Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is purP [H]
Identifier: 218710384
GI number: 218710384
Start: 2588917
End: 2590206
Strand: Reverse
Name: purP [H]
Synonym: VS_2421
Alternate gene names: 218710384
Gene position: 2590206-2588917 (Counterclockwise)
Preceding gene: 218710386
Following gene: 218710383
Centisome position: 78.51
GC content: 45.43
Gene sequence:
>1290_bases ATGTTCGAAAAGCTATTCAAACTCAGTGAAAATGGCACCAATGTGCGCACTGAAATCATCGCAGGTCTAACAACCTTCCT AACAATGGCTTACATCATTTTTGTAAACCCAATGATTCTAGCTGATGCTGGTATGGACCATGGCGCTGTATTTGTAGCAA CCTGTTTAGCAGCTGCTATTGGCTGTTTCATCATGGGCTTTGTTGCTAACTACCCAATTGCTCAAGCTCCAGGCATGGGT TTGAATGCATTCTTTACCTACGCTGTTGTAATGGGGATGGGTTATACGTGGCAAGTTGCTCTGGCAGCGGTTTTCGTATC AGGCGTGATCTTCATATTCTTAAGCATCTTTAAGATCCGTGAATGGATTATCAACTCGATCCCTATGTCTCTGCGTGTTG GTATCTCTGCAGGTATCGGTCTTTTCCTAGCGTTTATTGCTCTTAGCAATGCAGGCATCGTTGTTTCTAACCCAGCAACT AAAGTTTCACTGGGCGACATTACCGCGATTGCTCCTATCCTAGGTGCACTTGGTTTCTTCCTTACGATTGCTCTTGTTCA CCGTGGTGTAAAAGGTGCAGTGATGATTGCTATTCTAGCTATCACAGCTGTTGGTATTGCTATTGGTGACGTTCAATACG GCGGCATCATGTCGACACCACCAAGCCTTGCACCAACATTCATGCAGCTTGATTTCTCTGCTGTATTTGAAATAGGTATG ATTTCAGTAGTATTCGCTTTCTTGTTCGTCGATTTATTCGATACAGCGGGCACTCTGGTTGGTGTTGCAACGAAAGCAAA CCTAATCAAAGAAGACGGTAAACTGCCTCGTCTGAACAAGGCACTGCTTGCTGACTCAACAGCAACATCAATTGGTGCAC TGCTAGGTACATCAAATACAACCTCTTACGTTGAGAGTGTTGCGGGTGTCGCTGAAGGCGGCCGTACCGGTCTAACAGCG GTTGTTGTTGGTATCTTGTTCCTACTGGCTCTTTTCTTCTCACCGCTTGCCGGTATGATTCCAGCCTACGCAACATCAGG TGCGTTGTTCTATGTAGCAATTTTGATGATGTCTGGCCTAGTTGGTATTGATTGGCGTGATCTTACGGAAGCAGCCCCAG TCGTGGTAACATGTCTGCTTATGCCGTTGACATACTCTATCGCTGAGGGTATCTCACTAGGCTTCATCGCTTACGCTGCA ATTAAGCTGCTAAGTGGTAAAGGTCGCGACGTTTCACCTGCTGTGTGGGTAATGTCGGCTATCTTTATTCTTAAATATAC TTTCGCTTAA
Upstream 100 bases:
>100_bases AGAGCCTTAATTCTATCTGGAATTTGTTATTTGATAACTTTATAATCCACAGCCAATCGATTACGCAACCGTTTACTTTT TACCCTTATAGGATTCGATA
Downstream 100 bases:
>100_bases TCGTCTAGATTTCTGCTTAATCGCTGAAGAGGCTATGTTTGAAATAGCCTCTAATAACATGACAAAATTATTAGGTTTTA TACTATGAGCAACAAATTCG
Product: permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MFEKLFKLSENGTNVRTEIIAGLTTFLTMAYIIFVNPMILADAGMDHGAVFVATCLAAAIGCFIMGFVANYPIAQAPGMG LNAFFTYAVVMGMGYTWQVALAAVFVSGVIFIFLSIFKIREWIINSIPMSLRVGISAGIGLFLAFIALSNAGIVVSNPAT KVSLGDITAIAPILGALGFFLTIALVHRGVKGAVMIAILAITAVGIAIGDVQYGGIMSTPPSLAPTFMQLDFSAVFEIGM ISVVFAFLFVDLFDTAGTLVGVATKANLIKEDGKLPRLNKALLADSTATSIGALLGTSNTTSYVESVAGVAEGGRTGLTA VVVGILFLLALFFSPLAGMIPAYATSGALFYVAILMMSGLVGIDWRDLTEAAPVVVTCLLMPLTYSIAEGISLGFIAYAA IKLLSGKGRDVSPAVWVMSAIFILKYTFA
Sequences:
>Translated_429_residues MFEKLFKLSENGTNVRTEIIAGLTTFLTMAYIIFVNPMILADAGMDHGAVFVATCLAAAIGCFIMGFVANYPIAQAPGMG LNAFFTYAVVMGMGYTWQVALAAVFVSGVIFIFLSIFKIREWIINSIPMSLRVGISAGIGLFLAFIALSNAGIVVSNPAT KVSLGDITAIAPILGALGFFLTIALVHRGVKGAVMIAILAITAVGIAIGDVQYGGIMSTPPSLAPTFMQLDFSAVFEIGM ISVVFAFLFVDLFDTAGTLVGVATKANLIKEDGKLPRLNKALLADSTATSIGALLGTSNTTSYVESVAGVAEGGRTGLTA VVVGILFLLALFFSPLAGMIPAYATSGALFYVAILMMSGLVGIDWRDLTEAAPVVVTCLLMPLTYSIAEGISLGFIAYAA IKLLSGKGRDVSPAVWVMSAIFILKYTFA >Mature_429_residues MFEKLFKLSENGTNVRTEIIAGLTTFLTMAYIIFVNPMILADAGMDHGAVFVATCLAAAIGCFIMGFVANYPIAQAPGMG LNAFFTYAVVMGMGYTWQVALAAVFVSGVIFIFLSIFKIREWIINSIPMSLRVGISAGIGLFLAFIALSNAGIVVSNPAT KVSLGDITAIAPILGALGFFLTIALVHRGVKGAVMIAILAITAVGIAIGDVQYGGIMSTPPSLAPTFMQLDFSAVFEIGM ISVVFAFLFVDLFDTAGTLVGVATKANLIKEDGKLPRLNKALLADSTATSIGALLGTSNTTSYVESVAGVAEGGRTGLTA VVVGILFLLALFFSPLAGMIPAYATSGALFYVAILMMSGLVGIDWRDLTEAAPVVVTCLLMPLTYSIAEGISLGFIAYAA IKLLSGKGRDVSPAVWVMSAIFILKYTFA
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=52.1028037383178, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI87082309, Length=423, Percent_Identity=48.936170212766, Blast_Score=431, Evalue=1e-122, Organism=Escherichia coli, GI1790499, Length=419, Percent_Identity=38.9021479713604, Blast_Score=266, Evalue=3e-72, Organism=Escherichia coli, GI48994909, Length=432, Percent_Identity=36.8055555555556, Blast_Score=246, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 44856; Mature: 44856
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKLFKLSENGTNVRTEIIAGLTTFLTMAYIIFVNPMILADAGMDHGAVFVATCLAAAI CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCHHHHHHHHHHHH GCFIMGFVANYPIAQAPGMGLNAFFTYAVVMGMGYTWQVALAAVFVSGVIFIFLSIFKIR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWIINSIPMSLRVGISAGIGLFLAFIALSNAGIVVSNPATKVSLGDITAIAPILGALGFF HHHHHCCCHHEEHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHH LTIALVHRGVKGAVMIAILAITAVGIAIGDVQYGGIMSTPPSLAPTFMQLDFSAVFEIGM HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ISVVFAFLFVDLFDTAGTLVGVATKANLIKEDGKLPRLNKALLADSTATSIGALLGTSNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH TSYVESVAGVAEGGRTGLTAVVVGILFLLALFFSPLAGMIPAYATSGALFYVAILMMSGL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC VGIDWRDLTEAAPVVVTCLLMPLTYSIAEGISLGFIAYAAIKLLSGKGRDVSPAVWVMSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IFILKYTFA HHHHHHHCC >Mature Secondary Structure MFEKLFKLSENGTNVRTEIIAGLTTFLTMAYIIFVNPMILADAGMDHGAVFVATCLAAAI CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCHHHHHHHHHHHH GCFIMGFVANYPIAQAPGMGLNAFFTYAVVMGMGYTWQVALAAVFVSGVIFIFLSIFKIR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWIINSIPMSLRVGISAGIGLFLAFIALSNAGIVVSNPATKVSLGDITAIAPILGALGFF HHHHHCCCHHEEHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHH LTIALVHRGVKGAVMIAILAITAVGIAIGDVQYGGIMSTPPSLAPTFMQLDFSAVFEIGM HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ISVVFAFLFVDLFDTAGTLVGVATKANLIKEDGKLPRLNKALLADSTATSIGALLGTSNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH TSYVESVAGVAEGGRTGLTAVVVGILFLLALFFSPLAGMIPAYATSGALFYVAILMMSGL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC VGIDWRDLTEAAPVVVTCLLMPLTYSIAEGISLGFIAYAAIKLLSGKGRDVSPAVWVMSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IFILKYTFA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]