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The map label for this gene is arnT [H]

Identifier: 218709132

GI number: 218709132

Start: 1206035

End: 1207522

Strand: Direct

Name: arnT [H]

Synonym: VS_1139

Alternate gene names: 218709132

Gene position: 1206035-1207522 (Clockwise)

Preceding gene: 218709131

Following gene: 218709133

Centisome position: 36.55

GC content: 45.63

Gene sequence:

>1488_bases
ATGAGTCTGAACAGAACGCATCTATGGTATTTGTTGGCTTTTGCACTAGTTTTAAGGCTTTTATCTTTGGCGACTTATCC
GTTAATGGACACCACTGAAGCGCGCTATGGAGAAATGGCTCGCTTGATGGTAGAAACTGGCAATTGGTTAACCCCTCAGT
TTGATTACGGTATTCCTTTTTGGGGTAAGCCACCGTTGTTCACATGGATGAGTGCTGCTGGTATTGAGTTGTTCGGCTTG
AGTGAGTTTGCTGTGCGTGCTCCGCATTGGTTAGCAGGTTTCGCGACGATTCTATTGGTCGCGTATCTGGCGAAGCGTAC
GGGACAAAGTGCCTTAGTGGCGGCTGTTGTATTGGCAACATGTGGGATTTTCTCTATCGCCGCGGGTGCTGTGATGACCG
ACATGGCGTTAACGTTAGCCATGACCATCGCGATGCTGGGCTTTTACTTATGTTGGCTCGGTGGAGAAGACTGTAAAGGC
GAAGGAAGTGAGAGAACCAACAAAACCTGGGGTTACGTTGGATTTGTAGGCTTGGCGTTGGGCTTGCTTGCAAAAGGTCC
TGTTGCGATTGTGATCATGGGTATCGCAGTATTCCCTTGGTTGCTATTACAACATGGTATCTTTGGGGCTTTTAAAGTGT
TGTGGCAACGCTTTCCACTGTTGTCTGGTTTAGGTGTCATGCTGGCGATTGCCTTGCCTTGGTACATTATGGCTGAAATG
GCTACTCCGGGCTTTATTGATTATTTTATTGTTGGCGAACACTTTAAGCGTTTTGTTGTGAGTGGTTGGGAGGGCGATTT
ATACGGTTCTGCTCATGATGAAACCAGAGGCATGATCTGGGTGTTTTGGATTCAGGCCGCTGCGCCGTGGTCGATTGTAT
TACCTATTTTAACTTTCGCTCGTCGCAAGAAAATTGCGGAAATTAACGCTGAGAACAGTGGGTTGTTTTCATTCCTTGTC
TGTTGGTTGATTTCGCCACTGATTCTTTTCACTATGGCGGGCAATATTCTCCCTGCGTACGTACTGCCGGGGATTCCAGC
CCTTGGGATGCTGGTTGCTATACTTGTGGTAGAAAAAGATAAGAAGTGGTTCTCGAGCGTGGCTTTGGTTCTACCTGTGT
TGCTAATGATTGCGATGGTCTACCTGAATCTCGGAAAGGCGAACGAGAAAAGTGACCGTATTATTTTCGAACAGATTACG
GATTCTGCGCCAAGCTTTTACGTGGGTAAACGACCATTCTCTGGGCAATTTTACAGTCATGGTCAAGCGAAAAGACTTCT
CGATATCGAGCAGATAGATGGCATTGATAAGTTCTATCTGATTGGTAAAAGATCTGAAGTGGAAACCAAGATTAAAGAGA
ACGTATTAACGTGTATTCTAGAGCCAACGGTGAAAATAAAGCGTGCTTTGTTCAGCTGCCATCACCAGAGCAACACACCA
AATTTTTCGTTGAATCATATTGAAAGTGAAAATGATGTTCAGCGTTAA

Upstream 100 bases:

>100_bases
GTCGTATTTTCATCGAAACCAAGAATCGCCCTCTTTATCTGATCCAATCGGTCGTTGATACACCCGCATTGAAAACACAT
TTTAAATTAGAGGAATCAGC

Downstream 100 bases:

>100_bases
CTCAAGGCTACGAATGTTCAATGACAAGCTTCAATCACATAGCCAAAGACTACAGTCCCACCACAAGATGGTTCGATTTG
CTGTGGTTGGTGTTGGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSLNRTHLWYLLAFALVLRLLSLATYPLMDTTEARYGEMARLMVETGNWLTPQFDYGIPFWGKPPLFTWMSAAGIELFGL
SEFAVRAPHWLAGFATILLVAYLAKRTGQSALVAAVVLATCGIFSIAAGAVMTDMALTLAMTIAMLGFYLCWLGGEDCKG
EGSERTNKTWGYVGFVGLALGLLAKGPVAIVIMGIAVFPWLLLQHGIFGAFKVLWQRFPLLSGLGVMLAIALPWYIMAEM
ATPGFIDYFIVGEHFKRFVVSGWEGDLYGSAHDETRGMIWVFWIQAAAPWSIVLPILTFARRKKIAEINAENSGLFSFLV
CWLISPLILFTMAGNILPAYVLPGIPALGMLVAILVVEKDKKWFSSVALVLPVLLMIAMVYLNLGKANEKSDRIIFEQIT
DSAPSFYVGKRPFSGQFYSHGQAKRLLDIEQIDGIDKFYLIGKRSEVETKIKENVLTCILEPTVKIKRALFSCHHQSNTP
NFSLNHIESENDVQR

Sequences:

>Translated_495_residues
MSLNRTHLWYLLAFALVLRLLSLATYPLMDTTEARYGEMARLMVETGNWLTPQFDYGIPFWGKPPLFTWMSAAGIELFGL
SEFAVRAPHWLAGFATILLVAYLAKRTGQSALVAAVVLATCGIFSIAAGAVMTDMALTLAMTIAMLGFYLCWLGGEDCKG
EGSERTNKTWGYVGFVGLALGLLAKGPVAIVIMGIAVFPWLLLQHGIFGAFKVLWQRFPLLSGLGVMLAIALPWYIMAEM
ATPGFIDYFIVGEHFKRFVVSGWEGDLYGSAHDETRGMIWVFWIQAAAPWSIVLPILTFARRKKIAEINAENSGLFSFLV
CWLISPLILFTMAGNILPAYVLPGIPALGMLVAILVVEKDKKWFSSVALVLPVLLMIAMVYLNLGKANEKSDRIIFEQIT
DSAPSFYVGKRPFSGQFYSHGQAKRLLDIEQIDGIDKFYLIGKRSEVETKIKENVLTCILEPTVKIKRALFSCHHQSNTP
NFSLNHIESENDVQR
>Mature_494_residues
SLNRTHLWYLLAFALVLRLLSLATYPLMDTTEARYGEMARLMVETGNWLTPQFDYGIPFWGKPPLFTWMSAAGIELFGLS
EFAVRAPHWLAGFATILLVAYLAKRTGQSALVAAVVLATCGIFSIAAGAVMTDMALTLAMTIAMLGFYLCWLGGEDCKGE
GSERTNKTWGYVGFVGLALGLLAKGPVAIVIMGIAVFPWLLLQHGIFGAFKVLWQRFPLLSGLGVMLAIALPWYIMAEMA
TPGFIDYFIVGEHFKRFVVSGWEGDLYGSAHDETRGMIWVFWIQAAAPWSIVLPILTFARRKKIAEINAENSGLFSFLVC
WLISPLILFTMAGNILPAYVLPGIPALGMLVAILVVEKDKKWFSSVALVLPVLLMIAMVYLNLGKANEKSDRIIFEQITD
SAPSFYVGKRPFSGQFYSHGQAKRLLDIEQIDGIDKFYLIGKRSEVETKIKENVLTCILEPTVKIKRALFSCHHQSNTPN
FSLNHIESENDVQR

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=354, Percent_Identity=27.683615819209, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 55019; Mature: 54887

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNRTHLWYLLAFALVLRLLSLATYPLMDTTEARYGEMARLMVETGNWLTPQFDYGIPF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
WGKPPLFTWMSAAGIELFGLSEFAVRAPHWLAGFATILLVAYLAKRTGQSALVAAVVLAT
CCCCCHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
CGIFSIAAGAVMTDMALTLAMTIAMLGFYLCWLGGEDCKGEGSERTNKTWGYVGFVGLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GLLAKGPVAIVIMGIAVFPWLLLQHGIFGAFKVLWQRFPLLSGLGVMLAIALPWYIMAEM
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ATPGFIDYFIVGEHFKRFVVSGWEGDLYGSAHDETRGMIWVFWIQAAAPWSIVLPILTFA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH
RRKKIAEINAENSGLFSFLVCWLISPLILFTMAGNILPAYVLPGIPALGMLVAILVVEKD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCC
KKWFSSVALVLPVLLMIAMVYLNLGKANEKSDRIIFEQITDSAPSFYVGKRPFSGQFYSH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCCC
GQAKRLLDIEQIDGIDKFYLIGKRSEVETKIKENVLTCILEPTVKIKRALFSCHHQSNTP
CCHHHHCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
NFSLNHIESENDVQR
CCEECCCCCCCCCCC
>Mature Secondary Structure 
SLNRTHLWYLLAFALVLRLLSLATYPLMDTTEARYGEMARLMVETGNWLTPQFDYGIPF
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
WGKPPLFTWMSAAGIELFGLSEFAVRAPHWLAGFATILLVAYLAKRTGQSALVAAVVLAT
CCCCCHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
CGIFSIAAGAVMTDMALTLAMTIAMLGFYLCWLGGEDCKGEGSERTNKTWGYVGFVGLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GLLAKGPVAIVIMGIAVFPWLLLQHGIFGAFKVLWQRFPLLSGLGVMLAIALPWYIMAEM
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ATPGFIDYFIVGEHFKRFVVSGWEGDLYGSAHDETRGMIWVFWIQAAAPWSIVLPILTFA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH
RRKKIAEINAENSGLFSFLVCWLISPLILFTMAGNILPAYVLPGIPALGMLVAILVVEKD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCC
KKWFSSVALVLPVLLMIAMVYLNLGKANEKSDRIIFEQITDSAPSFYVGKRPFSGQFYSH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCCC
GQAKRLLDIEQIDGIDKFYLIGKRSEVETKIKENVLTCILEPTVKIKRALFSCHHQSNTP
CCHHHHCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
NFSLNHIESENDVQR
CCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA