| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709341
Identifier: 218709341
GI number: 218709341
Start: 1462097
End: 1462576
Strand: Direct
Name: 218709341
Synonym: VS_1350
Alternate gene names: NA
Gene position: 1462097-1462576 (Clockwise)
Preceding gene: 218709340
Following gene: 218709342
Centisome position: 44.32
GC content: 42.08
Gene sequence:
>480_bases ATGAATGTCACCTTAAGGGCCGCAAAGCACGCGGATTTGGAACAACTTAACGAGTTAATGTTCGATCTCCACCATCACCA CCACCTTGCAAGCCCAGAGCACTTTAAAACGGCAGAAGAGATTGAGCAGGAAAAAAGCATTGCACGTTACTTAGATGATC CTGAATGCTTAGTCTACGTGGCATTAAAAGGTGAGCTCATTGTTGGCTTTATCTCCGGACATTTTTGTGAGCTTATCTCA ACTGTGAGTAAACCGGTGCCGATGGGGAGTGTCGATGAACTGTTTGTCTTACCTGATTATCGAAAAGAATCAATTGCAGA AAAGTTGTTTAACAAAGTTGAAAGTACTTTTGATGATTATGGCGTTGAACAAGTCTTTGTAGAGGTTTGGGACTTTAATT CACCTGCCAAGGACTTCTATCAAAAAATGGGGTTCACACCTCACATTCAATGGATGAGGAAGGCTTTGCACAAAACGTAG
Upstream 100 bases:
>100_bases ACTTCAAACAATGAATTAATTCAATAACTTGTATAGATACTCACGCCAAGTAAACTAGACTCAGTTTAGATATTAATTTG GTTTGAGAAGCGCAATAGTC
Downstream 100 bases:
>100_bases ACAGCGATTTTGTGTGGCTTTGATTACAATAGACTCGTGTATTAGCAGTCTTAAATTTCTTCTATTATTTTTTAGGTAAA CTCGTTGGTTATTAGATATT
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase Family Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNVTLRAAKHADLEQLNELMFDLHHHHHLASPEHFKTAEEIEQEKSIARYLDDPECLVYVALKGELIVGFISGHFCELIS TVSKPVPMGSVDELFVLPDYRKESIAEKLFNKVESTFDDYGVEQVFVEVWDFNSPAKDFYQKMGFTPHIQWMRKALHKT
Sequences:
>Translated_159_residues MNVTLRAAKHADLEQLNELMFDLHHHHHLASPEHFKTAEEIEQEKSIARYLDDPECLVYVALKGELIVGFISGHFCELIS TVSKPVPMGSVDELFVLPDYRKESIAEKLFNKVESTFDDYGVEQVFVEVWDFNSPAKDFYQKMGFTPHIQWMRKALHKT >Mature_159_residues MNVTLRAAKHADLEQLNELMFDLHHHHHLASPEHFKTAEEIEQEKSIARYLDDPECLVYVALKGELIVGFISGHFCELIS TVSKPVPMGSVDELFVLPDYRKESIAEKLFNKVESTFDDYGVEQVFVEVWDFNSPAKDFYQKMGFTPHIQWMRKALHKT
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18437; Mature: 18437
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTLRAAKHADLEQLNELMFDLHHHHHLASPEHFKTAEEIEQEKSIARYLDDPECLVYV CCCEECCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE ALKGELIVGFISGHFCELISTVSKPVPMGSVDELFVLPDYRKESIAEKLFNKVESTFDDY EECCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHC GVEQVFVEVWDFNSPAKDFYQKMGFTPHIQWMRKALHKT CHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure MNVTLRAAKHADLEQLNELMFDLHHHHHLASPEHFKTAEEIEQEKSIARYLDDPECLVYV CCCEECCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE ALKGELIVGFISGHFCELISTVSKPVPMGSVDELFVLPDYRKESIAEKLFNKVESTFDDY EECCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHC GVEQVFVEVWDFNSPAKDFYQKMGFTPHIQWMRKALHKT CHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA