Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is gpt [H]
Identifier: 218710383
GI number: 218710383
Start: 2588368
End: 2588832
Strand: Reverse
Name: gpt [H]
Synonym: VS_2420
Alternate gene names: 218710383
Gene position: 2588832-2588368 (Counterclockwise)
Preceding gene: 218710384
Following gene: 218710382
Centisome position: 78.47
GC content: 47.1
Gene sequence:
>465_bases ATGAGCAACAAATTCGTTATCACTTGGGACAACATGCAGACTTACTGCCGTCAACTTGCTGAAAAGCAAATGCCAGCAGA GCAGTGGAAAGGCATCTGGGCAGTGAGCCGTGGTGGTTTGGTTCCTGGTGCAATCTTGGCTCGTGAGCTAGGTATTCGTC ACGTAGATACGATTTGTATTTCTAGCTACGACCACGATCACCAACGTGATATGACAGTCGTTAAAGCACCTGAAGGTGAC GGCGAAGGCTTCCTAATCGTTGAAGATCTTGTTGATAGTGGTGACACTGCACGCAAGCTTCGTGAAATGTATCCGAAAGC GAAACTGATCGCTGTGTGTGCAAAGCCATCTGGTGCTGATTTGCTAGACGAGTACATCGTTGATATCGCTCAAGACACAT GGATTGAGCAACCTTGGGATACTAGCCTAAGCTACGTTGAGCCGGTAAATCGCAAGTCAAAATAA
Upstream 100 bases:
>100_bases ATATACTTTCGCTTAATCGTCTAGATTTCTGCTTAATCGCTGAAGAGGCTATGTTTGAAATAGCCTCTAATAACATGACA AAATTATTAGGTTTTATACT
Downstream 100 bases:
>100_bases GCGTAAACTTAGTTTTTTGAGAAATGACCCTTTATAGGGTCATTTTTTTTTATATGATTAGTAACAACCATTTCTTATTA AGTATCCCAATGTCTGAATC
Product: xanthine-guanine phosphoribosyltransferase
Products: NA
Alternate protein names: Xanthine-guanine phosphoribosyltransferase; XGPRT [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSNKFVITWDNMQTYCRQLAEKQMPAEQWKGIWAVSRGGLVPGAILARELGIRHVDTICISSYDHDHQRDMTVVKAPEGD GEGFLIVEDLVDSGDTARKLREMYPKAKLIAVCAKPSGADLLDEYIVDIAQDTWIEQPWDTSLSYVEPVNRKSK
Sequences:
>Translated_154_residues MSNKFVITWDNMQTYCRQLAEKQMPAEQWKGIWAVSRGGLVPGAILARELGIRHVDTICISSYDHDHQRDMTVVKAPEGD GEGFLIVEDLVDSGDTARKLREMYPKAKLIAVCAKPSGADLLDEYIVDIAQDTWIEQPWDTSLSYVEPVNRKSK >Mature_153_residues SNKFVITWDNMQTYCRQLAEKQMPAEQWKGIWAVSRGGLVPGAILARELGIRHVDTICISSYDHDHQRDMTVVKAPEGDG EGFLIVEDLVDSGDTARKLREMYPKAKLIAVCAKPSGADLLDEYIVDIAQDTWIEQPWDTSLSYVEPVNRKSK
Specific function: Acts on guanine, xanthine and to a lesser extent hypoxanthine [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786433, Length=152, Percent_Identity=63.1578947368421, Blast_Score=221, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 17383; Mature: 17252
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKFVITWDNMQTYCRQLAEKQMPAEQWKGIWAVSRGGLVPGAILARELGIRHVDTICI CCCCEEEEECCHHHHHHHHHHHCCCHHHCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHH SSYDHDHQRDMTVVKAPEGDGEGFLIVEDLVDSGDTARKLREMYPKAKLIAVCAKPSGAD CCCCCCCCCCEEEEECCCCCCCCEEEEHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHH LLDEYIVDIAQDTWIEQPWDTSLSYVEPVNRKSK HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure SNKFVITWDNMQTYCRQLAEKQMPAEQWKGIWAVSRGGLVPGAILARELGIRHVDTICI CCCEEEEECCHHHHHHHHHHHCCCHHHCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHH SSYDHDHQRDMTVVKAPEGDGEGFLIVEDLVDSGDTARKLREMYPKAKLIAVCAKPSGAD CCCCCCCCCCEEEEECCCCCCCCEEEEHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHH LLDEYIVDIAQDTWIEQPWDTSLSYVEPVNRKSK HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA