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The map label for this gene is ygiQ [C]

Identifier: 218532951

GI number: 218532951

Start: 5432416

End: 5434482

Strand: Reverse

Name: ygiQ [C]

Synonym: Mchl_5075

Alternate gene names: 218532951

Gene position: 5434482-5432416 (Counterclockwise)

Preceding gene: 218532952

Following gene: 218532945

Centisome position: 94.06

GC content: 68.26

Gene sequence:

>2067_bases
ATGGAACTCCGAGCTTCAACTGAGCGATCCTTGGCTCCCGTAGCCCCCTTGGCTCCCGTGGCCCCCTTGGCCTGCAAACC
GCCCCCCGAAACGGCTGCGCCGTTCCTGCCGATGAGCCGCGCCGAGATGACGACGCTCGGGTGGGACGCCTGCGACATCG
TGCTGGTGACCGGTGACGCCTATGTGGATCATCCCAGCTTCGGCATGGCGATCATCGGCCGGCTGCTCGAAGCGCAGGGG
TTCCGGGTCGGCATCATCGCGCAGCCCGACTGGCAGTCGGCGGAGCCGTTCAAGGCCCTCGGCAAGCCGCGTTTGTTCTT
CGGCGTCACCGGCGGCAACCTCGATTCGATGGTGAACCGCTACACGGCGGACCGTCGCTTACGCCATGACGACGCCTACA
CGGCCGGCGGGGAAGGCGGGAAGCGCCCGGACCGCTCAACAATCGTCTACACGCAGCGCTGCCGCGAGGCCTACAAGGAC
GTGCCGATCGTGCTCGGCGGCATCGAGGCGTCGCTGCGCCGGATCGCCCACTACGATTACTGGTCCGACAAGGTGCGCCG
CTCGATCCTGGCGGACGCGAAAGCGGATCTGCTGCTCTACGGCAATGCCGAGCGCGCCGTGGTCGAGGTGGCGAACCGCC
TCGCGGCCGGCGAGGCGCCGCACGAACTCGAGTCGGTCCGGGGTGTGGCCCTGTTCCGCCGCGTGCCCGAGCATTACACC
GAGCTGCCCGCCGACGATCTCGACTCGACGGACGAGGCCGCCGCCCGCCGGCCCGGCGACACCGTGATCCGGCTCCCCGC
CTACGACGAGGTCAAGGACGACAAGGAGGCCTATGCCCGCGCCTCACGCGTGCTGCACCGCGAGGCCAATCCCGGCAACG
CGCGCCCGCTCGTCCAGCGCCACGGCGACCGCGACCTGTGGCTGAACCCGCCGCCGATCCCGCTGACCAGCGACGAGATG
GATGCGGTCTACGACCTGCCCTACGCGCGTGCGCCCCACCCGTCCTACGGCGACGCGAAGATCCCCGCCTGGGATATGAT
CAAGTTCTCGGTGACGATCATGCGCGGCTGCTTCGGCGGCTGCACCTTCTGCTCCATCACCGAGCACGAGGGCCGCGTCA
TCCAGAACCGCTCGGAGGGCTCGATCCTGCGCGAGATCGAGCGGATCCGCGACAAGACGCCGGGCTTCACCGGCGTGATC
TCGGATGTCGGCGGGCCGACCGCCAACATGTACCGGATGGCCTGCAAGGACCCGAAGATCGAGGCGGCGTGCCGGCTGCC
GTCCTGCGTCTTCCCGGACATCTGCCCCAACCTGAACACCTCGCACGACGACCTGATCCGGCTCTATCGCAAGGTCCGCG
AGGTGAAGGGCGTCAAGAAGGTGATGGTCGCCTCCGGCGTGCGCTACGACCTCGCGGTCCGAAGCCCCGAATACGTCGAG
GAGCTCGTGACCCACCATGTCGGCGGCCGTCTCAAGATCGCCCCCGAGCACACCGAGCGCGGTCCCCTCGACCTGATGAT
GAAGCCGGGGATCGGCACCTACGACCGCTTCAAGGAGATGTTCGACGCCGCCGCCAAGAAGGCCGGCAAGAAATACTACC
TGATCCCGTATTTCATCGCGGCGCATCCGGGCACGACCGACGAGGACATGCTGAACCTCGCGCTCTGGCTCAAGAAGAAC
GACTACCGCGCCGACCAGGTCCAGACCTTCCTGCCCTCGCCCATGGCGACGGCCACGACCATGTATCACACCGAGATCAA
CCCGCTGCAGGGCGTGCGCCGCGGCGGCAGCGAGCCGGTCGATGCGATCAAGGGCCTGCGGCAGCGCCGGCTGCACAAGG
CGTTCCTGCGCTACCACGATCCCGAGAACTGGCCCCTGCTTCGCGAGGCGCTGCGCGAGATGGGCCGCGCAGATCTGATC
GGGCCGAAGCCGGACCAGCTCGTGCCGTTCTCGCAACCGCCGGGAACGGGCTTAGGCGTGGGCAAGGGGCGAGGCCAGCC
GCGCCCCATACGCGCCGCGGGTGGCGGGCAGCGTTTCACCACGAAGGGCGTGCCGTTCAGAAAGTGA

Upstream 100 bases:

>100_bases
CCGGGCCCGCGCGTCGCAGCGGGTTCAGGATCGAGGGGCGACGGCCGGCCGCTCTTGCCCTTCGTTGAGCTCGCGGCCGT
GGCAGCTTATGGATAGCCTC

Downstream 100 bases:

>100_bases
CGGCCTCACGCGTCCGAGACGGTTTCCGGATGATCGCTTTCGGGAACCGTTGATTCCGCTCGCCCTGCGTCGGGGAGCAT
GGCGAGGCGGCAGCCGAAGG

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MELRASTERSLAPVAPLAPVAPLACKPPPETAAPFLPMSRAEMTTLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLEAQG
FRVGIIAQPDWQSAEPFKALGKPRLFFGVTGGNLDSMVNRYTADRRLRHDDAYTAGGEGGKRPDRSTIVYTQRCREAYKD
VPIVLGGIEASLRRIAHYDYWSDKVRRSILADAKADLLLYGNAERAVVEVANRLAAGEAPHELESVRGVALFRRVPEHYT
ELPADDLDSTDEAAARRPGDTVIRLPAYDEVKDDKEAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTSDEM
DAVYDLPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRVIQNRSEGSILREIERIRDKTPGFTGVI
SDVGGPTANMYRMACKDPKIEAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVKGVKKVMVASGVRYDLAVRSPEYVE
ELVTHHVGGRLKIAPEHTERGPLDLMMKPGIGTYDRFKEMFDAAAKKAGKKYYLIPYFIAAHPGTTDEDMLNLALWLKKN
DYRADQVQTFLPSPMATATTMYHTEINPLQGVRRGGSEPVDAIKGLRQRRLHKAFLRYHDPENWPLLREALREMGRADLI
GPKPDQLVPFSQPPGTGLGVGKGRGQPRPIRAAGGGQRFTTKGVPFRK

Sequences:

>Translated_688_residues
MELRASTERSLAPVAPLAPVAPLACKPPPETAAPFLPMSRAEMTTLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLEAQG
FRVGIIAQPDWQSAEPFKALGKPRLFFGVTGGNLDSMVNRYTADRRLRHDDAYTAGGEGGKRPDRSTIVYTQRCREAYKD
VPIVLGGIEASLRRIAHYDYWSDKVRRSILADAKADLLLYGNAERAVVEVANRLAAGEAPHELESVRGVALFRRVPEHYT
ELPADDLDSTDEAAARRPGDTVIRLPAYDEVKDDKEAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTSDEM
DAVYDLPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRVIQNRSEGSILREIERIRDKTPGFTGVI
SDVGGPTANMYRMACKDPKIEAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVKGVKKVMVASGVRYDLAVRSPEYVE
ELVTHHVGGRLKIAPEHTERGPLDLMMKPGIGTYDRFKEMFDAAAKKAGKKYYLIPYFIAAHPGTTDEDMLNLALWLKKN
DYRADQVQTFLPSPMATATTMYHTEINPLQGVRRGGSEPVDAIKGLRQRRLHKAFLRYHDPENWPLLREALREMGRADLI
GPKPDQLVPFSQPPGTGLGVGKGRGQPRPIRAAGGGQRFTTKGVPFRK
>Mature_688_residues
MELRASTERSLAPVAPLAPVAPLACKPPPETAAPFLPMSRAEMTTLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLEAQG
FRVGIIAQPDWQSAEPFKALGKPRLFFGVTGGNLDSMVNRYTADRRLRHDDAYTAGGEGGKRPDRSTIVYTQRCREAYKD
VPIVLGGIEASLRRIAHYDYWSDKVRRSILADAKADLLLYGNAERAVVEVANRLAAGEAPHELESVRGVALFRRVPEHYT
ELPADDLDSTDEAAARRPGDTVIRLPAYDEVKDDKEAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTSDEM
DAVYDLPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRVIQNRSEGSILREIERIRDKTPGFTGVI
SDVGGPTANMYRMACKDPKIEAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVKGVKKVMVASGVRYDLAVRSPEYVE
ELVTHHVGGRLKIAPEHTERGPLDLMMKPGIGTYDRFKEMFDAAAKKAGKKYYLIPYFIAAHPGTTDEDMLNLALWLKKN
DYRADQVQTFLPSPMATATTMYHTEINPLQGVRRGGSEPVDAIKGLRQRRLHKAFLRYHDPENWPLLREALREMGRADLI
GPKPDQLVPFSQPPGTGLGVGKGRGQPRPIRAAGGGQRFTTKGVPFRK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=652, Percent_Identity=63.4969325153374, Blast_Score=859, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 76377; Mature: 76377

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRASTERSLAPVAPLAPVAPLACKPPPETAAPFLPMSRAEMTTLGWDACDIVLVTGDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCC
YVDHPSFGMAIIGRLLEAQGFRVGIIAQPDWQSAEPFKALGKPRLFFGVTGGNLDSMVNR
EECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHH
YTADRRLRHDDAYTAGGEGGKRPDRSTIVYTQRCREAYKDVPIVLGGIEASLRRIAHYDY
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHCCH
WSDKVRRSILADAKADLLLYGNAERAVVEVANRLAAGEAPHELESVRGVALFRRVPEHYT
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ELPADDLDSTDEAAARRPGDTVIRLPAYDEVKDDKEAYARASRVLHREANPGNARPLVQR
HCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
HGDRDLWLNPPPIPLTSDEMDAVYDLPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGG
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
CTFCSITEHEGRVIQNRSEGSILREIERIRDKTPGFTGVISDVGGPTANMYRMACKDPKI
CEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCCCC
EAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVKGVKKVMVASGVRYDLAVRSPEYVE
HHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH
ELVTHHVGGRLKIAPEHTERGPLDLMMKPGIGTYDRFKEMFDAAAKKAGKKYYLIPYFIA
HHHHHHCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEE
AHPGTTDEDMLNLALWLKKNDYRADQVQTFLPSPMATATTMYHTEINPLQGVRRGGSEPV
CCCCCCHHHHHHHHHEEECCCCCHHHHHHHCCCCCHHHEEEEECCCCHHHHHHCCCCCHH
DAIKGLRQRRLHKAFLRYHDPENWPLLREALREMGRADLIGPKPDQLVPFSQPPGTGLGV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKGRGQPRPIRAAGGGQRFTTKGVPFRK
CCCCCCCCCEEECCCCCEEECCCCCCCC
>Mature Secondary Structure
MELRASTERSLAPVAPLAPVAPLACKPPPETAAPFLPMSRAEMTTLGWDACDIVLVTGDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCC
YVDHPSFGMAIIGRLLEAQGFRVGIIAQPDWQSAEPFKALGKPRLFFGVTGGNLDSMVNR
EECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHH
YTADRRLRHDDAYTAGGEGGKRPDRSTIVYTQRCREAYKDVPIVLGGIEASLRRIAHYDY
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHCCH
WSDKVRRSILADAKADLLLYGNAERAVVEVANRLAAGEAPHELESVRGVALFRRVPEHYT
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ELPADDLDSTDEAAARRPGDTVIRLPAYDEVKDDKEAYARASRVLHREANPGNARPLVQR
HCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
HGDRDLWLNPPPIPLTSDEMDAVYDLPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGG
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
CTFCSITEHEGRVIQNRSEGSILREIERIRDKTPGFTGVISDVGGPTANMYRMACKDPKI
CEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCCCC
EAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVKGVKKVMVASGVRYDLAVRSPEYVE
HHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH
ELVTHHVGGRLKIAPEHTERGPLDLMMKPGIGTYDRFKEMFDAAAKKAGKKYYLIPYFIA
HHHHHHCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEE
AHPGTTDEDMLNLALWLKKNDYRADQVQTFLPSPMATATTMYHTEINPLQGVRRGGSEPV
CCCCCCHHHHHHHHHEEECCCCCHHHHHHHCCCCCHHHEEEEECCCCHHHHHHCCCCCHH
DAIKGLRQRRLHKAFLRYHDPENWPLLREALREMGRADLIGPKPDQLVPFSQPPGTGLGV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKGRGQPRPIRAAGGGQRFTTKGVPFRK
CCCCCCCCCEEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]