| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708689
Identifier: 218708689
GI number: 218708689
Start: 697234
End: 698223
Strand: Reverse
Name: 218708689
Synonym: VS_0668
Alternate gene names: NA
Gene position: 698223-697234 (Counterclockwise)
Preceding gene: 218708690
Following gene: 218708688
Centisome position: 21.16
GC content: 49.19
Gene sequence:
>990_bases ATGATGAACACTCAATTTAATGAATCGGTAACTCGCGTATTGGCAGAAATGAACTTCGACTCTTTAGAGCAAGCGAACCA ATACTGCAAAGCCCACAACGTTGATCCAAAAGCCTTGGTGATGGACACCCAGCCTATCGCTTTTGAAAGCGCTGCCGATG CTTATATCCTTGGTTCAGCACTGGCGCTATTTCGCAAAGCCACCAGCGCAGAACAAGCAGCGAATATCATTGGTGAAGGC CTTCAAGCATTCACCAAACCCGGCAGTGTTGCTGAGCAACGCCAGGTCGGTATTGGCCACGGTGCATTGGCTGCACGTCT TCTCAATGAAGAGAGTCACTGCTTTGCTTTCCTTGCGGGCCATGAATCTTTTGCTGCTGCAGAAGGTGCGATTAAAATCG CACTCAACGTCAACAAATCACGTCACAACCCATTGAAGGTAATACTCAATGGTCTAGGTAAAGATGCGGCTTACTTAATT TCTCGCATCAATGGTTTTACCTATGTTCGCACTCAATACGATTACCAAACGGGTGAGCTTGTTGAAACAGAACGCCGCCG CTTCTCACAAGGCCCTCGCGGAGAGATCTTGTGTTACGGCGCTGATGATGTACGTGAAGGCGTGGCAATCATGCACCGAG AAGAAGTGGATGTGAGTATTACGGGTAACTCAACTAACCCAACGCGCTTCCAACACCCTGTTGCAGGTATCTACAAAGCA GAACGTACTCGCCAAGGTTTACCTTACTTCTCAGTTGCTTCAGGCGGCGGTACAGGTAGAACATTGCACCCAGATAACGT GGCAGCAGGCCCTGCGTCTTACGGCATGACAGATACTATGGGTAGAATGCACGCTGATGCTCAGTTCGCAGGTAGCTCTT CTGTTCCTGCTCACGTGGCAATGATGGGCTTCATCGGTATGGGTAACAACCCTATGGTCGGTGCGACGGTTGCATTGGCT GTAGCAGTAAGCGAATATCAAAACGCATAA
Upstream 100 bases:
>100_bases AAGCTGCTGACCTTGCGACGGGGACTTATGGTCGCTTCGATGAAGCCGTTACCACCATTAACCCACGCCAACACTAATTT TGCCAATTTAGAGGAAAGAT
Downstream 100 bases:
>100_bases CGACAACGTTGAGCGCCACGATCTATCCATAGAATAGAGTCAGTTAACTGAGAAACAAGCAATAACAGACGACCAAAACT CTACACCTATCACTAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MMNTQFNESVTRVLAEMNFDSLEQANQYCKAHNVDPKALVMDTQPIAFESAADAYILGSALALFRKATSAEQAANIIGEG LQAFTKPGSVAEQRQVGIGHGALAARLLNEESHCFAFLAGHESFAAAEGAIKIALNVNKSRHNPLKVILNGLGKDAAYLI SRINGFTYVRTQYDYQTGELVETERRRFSQGPRGEILCYGADDVREGVAIMHREEVDVSITGNSTNPTRFQHPVAGIYKA ERTRQGLPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFIGMGNNPMVGATVALA VAVSEYQNA
Sequences:
>Translated_329_residues MMNTQFNESVTRVLAEMNFDSLEQANQYCKAHNVDPKALVMDTQPIAFESAADAYILGSALALFRKATSAEQAANIIGEG LQAFTKPGSVAEQRQVGIGHGALAARLLNEESHCFAFLAGHESFAAAEGAIKIALNVNKSRHNPLKVILNGLGKDAAYLI SRINGFTYVRTQYDYQTGELVETERRRFSQGPRGEILCYGADDVREGVAIMHREEVDVSITGNSTNPTRFQHPVAGIYKA ERTRQGLPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFIGMGNNPMVGATVALA VAVSEYQNA >Mature_329_residues MMNTQFNESVTRVLAEMNFDSLEQANQYCKAHNVDPKALVMDTQPIAFESAADAYILGSALALFRKATSAEQAANIIGEG LQAFTKPGSVAEQRQVGIGHGALAARLLNEESHCFAFLAGHESFAAAEGAIKIALNVNKSRHNPLKVILNGLGKDAAYLI SRINGFTYVRTQYDYQTGELVETERRRFSQGPRGEILCYGADDVREGVAIMHREEVDVSITGNSTNPTRFQHPVAGIYKA ERTRQGLPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVAMMGFIGMGNNPMVGATVALA VAVSEYQNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35209; Mature: 35209
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNTQFNESVTRVLAEMNFDSLEQANQYCKAHNVDPKALVMDTQPIAFESAADAYILGSA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCHHHHHHH LALFRKATSAEQAANIIGEGLQAFTKPGSVAEQRQVGIGHGALAARLLNEESHCFAFLAG HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEC HESFAAAEGAIKIALNVNKSRHNPLKVILNGLGKDAAYLISRINGFTYVRTQYDYQTGEL CCHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCHH VETERRRFSQGPRGEILCYGADDVREGVAIMHREEVDVSITGNSTNPTRFQHPVAGIYKA HHHHHHHHCCCCCCCEEEECCHHHHCCHHHEEECCEEEEEECCCCCCCCCCCCHHHHHHH ERTRQGLPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVA HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHH MMGFIGMGNNPMVGATVALAVAVSEYQNA HHHHEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMNTQFNESVTRVLAEMNFDSLEQANQYCKAHNVDPKALVMDTQPIAFESAADAYILGSA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCHHHHHHH LALFRKATSAEQAANIIGEGLQAFTKPGSVAEQRQVGIGHGALAARLLNEESHCFAFLAG HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEC HESFAAAEGAIKIALNVNKSRHNPLKVILNGLGKDAAYLISRINGFTYVRTQYDYQTGEL CCHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCHH VETERRRFSQGPRGEILCYGADDVREGVAIMHREEVDVSITGNSTNPTRFQHPVAGIYKA HHHHHHHHCCCCCCCEEEECCHHHHCCHHHEEECCEEEEEECCCCCCCCCCCCHHHHHHH ERTRQGLPYFSVASGGGTGRTLHPDNVAAGPASYGMTDTMGRMHADAQFAGSSSVPAHVA HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHH MMGFIGMGNNPMVGATVALAVAVSEYQNA HHHHEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA