Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is suhB [C]
Identifier: 218708626
GI number: 218708626
Start: 628181
End: 628984
Strand: Reverse
Name: suhB [C]
Synonym: VS_0604
Alternate gene names: 218708626
Gene position: 628984-628181 (Counterclockwise)
Preceding gene: 218708639
Following gene: 218708625
Centisome position: 19.06
GC content: 44.53
Gene sequence:
>804_bases ATGCATCCAATGCTAAACATTGCGATACGCGCTGCGCGTAAAGCTGGCAACCATATTGCTAAATCTCTAGAAACAACTGA TAAGATCGAATCGTCTCTAAAAGGTAACAACGATTACGTTACTAACATTGCTCAAGAAGCTGAGTACATGATCATTGAGA CAATCAAATCATCTTACCCAGAGCACAGCATTATTTCTGAAGAGTCAGGCCTAACTGAAGGTAAAGATTCTGACGTACAA TGGATCGTTGACCCACTAGATGGCACCAACAACTTTGTAAAAGGTTTCCCTCACTTCTCTGTATCTATCGCTGTTCGCAT GAACGGTCGTACAGAAGTTGCTTGTGTTTATGACCCAATGCTAAACGAGCTATTCACAGCTCAACGTGGCGCTGGCGCTC AACTTAACAACGCTCGTATGCGTGTTACTCAACTTAAAGACCTTCAAGGTACTGTTCTAGCGACTGGTTTCCCATTCAAG CAAAAACAACACTCTGAATCTTTCATGAAGATCATCTCTGGTCTATTCGTTGATTGTGCTGATTTCCGTCGTACTGGTTC TCCAGCTCTTGACCTATGTTACCTAGCAGCTGGCCGTGTTGACGGTTACCTAGAACTAGGCCTTAAGCCATGGGATCTAG CAGCTGGCGATCTAATCGCTCGTGAAGCTGGTGCTATCATGACTGACTTTGCTGGCGGCACTGATTACATGACGTCTGGT AATGTTGTTGCTTCAAGCGCGCGTGGTGTTAAGTCTATTCTTAAGCACGTTCGTGAGAACTCTAACGAAGGTATGCTGAA GTAA
Upstream 100 bases:
>100_bases AAATCAAGAGTTCAAAAAATAACCACTTCCCTTTTGGGGAAACTTTGGTATACTCGCCGCCGCTTTAAACTGTTCTTTAA CATCTTGTGGGAAAAACCAT
Downstream 100 bases:
>100_bases TTCAGACCTTGCGTTAATGCTCTTTAGTTAAGAGCAGAAGATTTTCAAAGCCTCGCTATTGCGAGGCTTTTTTGTATCCG AGATACGAGATACGAGATAC
Product: Inositol monophosphate family protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHPMLNIAIRAARKAGNHIAKSLETTDKIESSLKGNNDYVTNIAQEAEYMIIETIKSSYPEHSIISEESGLTEGKDSDVQ WIVDPLDGTNNFVKGFPHFSVSIAVRMNGRTEVACVYDPMLNELFTAQRGAGAQLNNARMRVTQLKDLQGTVLATGFPFK QKQHSESFMKIISGLFVDCADFRRTGSPALDLCYLAAGRVDGYLELGLKPWDLAAGDLIAREAGAIMTDFAGGTDYMTSG NVVASSARGVKSILKHVRENSNEGMLK
Sequences:
>Translated_267_residues MHPMLNIAIRAARKAGNHIAKSLETTDKIESSLKGNNDYVTNIAQEAEYMIIETIKSSYPEHSIISEESGLTEGKDSDVQ WIVDPLDGTNNFVKGFPHFSVSIAVRMNGRTEVACVYDPMLNELFTAQRGAGAQLNNARMRVTQLKDLQGTVLATGFPFK QKQHSESFMKIISGLFVDCADFRRTGSPALDLCYLAAGRVDGYLELGLKPWDLAAGDLIAREAGAIMTDFAGGTDYMTSG NVVASSARGVKSILKHVRENSNEGMLK >Mature_267_residues MHPMLNIAIRAARKAGNHIAKSLETTDKIESSLKGNNDYVTNIAQEAEYMIIETIKSSYPEHSIISEESGLTEGKDSDVQ WIVDPLDGTNNFVKGFPHFSVSIAVRMNGRTEVACVYDPMLNELFTAQRGAGAQLNNARMRVTQLKDLQGTVLATGFPFK QKQHSESFMKIISGLFVDCADFRRTGSPALDLCYLAAGRVDGYLELGLKPWDLAAGDLIAREAGAIMTDFAGGTDYMTSG NVVASSARGVKSILKHVRENSNEGMLK
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=253, Percent_Identity=32.4110671936759, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI221625487, Length=253, Percent_Identity=32.4110671936759, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI7657236, Length=262, Percent_Identity=33.969465648855, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI221625507, Length=145, Percent_Identity=36.551724137931, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1788882, Length=265, Percent_Identity=62.6415094339623, Blast_Score=370, Evalue=1e-104, Organism=Escherichia coli, GI1790659, Length=208, Percent_Identity=25.4807692307692, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193202572, Length=267, Percent_Identity=30.3370786516854, Blast_Score=128, Evalue=3e-30, Organism=Caenorhabditis elegans, GI193202570, Length=268, Percent_Identity=29.4776119402985, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320493, Length=238, Percent_Identity=33.6134453781513, Blast_Score=119, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6321836, Length=204, Percent_Identity=31.8627450980392, Blast_Score=102, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6324508, Length=348, Percent_Identity=24.4252873563218, Blast_Score=69, Evalue=7e-13, Organism=Drosophila melanogaster, GI21357329, Length=251, Percent_Identity=35.8565737051793, Blast_Score=145, Evalue=2e-35, Organism=Drosophila melanogaster, GI21357303, Length=252, Percent_Identity=32.5396825396825, Blast_Score=127, Evalue=6e-30, Organism=Drosophila melanogaster, GI24664922, Length=261, Percent_Identity=29.5019157088123, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24664926, Length=258, Percent_Identity=31.3953488372093, Blast_Score=124, Evalue=6e-29, Organism=Drosophila melanogaster, GI21357957, Length=274, Percent_Identity=29.1970802919708, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI24664918, Length=232, Percent_Identity=29.3103448275862, Blast_Score=108, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29126; Mature: 29126
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNIAIRAARKAGNHIAKSLETTDKIESSLKGNNDYVTNIAQEAEYMIIETIKSSYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC EHSIISEESGLTEGKDSDVQWIVDPLDGTNNFVKGFPHFSVSIAVRMNGRTEVACVYDPM CCHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCEEEEEEEEECCCEEEEEEECHH LNELFTAQRGAGAQLNNARMRVTQLKDLQGTVLATGFPFKQKQHSESFMKIISGLFVDCA HHHHHHHCCCCCCCCCCCEEEEHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DFRRTGSPALDLCYLAAGRVDGYLELGLKPWDLAAGDLIAREAGAIMTDFAGGTDYMTSG HHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCC NVVASSARGVKSILKHVRENSNEGMLK CEEEHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHPMLNIAIRAARKAGNHIAKSLETTDKIESSLKGNNDYVTNIAQEAEYMIIETIKSSYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC EHSIISEESGLTEGKDSDVQWIVDPLDGTNNFVKGFPHFSVSIAVRMNGRTEVACVYDPM CCHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCEEEEEEEEECCCEEEEEEECHH LNELFTAQRGAGAQLNNARMRVTQLKDLQGTVLATGFPFKQKQHSESFMKIISGLFVDCA HHHHHHHCCCCCCCCCCCEEEEHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DFRRTGSPALDLCYLAAGRVDGYLELGLKPWDLAAGDLIAREAGAIMTDFAGGTDYMTSG HHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCC NVVASSARGVKSILKHVRENSNEGMLK CEEEHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]