCAGTACTCAACACCACTAAAAACTATCAGGCAGCACTA GAATTTGTGGAGTTCCTTGTAGAGTATGTTAGATTCAATCCATACCCCTTGGAGAATGGATATGTAGGGGACCTCGATAA GATATCCTCTATAACTCCTTATAGACTCGAAGAGCTATTGTTTAATAATGCTTGCATGGGGTATGTGAAGTGA
Upstream 100 bases:
>100_bases ACCGTGGATAGCGGCCGGTGTAAAAATCCCGAGGGAGTATCTGATCTCATTTGGTGAGGGAGGGTTGTCCGAGTACTTTC TACGAAGGCGGTGAGACATT
Downstream 100 bases:
>100_bases GGGTGTTCCTCCTCCTGCTTATACTGCTACTAGTCCTTGATGCCACGATATTTGCAACCCCTATATATATGGCTATATGG CAAGGGATCCTTGTACCGGG
Product: molybdenum ABC transporter, periplasmic molybdate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKPTSKTIVLSMILLLLVVSSWIIYTYYSQSPAQVVLLVYTPPVVQPLLNNASREYMQLHPNVRIEIIGGATGTLLNKIL LTGEGDVFVTADHEYMLNASRMGLVVNESIKVLSYVVLALIIPKDNPANITSLDDLVSKDVKIGIANPSVAPFGRMAVEL LVKNGIYDKVKDKLVIYGDVGQTARQVALGLVDVAILPHVAHYWYLNDTSIIWLNPAQLPLMSCQMIAVLNTTKNYQAAL EFVEFLVEYVRFNPYPLENGYVGDLDKISSITPYRLEELLFNNACMGYVK
Sequences:
>Translated_290_residues MKPTSKTIVLSMILLLLVVSSWIIYTYYSQSPAQVVLLVYTPPVVQPLLNNASREYMQLHPNVRIEIIGGATGTLLNKIL LTGEGDVFVTADHEYMLNASRMGLVVNESIKVLSYVVLALIIPKDNPANITSLDDLVSKDVKIGIANPSVAPFGRMAVEL LVKNGIYDKVKDKLVIYGDVGQTARQVALGLVDVAILPHVAHYWYLNDTSIIWLNPAQLPLMSCQMIAVLNTTKNYQAAL EFVEFLVEYVRFNPYPLENGYVGDLDKISSITPYRLEELLFNNACMGYVK >Mature_290_residues MKPTSKTIVLSMILLLLVVSSWIIYTYYSQSPAQVVLLVYTPPVVQPLLNNASREYMQLHPNVRIEIIGGATGTLLNKIL LTGEGDVFVTADHEYMLNASRMGLVVNESIKVLSYVVLALIIPKDNPANITSLDDLVSKDVKIGIANPSVAPFGRMAVEL LVKNGIYDKVKDKLVIYGDVGQTARQVALGLVDVAILPHVAHYWYLNDTSIIWLNPAQLPLMSCQMIAVLNTTKNYQAAL EFVEFLVEYVRFNPYPLENGYVGDLDKISSITPYRLEELLFNNACMGYVK
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 32239; Mature: 32239
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTSKTIVLSMILLLLVVSSWIIYTYYSQSPAQVVLLVYTPPVVQPLLNNASREYMQLH CCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHHHHHCCCHHHHHHCC PNVRIEIIGGATGTLLNKILLTGEGDVFVTADHEYMLNASRMGLVVNESIKVLSYVVLAL CCEEEEEECCCHHHHHHHHEEECCCCEEEEECCHHEECHHHCCEEECHHHHHHHHHHHHH IIPKDNPANITSLDDLVSKDVKIGIANPSVAPFGRMAVELLVKNGIYDKVKDKLVIYGDV EECCCCCCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEEECC GQTARQVALGLVDVAILPHVAHYWYLNDTSIIWLNPAQLPLMSCQMIAVLNTTKNYQAAL CHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHEEEEEEECCCHHHHHH EFVEFLVEYVRFNPYPLENGYVGDLDKISSITPYRLEELLFNNACMGYVK HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKPTSKTIVLSMILLLLVVSSWIIYTYYSQSPAQVVLLVYTPPVVQPLLNNASREYMQLH CCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCHHHHHHHCCCHHHHHHCC PNVRIEIIGGATGTLLNKILLTGEGDVFVTADHEYMLNASRMGLVVNESIKVLSYVVLAL CCEEEEEECCCHHHHHHHHEEECCCCEEEEECCHHEECHHHCCEEECHHHHHHHHHHHHH IIPKDNPANITSLDDLVSKDVKIGIANPSVAPFGRMAVELLVKNGIYDKVKDKLVIYGDV EECCCCCCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEEECC GQTARQVALGLVDVAILPHVAHYWYLNDTSIIWLNPAQLPLMSCQMIAVLNTTKNYQAAL CHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHHHEEEEEEECCCHHHHHH EFVEFLVEYVRFNPYPLENGYVGDLDKISSITPYRLEELLFNNACMGYVK HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]