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The map label for this gene is 218532935

Identifier: 218532935

GI number: 218532935

Start: 5411739

End: 5412941

Strand: Reverse

Name: 218532935

Synonym: Mchl_5058

Alternate gene names: NA

Gene position: 5412941-5411739 (Counterclockwise)

Preceding gene: 218532936

Following gene: 218532934

Centisome position: 93.68

GC content: 73.32

Gene sequence:

>1203_bases
ATGACGATGCAGCCCACGACCCGGCCGGATGGCCGCGTCGGCGATGCCGCCGACCTTCTGACCCGCGCGGCGGCCGCCGC
CGCGATCGCCGCCACCCATGCGGACGCGGTGGACCGCGACGGGCGCTTCCCCGAGGAAGCCGTCGCCGCCTTCCGCTCGC
AGCGCCTGCTCGGTGCGGCCGTGCCGATCGAACTCGGCGGGGAGGGCGCCTCGGTCCGGATGCTGGCCGAAATCTGCTAC
GTGCTGGGCCGCGCCTGCGCCTCCTCGGCGATGATCTTCGCCATGCACCAGACCAAGGTGGCCTGCCTGATCCGGCATGG
CCGCGGCGAGCCCTGGCAGGACGGCCTCCTGCGCCGCATCGCCGACGAACAGCTCCTGATGGCGTCCTCGACGACCGAGG
GCCAGGGTGGCGGCAATGTCCGCTCCTCGTCCGCGGCGATCGAGGCCGACGGCGATGCGGTCACCCTGGAGCGGGCCGCA
ACCGTCATCTCCTACGGCGCCCAGGCCGACGGCGTCGTCACCGTCGCCCGCCGCTCGGCCGAGGCCGGCCCCTCCGACCA
AGTGCTCTGCGTCTTCCTGCGTGAGGATTACACCCTGGAGCGCCTGAGCGGCTGGGAAACGCTCGGCATGCGCGGCACCT
GCAGCAGCGGCTTCCGCCTCGTCGCCCGCGGCCGTCCCGAGCAGGTGCTCGCTGCCCGCTACAGCGACATCCACAACCGG
ACCATGACGCCGGTCTCGCACATCCTTTGGTCGAGCGCCTGGACCGGCATCGCCGCCTCCGCCGTCGATTGCGCCCAGGC
CTTCACCCGCACGGCGATGCGCGGCGCGGGCGGCGTCGCCCCGCCCGGCGCGCTGCACTATGCGCGCGCCGTCTCCAGCC
TGAAGCAGGCCCGCGCCCTCGTCACGCAGGCGCTCGACACCTTCGAGGCGGCCGAGGGCGACCCGGCGGCTCTGGCCGGC
CTCGACGTGCAGACCGCGCTGACGATGCTCAAGGTCGAAGTCTCCGAACTCGCCGTCGCCACCGTGTGGAGCGCGCTGCG
CGCCAACGGGCTCGCCGGCTACCGCCAGGACGGCGCGTTCAGCATCGGCCGGGCGCTGCGCGACATCCTCTCGGCGCCGA
TCATGATCCACAACGACCGGATCCTGGCCAACCTCGCCACCGCGACGCTGATGTCGCCCGTCGCCGCCTCGCTCAGCGCC
TGA

Upstream 100 bases:

>100_bases
CCTGAGCGGCCAAGTCCGGATCGCCCAGACGCCGCCGTCCCTCACGAACATCCCTGACGTGCCGCCGGCCCGGCCGGCTT
CAGTCCAACGGAGCCCAGCC

Downstream 100 bases:

>100_bases
AGGCGCTCGGCGACGTTCGTTCCTGCCTCAAACGCCGGCGGTCGCCTCCGCGACCTTGGCTCTCGCTACGCTCGACGCCT
CGGCTCGGCCGAGGCCCGCT

Product: acyl-CoA dehydrogenase domain protein

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase Short-Chain Specific; Acyl-CoA Dehydrogenase Protein; Transmembrane Acyl-CoA Dehydrogenase; Short-Chain Acyl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase-Like Protein; Carnitine Operon Oxidoreductase; Acyl-CoA Dehydrogenase Type 2-Like; Acyl-Coa Dehydrogenase; Acyl-CoA Dehydrogenase C-Terminal Domain Protein

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTMQPTTRPDGRVGDAADLLTRAAAAAAIAATHADAVDRDGRFPEEAVAAFRSQRLLGAAVPIELGGEGASVRMLAEICY
VLGRACASSAMIFAMHQTKVACLIRHGRGEPWQDGLLRRIADEQLLMASSTTEGQGGGNVRSSSAAIEADGDAVTLERAA
TVISYGAQADGVVTVARRSAEAGPSDQVLCVFLREDYTLERLSGWETLGMRGTCSSGFRLVARGRPEQVLAARYSDIHNR
TMTPVSHILWSSAWTGIAASAVDCAQAFTRTAMRGAGGVAPPGALHYARAVSSLKQARALVTQALDTFEAAEGDPAALAG
LDVQTALTMLKVEVSELAVATVWSALRANGLAGYRQDGAFSIGRALRDILSAPIMIHNDRILANLATATLMSPVAASLSA

Sequences:

>Translated_400_residues
MTMQPTTRPDGRVGDAADLLTRAAAAAAIAATHADAVDRDGRFPEEAVAAFRSQRLLGAAVPIELGGEGASVRMLAEICY
VLGRACASSAMIFAMHQTKVACLIRHGRGEPWQDGLLRRIADEQLLMASSTTEGQGGGNVRSSSAAIEADGDAVTLERAA
TVISYGAQADGVVTVARRSAEAGPSDQVLCVFLREDYTLERLSGWETLGMRGTCSSGFRLVARGRPEQVLAARYSDIHNR
TMTPVSHILWSSAWTGIAASAVDCAQAFTRTAMRGAGGVAPPGALHYARAVSSLKQARALVTQALDTFEAAEGDPAALAG
LDVQTALTMLKVEVSELAVATVWSALRANGLAGYRQDGAFSIGRALRDILSAPIMIHNDRILANLATATLMSPVAASLSA
>Mature_399_residues
TMQPTTRPDGRVGDAADLLTRAAAAAAIAATHADAVDRDGRFPEEAVAAFRSQRLLGAAVPIELGGEGASVRMLAEICYV
LGRACASSAMIFAMHQTKVACLIRHGRGEPWQDGLLRRIADEQLLMASSTTEGQGGGNVRSSSAAIEADGDAVTLERAAT
VISYGAQADGVVTVARRSAEAGPSDQVLCVFLREDYTLERLSGWETLGMRGTCSSGFRLVARGRPEQVLAARYSDIHNRT
MTPVSHILWSSAWTGIAASAVDCAQAFTRTAMRGAGGVAPPGALHYARAVSSLKQARALVTQALDTFEAAEGDPAALAGL
DVQTALTMLKVEVSELAVATVWSALRANGLAGYRQDGAFSIGRALRDILSAPIMIHNDRILANLATATLMSPVAASLSA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.3

Molecular weight: Translated: 41819; Mature: 41688

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQPTTRPDGRVGDAADLLTRAAAAAAIAATHADAVDRDGRFPEEAVAAFRSQRLLGAA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE
VPIELGGEGASVRMLAEICYVLGRACASSAMIFAMHQTKVACLIRHGRGEPWQDGLLRRI
CCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHH
ADEQLLMASSTTEGQGGGNVRSSSAAIEADGDAVTLERAATVISYGAQADGVVTVARRSA
HHHHHEEECCCCCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHCCCCCCCEEEEEHHCC
EAGPSDQVLCVFLREDYTLERLSGWETLGMRGTCSSGFRLVARGRPEQVLAARYSDIHNR
CCCCCCCEEEEEECCCCCHHHHCCCHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC
TMTPVSHILWSSAWTGIAASAVDCAQAFTRTAMRGAGGVAPPGALHYARAVSSLKQARAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VTQALDTFEAAEGDPAALAGLDVQTALTMLKVEVSELAVATVWSALRANGLAGYRQDGAF
HHHHHHHHHCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SIGRALRDILSAPIMIHNDRILANLATATLMSPVAASLSA
HHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMQPTTRPDGRVGDAADLLTRAAAAAAIAATHADAVDRDGRFPEEAVAAFRSQRLLGAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE
VPIELGGEGASVRMLAEICYVLGRACASSAMIFAMHQTKVACLIRHGRGEPWQDGLLRRI
CCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHH
ADEQLLMASSTTEGQGGGNVRSSSAAIEADGDAVTLERAATVISYGAQADGVVTVARRSA
HHHHHEEECCCCCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHCCCCCCCEEEEEHHCC
EAGPSDQVLCVFLREDYTLERLSGWETLGMRGTCSSGFRLVARGRPEQVLAARYSDIHNR
CCCCCCCEEEEEECCCCCHHHHCCCHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC
TMTPVSHILWSSAWTGIAASAVDCAQAFTRTAMRGAGGVAPPGALHYARAVSSLKQARAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VTQALDTFEAAEGDPAALAGLDVQTALTMLKVEVSELAVATVWSALRANGLAGYRQDGAF
HHHHHHHHHCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SIGRALRDILSAPIMIHNDRILANLATATLMSPVAASLSA
HHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA