| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is lktA [H]
Identifier: 218709385
GI number: 218709385
Start: 1519948
End: 1525599
Strand: Direct
Name: lktA [H]
Synonym: VS_1394
Alternate gene names: 218709385
Gene position: 1519948-1525599 (Clockwise)
Preceding gene: 218709376
Following gene: 218709388
Centisome position: 46.07
GC content: 43.81
Gene sequence:
>5652_bases ATGAGTTTAGGGATTTATATGGACATGACAGTATTGAATGCGAGCGGTGCATTAGCATTAGGTCAACGCATTGTTATTTC GATAGATGGCACAATCAAGGTCCTAGAAGACGGCCAGCCATTACAAGCTGGGGATGTCGTTTTAGAATCCCAAAATGTAA ATTCTGAATCTCAGATTTCAGTTAAGCGCTTTACGCCACAAGGAAAAGATGGCGATGAAGTGGAACTTGACCAAGACATT GAAAATATTTTTGCCGCTTTAGAAGAAGGGCAAGACCCTACAGAGTTAGGCGAAGAGTTCGCAACTGCTGCTGGTGTAAG TGGATCGAGCTTAGTAAGCAGTGGAACCATCGAGCGTGATGGTGACGAAACCATCCCAGTTACCGAATTTGTAACAACTG GTTTCGAAGGCTTGGGTTTGTCTCGTACTCAAAGTTTAAGTTTGCTTGATTTGTTCCGTGCAGTTGAAGTTGAACCAACA GTAAGTATTGAAGACAGCCAAATTATTAATGAAGGCTCAACAGCAATTTTCGAAGTAAGTCTAAGTAAAGTTGCGTCAGG TGATGTGAGCGTTACGCTAGAGACCCTTTACGGTACAGCAACTGCGGACGACATCACAAGTATCGTTGTGAAAGATGCCG CAGGTAACGTAGTGACTCCAAACGCTGACGGCTCTTACACCGTGCCAGCGGGTGAAACTAAGCTGGTTGTTGAAGTCGCA ACCAAAGACGACGGCACGTTCGAAGGCGATGAGAAACTGAGCCTAAAAGTGACGGGCGCAACCGGCGTGACAGGCACTGG TACGGGTGAGCTGACCATTAAAGATGATGGCACAGGTCCTGTAGACCCAACCGATCCTACTCTGCCAGTGAATCCTGATG ACCGCCCAACGGTGAGCATCGAAGACAGTAAAGTTATTAACGAAGGCTCGACAGCGAGCTTTGATGTGAGCTTAAGCAAA GCAGCATCAGTCGACGTGAGCGTAACGCTAGAAACCCTTTACGGCACAGCAACAGCGGACGACATCAACAGCGTTGTTGT GAAAGATGCCGCGGGTAACGTAGTGACACCGAACGCTGACGGCTCTTACACCGTCAAAGCGGGTGAAACGAAGTTAGTTG TTGAAGTCGCAACCAAAGACGACGGCACGTATGAAGGCGATGAGAAACTGAGCCTTAAAGTGACGGGCGCAGCCGGCGTC ATTGGCACGGGAACCGGTGAGCTGACCATCAAAGATGATGGTAAAGGTCCTGTTGATCCAACCAATCCAAATCCAGATGA CCGCCCATCGGTGAGTATCGAAGACAGCAAAGTTATTAACGAAGGCTCGACCGCGAGCTTCGATGTGAGCTTAAGCAAAG CTGCATCCGTCGACGTGAGCGTTACGCTAGAAACCCTTTACGGCACAGCAACAGCGGACGATATCTCTAGCATTGTTGTG AAAGATGCCCAAGGTAACGTAGTAACACCAAACGCTGACGGCTCTTACACCGTCAAAGCAGGTGAAACTAAGCTGGTTGT TGAAGTGGCGACTAAAGACGACGGTACGTACGAAGGCGACGAGAAACTGAGCCTGAAAGTGACGGGCGTGACGGGCGTTA ACGGCACGGACACCAGTGACTTAACCATCACCGATGACGGCACCGGCCCGGTCGACCCTGGCACTCCAAACCCAGACGAT CGCCCATCGGTGAGCATCGAAGACAGCAAGAGCATCAACGAAGGCTCAACGGCGAGCTTTGACGTGACGTTGACCAAAGC GGCAGCGGTGGATGTGACGGTTGATATTGACACGCTTTACGGCACAGCGACGGCAGAGGACATCACGAGCATCGTGGTGA AAGACTCGGCAGGTCAGGTTGTGACGGCGAACGCAGATGGCTCTTACACGGTGAAAGCGGGTGAAACCCAACTGACTGTC GAAGTGGCGACCAAAGACGACGCGACGTACGAAGGCGACGAGAAACTGAGCCTGAAAGTGACGGGCGTGACGGGCGTTAA CGGCACGGACACCAGTGACTTAACCATCACCGATGAGGACGTAACTATCAAAGTCCATGATGCTGCGCCTGTCGATGAAG GAGATAAAGCATCCTTTAAAGTGACATTAAATGAAGCCTCTTCTGAAAAACAGTATGTTAAATTTGAAGCGACAACGAAT GGTTACGATACCGAATTTGATGATATTGATACCAATAGCCTAACTTACGAATATAAAGATACTAATGGTGTATTCCAGGT TGCTAATGTCGTTAACGGTTATGTAGAAATTCCAGCAGGAAGAACTGAGCTTCGTGTAACGGTTCAAACCGTGCAAGACG ATAAATTTGAATGGACTGAACGTTTTGGACTACACATTGTAGATACAAAATCTCAGGTCGGCGGAACGTCAAGTATTGAT GAAGCTAATTCTGATCTGAAAGGTCAGGGTACAATCAAGTTAGATCATACAGATAACCCTACGCTTACATTGACGAATGC TAATGCTGTTGATGAAGGAAGCACGGCCGTATTTGATGGGCAACTATCGAAGGTGTCTGAAGCGTCGATTGAGATGAAAG TCGAGTTTGAATTTTCTAATGGCGTTGGCAAAGCAAACCTTGAGGATTTAGCCGCGGACATTAGTAAACCGTTTGCTGGG GTTACAGTCACTTATGTTTCTGGCGGAGTGATTAAGACTATTTCGGTAAATGAAGTGGATGGCACATTCACGCTTCCTGC GAGAGTTACGGATTTCAAAGTTAATGTAGATACAGTAAATGATAACCGTTTCGAAACATCAGAAGACTTTGGGATTAAGT TGAGTGAGATACCTTTCCAATCTTCAACTGATGCTAGTAAAGATGTAATCATTAATCACGGTCAGCATGGTGTATCAGCT ACGGGCTCTATAAATGAAGATGCTTCTGATAAACCCGCAATAAGTGTGTCCGATGCTCTTGCTGTTAAAGAAGGTGGTGT GTTGGAGTACAGCGTTGCACTTACAGGTTCTTCTGATATAGAAGTTAAATATTCATTTAACTTCCCAAATAGTAGTGATG TTAAAAAAGCAGACATTTCGTTTACGGATGGCGTTAAACTGAGTGCTGATAAACAATTTATTATAGTGCCTAAACATGTA TCTAACTTTAAGGTCATTGTTCCTACATTAGATGATGTTCTTGTAGAAAATACCGAAAACTACACGATCAGTATTGGCGG TGATACAGGTACTGGCTCAATACTAGATAATGAAGTTGCTCCTATTGTTACGAATCAGTCGGTAAGCCTGTCTGAAGAAG GTTTAATGAATGGTATCTCTGATAATAACGGTTTACCTACAGATTCAACGGATGCTTATTCGATTCAGGGTGACCTAGTT ATTACCGACGCTAATAATAACTTGCATGACACAGTATTTAGTGAAACAAGCACAATTAACATTACAACATCTACAGGTCA GCCTCTTACATCAAGTGGTAGCCTTGTTACTTGGAATGTATCGAACGGTGGTCACACGCTGGTTGGTTCGGCTAATGGAC AGAATGTGATTGAAGCGACGTTGACTAGTGACGGACATTACGAGATTCATTTAAAAGGGCCAGTTGATCATACGAACGTT AACGGTGAAGATAGTCTAGTTCTTCAGATTCCTGTAATAGCTAAAGACACGTCGGGTCTGACAAGCACTGGTGGGCAGAT ATCGGTCTCGATAGAAGATGATCAACCTGTTGCGAAAAATATAGACATCTCTGTTTCGCCTGAAACTAAGTCAAATACTA ACGTTCAGCTGATTCTTGATACATCGGGTTCTATGAGTAATAGTTCTAACGGTAAACTTGCTATTATGAAGGCTGCTGTA TCTAAGATGCTCGATCAGTATCATGATATGGGTGATGTAAGAGTCCAGTTAATAGATTTCAATAGTAGATCGACTCGTTT AGAGTTTAATGGTCGCGCTTGGATGACAGTATCTGAGGCTAAATATTTAGTTAATAGACTGACTGCAGGTGGTGGTACCG ATTATGATGATGCGGTTAAAAAAGCTCGTCAATCTTGGGACCATGATGAACACTTGCAACTAGACAATGCAAATAATGTC AGCTATTTCATCTCAGATGGTAAGCCTCAAGATGGGCACGACGATGCAACAATTAGTGATAATGAAGAAACAAAATGGGC TAATCACCTTATATCTAACGGTATTACATCCCAATCTATAGGTATCAATAGTAGTGGTAGCCTAAACGACTCCGGACAAA TTGATAGAGTGTCTTATGATGGCACGAAAGGAAGTTCGTCAGGAGCAGATACTGATGCAATTATTATTAAAGATGCAAAT GGATTATCTGATGTGCTTACTCAATCTATCATTAAAACAGTGTCCGGCCATTTAACTCAAGATGGTGGCTTTGGCGCTGA TGGTGGTTATGTTAGTCAGTTAGTTATTGATGGCGTAACTTTTAATTTTGATGGTTCAACTATCAGTTCTACAGGACAGA ACTCTAAGATCAGCTTTACCAAAAATGAATCAACAAACGAGTTAAAAGTTACGGTCGATGGCAAGTACACTTTGAGTATC GATATGGATACGGGTTCGTACAAATTTGGTGGCAAACCACAAGCTAGACCTGAAACCGTAGACTTCGATTACACATTAAA AGATGGTGATGGTGATACAAGTAGCAGTCATATTTCATTTGATGTAATGGGTTCAAAAGGCAGCGTAGATGTGTCGTCTA CAGGCAAGATGATCGATTCTGTTAAAGTTCTTCATGATAATTTGAGTTGGATAGGATCACCTGCAGTAACCAATGGACAA GCGGGTTACAACAAGATTGTAGACAATGTTGATATCAACAAAGGTGTTTCAATCAATGTTGGTGATGCTGGCGATGCTGT TTGGACTGGCCAGGGTGACGATGTCATTTATCTTGGTGATAGTCATGCTGTCTTGGACCAAAATACTGGGCAAGCGTCTA ACCAAGATGCGATCAACACTTATATTAAAGATGTTTTCACTCAAGGTCGCGATTCGAACGTAATACTTAACCCTAACCAA GGTGAAGATAGTGAGATAGCTGCTACTAATAACAGTACAGCAAACTTGGATGTTGCTCATGGTGGCGGCGGTAGTGACTA TATCTACGGAGAAGGTGGCTCAGACGTTATATTCGGTGGGTCAGGCGATGACGTCATTGATGGCGGTGAAGGTAACGATG GTCTTCGAGGCGGTACGGGTCACGATACACTTAAAGGCGGATCTGGCGATGATATTCTTATCGGTGGTATTGGTAACGAT ATTTTAACCGGCGGTAGTGATGATGATATCTTCAAGTTTGTCGACCAAGGTTCTGGTGTTCGTCATGGTGAGAAAGACAC AATTACAGACTTTACTAAGGGTGATGATAAAATAGATATTTCCGATCTACTTCATACAGATTCTTCTGACAGTATTAATA GCCTACTTCAAAGCAGTAAGATTGGTATTTCTCTTGAAGGTGCAGATAATATGTCAACGGCAGATCTTAAGTTGACTGTG ACAGATGGTGGAAAAACTCAGGAGATCATATTGCAAGATAGCGCTGAACAATTTGATAGTTATATCACTAACGGTTCAAT TTCAGATGTGAGTGGACTATTAAACGATATATTGAAAATTTACGATAACTAA
Upstream 100 bases:
>100_bases TTAAACATGCAATTCATAGCTAGGAATTATATGACATTAGATGTTATATTGTCACTAGATTATAAAATTGATGTCACTAT TTTGACGTCACAAACAGAAA
Downstream 100 bases:
>100_bases ACAAAAAGGGCCGAAAGGCCCTTTTTTTATATCTTAATTTAGTAAAGTAACCGCGCTGAAGAAGACCTTACATTGAAGTT ATAACACGCTTCGGTTACAA
Product: putative hemolysin-type calcium-binding region
Products: NA
Alternate protein names: Lkt [H]
Number of amino acids: Translated: 1883; Mature: 1882
Protein sequence:
>1883_residues MSLGIYMDMTVLNASGALALGQRIVISIDGTIKVLEDGQPLQAGDVVLESQNVNSESQISVKRFTPQGKDGDEVELDQDI ENIFAALEEGQDPTELGEEFATAAGVSGSSLVSSGTIERDGDETIPVTEFVTTGFEGLGLSRTQSLSLLDLFRAVEVEPT VSIEDSQIINEGSTAIFEVSLSKVASGDVSVTLETLYGTATADDITSIVVKDAAGNVVTPNADGSYTVPAGETKLVVEVA TKDDGTFEGDEKLSLKVTGATGVTGTGTGELTIKDDGTGPVDPTDPTLPVNPDDRPTVSIEDSKVINEGSTASFDVSLSK AASVDVSVTLETLYGTATADDINSVVVKDAAGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGAAGV IGTGTGELTIKDDGKGPVDPTNPNPDDRPSVSIEDSKVINEGSTASFDVSLSKAASVDVSVTLETLYGTATADDISSIVV KDAQGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGVTGVNGTDTSDLTITDDGTGPVDPGTPNPDD RPSVSIEDSKSINEGSTASFDVTLTKAAAVDVTVDIDTLYGTATAEDITSIVVKDSAGQVVTANADGSYTVKAGETQLTV EVATKDDATYEGDEKLSLKVTGVTGVNGTDTSDLTITDEDVTIKVHDAAPVDEGDKASFKVTLNEASSEKQYVKFEATTN GYDTEFDDIDTNSLTYEYKDTNGVFQVANVVNGYVEIPAGRTELRVTVQTVQDDKFEWTERFGLHIVDTKSQVGGTSSID EANSDLKGQGTIKLDHTDNPTLTLTNANAVDEGSTAVFDGQLSKVSEASIEMKVEFEFSNGVGKANLEDLAADISKPFAG VTVTYVSGGVIKTISVNEVDGTFTLPARVTDFKVNVDTVNDNRFETSEDFGIKLSEIPFQSSTDASKDVIINHGQHGVSA TGSINEDASDKPAISVSDALAVKEGGVLEYSVALTGSSDIEVKYSFNFPNSSDVKKADISFTDGVKLSADKQFIIVPKHV SNFKVIVPTLDDVLVENTENYTISIGGDTGTGSILDNEVAPIVTNQSVSLSEEGLMNGISDNNGLPTDSTDAYSIQGDLV ITDANNNLHDTVFSETSTINITTSTGQPLTSSGSLVTWNVSNGGHTLVGSANGQNVIEATLTSDGHYEIHLKGPVDHTNV NGEDSLVLQIPVIAKDTSGLTSTGGQISVSIEDDQPVAKNIDISVSPETKSNTNVQLILDTSGSMSNSSNGKLAIMKAAV SKMLDQYHDMGDVRVQLIDFNSRSTRLEFNGRAWMTVSEAKYLVNRLTAGGGTDYDDAVKKARQSWDHDEHLQLDNANNV SYFISDGKPQDGHDDATISDNEETKWANHLISNGITSQSIGINSSGSLNDSGQIDRVSYDGTKGSSSGADTDAIIIKDAN GLSDVLTQSIIKTVSGHLTQDGGFGADGGYVSQLVIDGVTFNFDGSTISSTGQNSKISFTKNESTNELKVTVDGKYTLSI DMDTGSYKFGGKPQARPETVDFDYTLKDGDGDTSSSHISFDVMGSKGSVDVSSTGKMIDSVKVLHDNLSWIGSPAVTNGQ AGYNKIVDNVDINKGVSINVGDAGDAVWTGQGDDVIYLGDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQ GEDSEIAATNNSTANLDVAHGGGGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIGND ILTGGSDDDIFKFVDQGSGVRHGEKDTITDFTKGDDKIDISDLLHTDSSDSINSLLQSSKIGISLEGADNMSTADLKLTV TDGGKTQEIILQDSAEQFDSYITNGSISDVSGLLNDILKIYDN
Sequences:
>Translated_1883_residues MSLGIYMDMTVLNASGALALGQRIVISIDGTIKVLEDGQPLQAGDVVLESQNVNSESQISVKRFTPQGKDGDEVELDQDI ENIFAALEEGQDPTELGEEFATAAGVSGSSLVSSGTIERDGDETIPVTEFVTTGFEGLGLSRTQSLSLLDLFRAVEVEPT VSIEDSQIINEGSTAIFEVSLSKVASGDVSVTLETLYGTATADDITSIVVKDAAGNVVTPNADGSYTVPAGETKLVVEVA TKDDGTFEGDEKLSLKVTGATGVTGTGTGELTIKDDGTGPVDPTDPTLPVNPDDRPTVSIEDSKVINEGSTASFDVSLSK AASVDVSVTLETLYGTATADDINSVVVKDAAGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGAAGV IGTGTGELTIKDDGKGPVDPTNPNPDDRPSVSIEDSKVINEGSTASFDVSLSKAASVDVSVTLETLYGTATADDISSIVV KDAQGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGVTGVNGTDTSDLTITDDGTGPVDPGTPNPDD RPSVSIEDSKSINEGSTASFDVTLTKAAAVDVTVDIDTLYGTATAEDITSIVVKDSAGQVVTANADGSYTVKAGETQLTV EVATKDDATYEGDEKLSLKVTGVTGVNGTDTSDLTITDEDVTIKVHDAAPVDEGDKASFKVTLNEASSEKQYVKFEATTN GYDTEFDDIDTNSLTYEYKDTNGVFQVANVVNGYVEIPAGRTELRVTVQTVQDDKFEWTERFGLHIVDTKSQVGGTSSID EANSDLKGQGTIKLDHTDNPTLTLTNANAVDEGSTAVFDGQLSKVSEASIEMKVEFEFSNGVGKANLEDLAADISKPFAG VTVTYVSGGVIKTISVNEVDGTFTLPARVTDFKVNVDTVNDNRFETSEDFGIKLSEIPFQSSTDASKDVIINHGQHGVSA TGSINEDASDKPAISVSDALAVKEGGVLEYSVALTGSSDIEVKYSFNFPNSSDVKKADISFTDGVKLSADKQFIIVPKHV SNFKVIVPTLDDVLVENTENYTISIGGDTGTGSILDNEVAPIVTNQSVSLSEEGLMNGISDNNGLPTDSTDAYSIQGDLV ITDANNNLHDTVFSETSTINITTSTGQPLTSSGSLVTWNVSNGGHTLVGSANGQNVIEATLTSDGHYEIHLKGPVDHTNV NGEDSLVLQIPVIAKDTSGLTSTGGQISVSIEDDQPVAKNIDISVSPETKSNTNVQLILDTSGSMSNSSNGKLAIMKAAV SKMLDQYHDMGDVRVQLIDFNSRSTRLEFNGRAWMTVSEAKYLVNRLTAGGGTDYDDAVKKARQSWDHDEHLQLDNANNV SYFISDGKPQDGHDDATISDNEETKWANHLISNGITSQSIGINSSGSLNDSGQIDRVSYDGTKGSSSGADTDAIIIKDAN GLSDVLTQSIIKTVSGHLTQDGGFGADGGYVSQLVIDGVTFNFDGSTISSTGQNSKISFTKNESTNELKVTVDGKYTLSI DMDTGSYKFGGKPQARPETVDFDYTLKDGDGDTSSSHISFDVMGSKGSVDVSSTGKMIDSVKVLHDNLSWIGSPAVTNGQ AGYNKIVDNVDINKGVSINVGDAGDAVWTGQGDDVIYLGDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQ GEDSEIAATNNSTANLDVAHGGGGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIGND ILTGGSDDDIFKFVDQGSGVRHGEKDTITDFTKGDDKIDISDLLHTDSSDSINSLLQSSKIGISLEGADNMSTADLKLTV TDGGKTQEIILQDSAEQFDSYITNGSISDVSGLLNDILKIYDN >Mature_1882_residues SLGIYMDMTVLNASGALALGQRIVISIDGTIKVLEDGQPLQAGDVVLESQNVNSESQISVKRFTPQGKDGDEVELDQDIE NIFAALEEGQDPTELGEEFATAAGVSGSSLVSSGTIERDGDETIPVTEFVTTGFEGLGLSRTQSLSLLDLFRAVEVEPTV SIEDSQIINEGSTAIFEVSLSKVASGDVSVTLETLYGTATADDITSIVVKDAAGNVVTPNADGSYTVPAGETKLVVEVAT KDDGTFEGDEKLSLKVTGATGVTGTGTGELTIKDDGTGPVDPTDPTLPVNPDDRPTVSIEDSKVINEGSTASFDVSLSKA ASVDVSVTLETLYGTATADDINSVVVKDAAGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGAAGVI GTGTGELTIKDDGKGPVDPTNPNPDDRPSVSIEDSKVINEGSTASFDVSLSKAASVDVSVTLETLYGTATADDISSIVVK DAQGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGVTGVNGTDTSDLTITDDGTGPVDPGTPNPDDR PSVSIEDSKSINEGSTASFDVTLTKAAAVDVTVDIDTLYGTATAEDITSIVVKDSAGQVVTANADGSYTVKAGETQLTVE VATKDDATYEGDEKLSLKVTGVTGVNGTDTSDLTITDEDVTIKVHDAAPVDEGDKASFKVTLNEASSEKQYVKFEATTNG YDTEFDDIDTNSLTYEYKDTNGVFQVANVVNGYVEIPAGRTELRVTVQTVQDDKFEWTERFGLHIVDTKSQVGGTSSIDE ANSDLKGQGTIKLDHTDNPTLTLTNANAVDEGSTAVFDGQLSKVSEASIEMKVEFEFSNGVGKANLEDLAADISKPFAGV TVTYVSGGVIKTISVNEVDGTFTLPARVTDFKVNVDTVNDNRFETSEDFGIKLSEIPFQSSTDASKDVIINHGQHGVSAT GSINEDASDKPAISVSDALAVKEGGVLEYSVALTGSSDIEVKYSFNFPNSSDVKKADISFTDGVKLSADKQFIIVPKHVS NFKVIVPTLDDVLVENTENYTISIGGDTGTGSILDNEVAPIVTNQSVSLSEEGLMNGISDNNGLPTDSTDAYSIQGDLVI TDANNNLHDTVFSETSTINITTSTGQPLTSSGSLVTWNVSNGGHTLVGSANGQNVIEATLTSDGHYEIHLKGPVDHTNVN GEDSLVLQIPVIAKDTSGLTSTGGQISVSIEDDQPVAKNIDISVSPETKSNTNVQLILDTSGSMSNSSNGKLAIMKAAVS KMLDQYHDMGDVRVQLIDFNSRSTRLEFNGRAWMTVSEAKYLVNRLTAGGGTDYDDAVKKARQSWDHDEHLQLDNANNVS YFISDGKPQDGHDDATISDNEETKWANHLISNGITSQSIGINSSGSLNDSGQIDRVSYDGTKGSSSGADTDAIIIKDANG LSDVLTQSIIKTVSGHLTQDGGFGADGGYVSQLVIDGVTFNFDGSTISSTGQNSKISFTKNESTNELKVTVDGKYTLSID MDTGSYKFGGKPQARPETVDFDYTLKDGDGDTSSSHISFDVMGSKGSVDVSSTGKMIDSVKVLHDNLSWIGSPAVTNGQA GYNKIVDNVDINKGVSINVGDAGDAVWTGQGDDVIYLGDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQG EDSEIAATNNSTANLDVAHGGGGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTGHDTLKGGSGDDILIGGIGNDI LTGGSDDDIFKFVDQGSGVRHGEKDTITDFTKGDDKIDISDLLHTDSSDSINSLLQSSKIGISLEGADNMSTADLKLTVT DGGKTQEIILQDSAEQFDSYITNGSISDVSGLLNDILKIYDN
Specific function: One of the virulence factors of A.actinomycetemcomitans might be a cytotoxin, possibly the membrane-bound hemolysin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein. Secreted (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR018504 - InterPro: IPR003995 - InterPro: IPR011049 [H]
Pfam domain/function: PF00353 HemolysinCabind; PF02382 RTX [H]
EC number: NA
Molecular weight: Translated: 196961; Mature: 196829
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: PS50234 VWFA ; PS00330 HEMOLYSIN_CALCIUM ; PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGIYMDMTVLNASGALALGQRIVISIDGTIKVLEDGQPLQAGDVVLESQNVNSESQIS CCEEEEEEEEEECCCCCEEECCEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCCCEEE VKRFTPQGKDGDEVELDQDIENIFAALEEGQDPTELGEEFATAAGVSGSSLVSSGTIERD EEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCEECC GDETIPVTEFVTTGFEGLGLSRTQSLSLLDLFRAVEVEPTVSIEDSQIINEGSTAIFEVS CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCEEECCCCEECCCCEEEEEEE LSKVASGDVSVTLETLYGTATADDITSIVVKDAAGNVVTPNADGSYTVPAGETKLVVEVA EHHHCCCCEEEEEEEEECCCCHHHHEEEEEECCCCCEECCCCCCCEEECCCCEEEEEEEE TKDDGTFEGDEKLSLKVTGATGVTGTGTGELTIKDDGTGPVDPTDPTLPVNPDDRPTVSI ECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE EDSKVINEGSTASFDVSLSKAASVDVSVTLETLYGTATADDINSVVVKDAAGNVVTPNAD CCCEEECCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCEECCCCC GSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGAAGVIGTGTGELTIKDDGKGPVDP CCEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEECCCCCCCC TNPNPDDRPSVSIEDSKVINEGSTASFDVSLSKAASVDVSVTLETLYGTATADDISSIVV CCCCCCCCCCEEECCCEEECCCCCEEEEEEECCCCEEEEEEEEEEEECCCCHHCCEEEEE KDAQGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGVTGVNGTDTSD ECCCCCEECCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCC LTITDDGTGPVDPGTPNPDDRPSVSIEDSKSINEGSTASFDVTLTKAAAVDVTVDIDTLY EEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEE GTATAEDITSIVVKDSAGQVVTANADGSYTVKAGETQLTVEVATKDDATYEGDEKLSLKV CCCCHHCEEEEEEECCCCCEEEECCCCCEEEEECCEEEEEEEEECCCCCCCCCCEEEEEE TGVTGVNGTDTSDLTITDEDVTIKVHDAAPVDEGDKASFKVTLNEASSEKQYVKFEATTN EEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCC GYDTEFDDIDTNSLTYEYKDTNGVFQVANVVNGYVEIPAGRTELRVTVQTVQDDKFEWTE CCCCCCCCCCCCCEEEEEECCCCEEEEEHHHCCEEECCCCCEEEEEEEEEECCCCEEHHH RFGLHIVDTKSQVGGTSSIDEANSDLKGQGTIKLDHTDNPTLTLTNANAVDEGSTAVFDG HCCEEEEECCHHCCCCCCCHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECC QLSKVSEASIEMKVEFEFSNGVGKANLEDLAADISKPFAGVTVTYVSGGVIKTISVNEVD CHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCC GTFTLPARVTDFKVNVDTVNDNRFETSEDFGIKLSEIPFQSSTDASKDVIINHGQHGVSA CEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCEE TGSINEDASDKPAISVSDALAVKEGGVLEYSVALTGSSDIEVKYSFNFPNSSDVKKADIS CCCCCCCCCCCCCEEECCEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEEECE FTDGVKLSADKQFIIVPKHVSNFKVIVPTLDDVLVENTENYTISIGGDTGTGSILDNEVA ECCCEEEECCCEEEEECCCCCCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCEECCCCC PIVTNQSVSLSEEGLMNGISDNNGLPTDSTDAYSIQGDLVITDANNNLHDTVFSETSTIN EEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCHHEECCCEEEE ITTSTGQPLTSSGSLVTWNVSNGGHTLVGSANGQNVIEATLTSDGHYEIHLKGPVDHTNV EEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCEEEEEEECCCCCCCC NGEDSLVLQIPVIAKDTSGLTSTGGQISVSIEDDQPVAKNIDISVSPETKSNTNVQLILD CCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCHHCEEEEECCCCCCCCEEEEEEE TSGSMSNSSNGKLAIMKAAVSKMLDQYHDMGDVRVQLIDFNSRSTRLEFNGRAWMTVSEA CCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCEEEEEEHHH KYLVNRLTAGGGTDYDDAVKKARQSWDHDEHLQLDNANNVSYFISDGKPQDGHDDATISD HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEECC NEETKWANHLISNGITSQSIGINSSGSLNDSGQIDRVSYDGTKGSSSGADTDAIIIKDAN CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC GLSDVLTQSIIKTVSGHLTQDGGFGADGGYVSQLVIDGVTFNFDGSTISSTGQNSKISFT CHHHHHHHHHHHHHHCCEECCCCCCCCCCEEEEEEEECEEEEECCCEECCCCCCCEEEEE KNESTNELKVTVDGKYTLSIDMDTGSYKFGGKPQARPETVDFDYTLKDGDGDTSSSHISF CCCCCCEEEEEECCEEEEEEEECCCCEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEE DVMGSKGSVDVSSTGKMIDSVKVLHDNLSWIGSPAVTNGQAGYNKIVDNVDINKGVSINV EEECCCCCEEECCCCCHHHHHHEECCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEE GDAGDAVWTGQGDDVIYLGDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQ CCCCCEEEECCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCC GEDSEIAATNNSTANLDVAHGGGGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTG CCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCC HDTLKGGSGDDILIGGIGNDILTGGSDDDIFKFVDQGSGVRHGEKDTITDFTKGDDKIDI CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEH SDLLHTDSSDSINSLLQSSKIGISLEGADNMSTADLKLTVTDGGKTQEIILQDSAEQFDS HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEECCHHHHHH YITNGSISDVSGLLNDILKIYDN HHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLGIYMDMTVLNASGALALGQRIVISIDGTIKVLEDGQPLQAGDVVLESQNVNSESQIS CEEEEEEEEEECCCCCEEECCEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCCCEEE VKRFTPQGKDGDEVELDQDIENIFAALEEGQDPTELGEEFATAAGVSGSSLVSSGTIERD EEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCEECC GDETIPVTEFVTTGFEGLGLSRTQSLSLLDLFRAVEVEPTVSIEDSQIINEGSTAIFEVS CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCEEECCCCEECCCCEEEEEEE LSKVASGDVSVTLETLYGTATADDITSIVVKDAAGNVVTPNADGSYTVPAGETKLVVEVA EHHHCCCCEEEEEEEEECCCCHHHHEEEEEECCCCCEECCCCCCCEEECCCCEEEEEEEE TKDDGTFEGDEKLSLKVTGATGVTGTGTGELTIKDDGTGPVDPTDPTLPVNPDDRPTVSI ECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE EDSKVINEGSTASFDVSLSKAASVDVSVTLETLYGTATADDINSVVVKDAAGNVVTPNAD CCCEEECCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCEECCCCC GSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGAAGVIGTGTGELTIKDDGKGPVDP CCEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEECCCCCCCC TNPNPDDRPSVSIEDSKVINEGSTASFDVSLSKAASVDVSVTLETLYGTATADDISSIVV CCCCCCCCCCEEECCCEEECCCCCEEEEEEECCCCEEEEEEEEEEEECCCCHHCCEEEEE KDAQGNVVTPNADGSYTVKAGETKLVVEVATKDDGTYEGDEKLSLKVTGVTGVNGTDTSD ECCCCCEECCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCC LTITDDGTGPVDPGTPNPDDRPSVSIEDSKSINEGSTASFDVTLTKAAAVDVTVDIDTLY EEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEE GTATAEDITSIVVKDSAGQVVTANADGSYTVKAGETQLTVEVATKDDATYEGDEKLSLKV CCCCHHCEEEEEEECCCCCEEEECCCCCEEEEECCEEEEEEEEECCCCCCCCCCEEEEEE TGVTGVNGTDTSDLTITDEDVTIKVHDAAPVDEGDKASFKVTLNEASSEKQYVKFEATTN EEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCC GYDTEFDDIDTNSLTYEYKDTNGVFQVANVVNGYVEIPAGRTELRVTVQTVQDDKFEWTE CCCCCCCCCCCCCEEEEEECCCCEEEEEHHHCCEEECCCCCEEEEEEEEEECCCCEEHHH RFGLHIVDTKSQVGGTSSIDEANSDLKGQGTIKLDHTDNPTLTLTNANAVDEGSTAVFDG HCCEEEEECCHHCCCCCCCHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECC QLSKVSEASIEMKVEFEFSNGVGKANLEDLAADISKPFAGVTVTYVSGGVIKTISVNEVD CHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCC GTFTLPARVTDFKVNVDTVNDNRFETSEDFGIKLSEIPFQSSTDASKDVIINHGQHGVSA CEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCEE TGSINEDASDKPAISVSDALAVKEGGVLEYSVALTGSSDIEVKYSFNFPNSSDVKKADIS CCCCCCCCCCCCCEEECCEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEEECE FTDGVKLSADKQFIIVPKHVSNFKVIVPTLDDVLVENTENYTISIGGDTGTGSILDNEVA ECCCEEEECCCEEEEECCCCCCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCEECCCCC PIVTNQSVSLSEEGLMNGISDNNGLPTDSTDAYSIQGDLVITDANNNLHDTVFSETSTIN EEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCHHEECCCEEEE ITTSTGQPLTSSGSLVTWNVSNGGHTLVGSANGQNVIEATLTSDGHYEIHLKGPVDHTNV EEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCEEEEEEECCCCCCCC NGEDSLVLQIPVIAKDTSGLTSTGGQISVSIEDDQPVAKNIDISVSPETKSNTNVQLILD CCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCHHCEEEEECCCCCCCCEEEEEEE TSGSMSNSSNGKLAIMKAAVSKMLDQYHDMGDVRVQLIDFNSRSTRLEFNGRAWMTVSEA CCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCEEEEEEHHH KYLVNRLTAGGGTDYDDAVKKARQSWDHDEHLQLDNANNVSYFISDGKPQDGHDDATISD HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEECC NEETKWANHLISNGITSQSIGINSSGSLNDSGQIDRVSYDGTKGSSSGADTDAIIIKDAN CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC GLSDVLTQSIIKTVSGHLTQDGGFGADGGYVSQLVIDGVTFNFDGSTISSTGQNSKISFT CHHHHHHHHHHHHHHCCEECCCCCCCCCCEEEEEEEECEEEEECCCEECCCCCCCEEEEE KNESTNELKVTVDGKYTLSIDMDTGSYKFGGKPQARPETVDFDYTLKDGDGDTSSSHISF CCCCCCEEEEEECCEEEEEEEECCCCEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEEE DVMGSKGSVDVSSTGKMIDSVKVLHDNLSWIGSPAVTNGQAGYNKIVDNVDINKGVSINV EEECCCCCEEECCCCCHHHHHHEECCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEE GDAGDAVWTGQGDDVIYLGDSHAVLDQNTGQASNQDAINTYIKDVFTQGRDSNVILNPNQ CCCCCEEEECCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCC GEDSEIAATNNSTANLDVAHGGGGSDYIYGEGGSDVIFGGSGDDVIDGGEGNDGLRGGTG CCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCC HDTLKGGSGDDILIGGIGNDILTGGSDDDIFKFVDQGSGVRHGEKDTITDFTKGDDKIDI CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEH SDLLHTDSSDSINSLLQSSKIGISLEGADNMSTADLKLTVTDGGKTQEIILQDSAEQFDS HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEECCHHHHHH YITNGSISDVSGLLNDILKIYDN HHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2670940 [H]