Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708625
Identifier: 218708625
GI number: 218708625
Start: 627844
End: 627993
Strand: Reverse
Name: 218708625
Synonym: VS_0603
Alternate gene names: NA
Gene position: 627993-627844 (Counterclockwise)
Preceding gene: 218708626
Following gene: 218708619
Centisome position: 19.03
GC content: 42.0
Gene sequence:
>150_bases TTGGCACTTGGCACTTGGCACTTGGCACTTGGTATTGGTATTGGCAAATACGACAATGTACAGTCGGTTCCAAAAGCTAA CCCACAATATACAGACATAAAAAAACCGCTAGTTGCCCAGCGGTTTTTTTGGTTTAGCGAAAGTTGTTAA
Upstream 100 bases:
>100_bases AGATACGAGATACGACCAAAATGTCGGTTAGTTACAGTGAGCACAAATCACTGCTCTGTAAGCTGTATTTAGATCGCCAC TAGATAGTGACTTAGCTACT
Downstream 100 bases:
>100_bases GCCGCGGCCTAAGGCATTTCGTCAAACTCTTCACCTTCTTTGTCCACTTGTGGTGGCATTAGGTGTTCACGCGTAATACC CAACTTCATAGCTAGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MALGTWHLALGIGIGKYDNVQSVPKANPQYTDIKKPLVAQRFFWFSESC
Sequences:
>Translated_49_residues MALGTWHLALGIGIGKYDNVQSVPKANPQYTDIKKPLVAQRFFWFSESC >Mature_48_residues ALGTWHLALGIGIGKYDNVQSVPKANPQYTDIKKPLVAQRFFWFSESC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5527; Mature: 5396
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGTWHLALGIGIGKYDNVQSVPKANPQYTDIKKPLVAQRFFWFSESC CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure ALGTWHLALGIGIGKYDNVQSVPKANPQYTDIKKPLVAQRFFWFSESC CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA