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The map label for this gene is 218534720

Identifier: 218534720

GI number: 218534720

Start: 1580

End: 1993

Strand: Direct

Name: 218534720

Synonym: Mchl_5739

Alternate gene names: NA

Gene position: 1580-1993 (Clockwise)

Preceding gene: 218534719

Following gene: 218534721

Centisome position: 6.99

GC content: 62.08

Gene sequence:

>414_bases
ATGTCTGACGCTCGCCTTATCAAGACCGAAGCTGAGTATAAGGCCGCAATGGAGGAGATTGATGCGCTGTTCGCCAATCT
TCCCGAGCCGGGTACTCCCGAGGGCGATCGGTTCGAGTTCTTGTCCCTCCTGATCTCCCATTACGAAGACCAGCACTTCC
CGATCCCCGAAGCGGACCCGGTGGACCTTCTGCGGTTCGCCATCACAGACATGGGCCGGTCTCAGACGGAGCTTGCGGAG
CTGCTTGGTTCGCGTCCTCGCGCGTCCGAAGTCATGAACCGGAAGCGGGCTCTGACGCTCGACATGATCCGGGGCATCAG
CGCGGCCTGGAAGCTTCCCTTCGAAGCGCTGGCGGCTCCGTACACAGTGAAGCGTGCGCCGCGTTCGTCGGCACGGCGGC
AAGCGCTAACCTGA

Upstream 100 bases:

>100_bases
GTTCGTCGGCACTCACGCCGAATATGACTTGATCGATGTCGTTACCGTTGGGAACCCAAACGAGAAACAGGAACGCAAGC
GGAAAGGAAAGGGTTAGGCC

Downstream 100 bases:

>100_bases
TCTCTTCCACGCTCGGCGGCGCTTGTTGGCCGGGCGAGGTTCCTTGCCACTCGACCGAAGCTGCCGCAGCAGTCTACGCA
GAAGCGTAGCCATTGGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Regulator With HTH Domain; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcription Regulator; Transcription Regulator With HTH Domain Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Xre Family; Transcription Regulator Containing HTH Domain; Transcription Regulator Protein; Transcritional Regulatior Protein; Transcription Regulator Containing Helix Turn Helix Domain; HTH_3 Family Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator YgjM; Transcriptional Regulator Protein; Transcription Regulator With HTH Domain-Containing Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSDARLIKTEAEYKAAMEEIDALFANLPEPGTPEGDRFEFLSLLISHYEDQHFPIPEADPVDLLRFAITDMGRSQTELAE
LLGSRPRASEVMNRKRALTLDMIRGISAAWKLPFEALAAPYTVKRAPRSSARRQALT

Sequences:

>Translated_137_residues
MSDARLIKTEAEYKAAMEEIDALFANLPEPGTPEGDRFEFLSLLISHYEDQHFPIPEADPVDLLRFAITDMGRSQTELAE
LLGSRPRASEVMNRKRALTLDMIRGISAAWKLPFEALAAPYTVKRAPRSSARRQALT
>Mature_136_residues
SDARLIKTEAEYKAAMEEIDALFANLPEPGTPEGDRFEFLSLLISHYEDQHFPIPEADPVDLLRFAITDMGRSQTELAEL
LGSRPRASEVMNRKRALTLDMIRGISAAWKLPFEALAAPYTVKRAPRSSARRQALT

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15389; Mature: 15258

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDARLIKTEAEYKAAMEEIDALFANLPEPGTPEGDRFEFLSLLISHYEDQHFPIPEADP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
VDLLRFAITDMGRSQTELAELLGSRPRASEVMNRKRALTLDMIRGISAAWKLPFEALAAP
HHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
YTVKRAPRSSARRQALT
HHHHHCCHHHHHHHCCC
>Mature Secondary Structure 
SDARLIKTEAEYKAAMEEIDALFANLPEPGTPEGDRFEFLSLLISHYEDQHFPIPEADP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
VDLLRFAITDMGRSQTELAELLGSRPRASEVMNRKRALTLDMIRGISAAWKLPFEALAAP
HHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
YTVKRAPRSSARRQALT
HHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA