Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708795
Identifier: 218708795
GI number: 218708795
Start: 815622
End: 816053
Strand: Direct
Name: 218708795
Synonym: VS_0794
Alternate gene names: NA
Gene position: 815622-816053 (Clockwise)
Preceding gene: 218708794
Following gene: 218708799
Centisome position: 24.72
GC content: 47.22
Gene sequence:
>432_bases ATGAAGAAGTTAATATTTGTTGTTGCCGCTTTATTGCTTGTCGGCTGCCAACCATTACAAAGCATGAGACCTAATGACTT TTTGGTTGCGGTTGGCTACGCGAGTGTCAGCGAGCAGAAAGGTCGTAATGACGAAGAGAAACGTATTCGAGCAATGAGAG CCTCTAAAATTGATGCGTATCGTGAACTTGCCGAGCAAGTGTATGGTATGCGCGTGAGTGGTCGAGCTGAGCTTGAAGAT CAGCGTCTTGGTACTGAGAGAACTTCAGGCGCGGTTGATGGTGTTATCCGTGGTGCCGAAGTGGTGCGCAGTTACCCTGT TGGCGACAGCTATGTGACTGAACTGCGGTTAGATATCCAAAAAATGGAACAACTGCGTAATTATGGCGAAGTTCAACCAG TGCCTGAGAAGAGACAACAAACGTTGTTCTAG
Upstream 100 bases:
>100_bases TACTCTGAACAGTATTCGAACTCAAGATGGGGTTATTATTCGTTCTGATCCAACGATCAGTCAGCCTCATACTGTTATTC TTCGCCCTTAGGAGTTCGTG
Downstream 100 bases:
>100_bases TTTAAGGATCGTCTAGTTATAGGTTTCTCCTGTTATATTGGCTGCTATTCGCTTTCCAGATGGCGTAACGGCAACCAGTA ACGGTTATGAATAAGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKKLIFVVAALLLVGCQPLQSMRPNDFLVAVGYASVSEQKGRNDEEKRIRAMRASKIDAYRELAEQVYGMRVSGRAELED QRLGTERTSGAVDGVIRGAEVVRSYPVGDSYVTELRLDIQKMEQLRNYGEVQPVPEKRQQTLF
Sequences:
>Translated_143_residues MKKLIFVVAALLLVGCQPLQSMRPNDFLVAVGYASVSEQKGRNDEEKRIRAMRASKIDAYRELAEQVYGMRVSGRAELED QRLGTERTSGAVDGVIRGAEVVRSYPVGDSYVTELRLDIQKMEQLRNYGEVQPVPEKRQQTLF >Mature_143_residues MKKLIFVVAALLLVGCQPLQSMRPNDFLVAVGYASVSEQKGRNDEEKRIRAMRASKIDAYRELAEQVYGMRVSGRAELED QRLGTERTSGAVDGVIRGAEVVRSYPVGDSYVTELRLDIQKMEQLRNYGEVQPVPEKRQQTLF
Specific function: Unknown
COG id: COG3018
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16165; Mature: 16165
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIFVVAALLLVGCQPLQSMRPNDFLVAVGYASVSEQKGRNDEEKRIRAMRASKIDAY CHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHH RELAEQVYGMRVSGRAELEDQRLGTERTSGAVDGVIRGAEVVRSYPVGDSYVTELRLDIQ HHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMEQLRNYGEVQPVPEKRQQTLF HHHHHHCCCCCCCCCHHHHCCCC >Mature Secondary Structure MKKLIFVVAALLLVGCQPLQSMRPNDFLVAVGYASVSEQKGRNDEEKRIRAMRASKIDAY CHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHH RELAEQVYGMRVSGRAELEDQRLGTERTSGAVDGVIRGAEVVRSYPVGDSYVTELRLDIQ HHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMEQLRNYGEVQPVPEKRQQTLF HHHHHHCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA