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The map label for this gene is yfhL [H]

Identifier: 218708599

GI number: 218708599

Start: 598115

End: 598369

Strand: Reverse

Name: yfhL [H]

Synonym: VS_0576

Alternate gene names: 218708599

Gene position: 598369-598115 (Counterclockwise)

Preceding gene: 218708600

Following gene: 218708593

Centisome position: 18.14

GC content: 39.61

Gene sequence:

>255_bases
ATGGCTCTACTAATAACTGACAAGTGCATAAACTGCGATATGTGTGACCCAGAATGCCCAAATGGTGCAATCACTATGGG
GGACAGTATCTTCGAAATCGATCCTGATTTATGTACTGAGTGTAAAGGTCACTATGAGAAGCCAACATGTCAGTCAGTAT
GTCCGATTACAAAATGTATCATTACTGACCCGAACCATATTGAAACTGACGACGAATTATTAGAAAAGTTTGTCATCATT
CAAGGCTTGACCTAA

Upstream 100 bases:

>100_bases
CAGATCTCGATCTAGAGTATGGCTTGCTAATGCGTAACTTGAGCGAAGGCCAAGATACACGTAACGCATCAGGTAAATAA
CGGTTACTTGGGAAAGATAA

Downstream 100 bases:

>100_bases
AAGATAAAAGGTTCAACTTAATCATCAAGTTGAACCTTTTTTTTAACCCGACTTTTCAATGGGATATATGTTACAGAACA
TCTCTTTCTCAAATTGATAT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MALLITDKCINCDMCDPECPNGAITMGDSIFEIDPDLCTECKGHYEKPTCQSVCPITKCIITDPNHIETDDELLEKFVII
QGLT

Sequences:

>Translated_84_residues
MALLITDKCINCDMCDPECPNGAITMGDSIFEIDPDLCTECKGHYEKPTCQSVCPITKCIITDPNHIETDDELLEKFVII
QGLT
>Mature_83_residues
ALLITDKCINCDMCDPECPNGAITMGDSIFEIDPDLCTECKGHYEKPTCQSVCPITKCIITDPNHIETDDELLEKFVIIQ
GLT

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=81, Percent_Identity=66.6666666666667, Blast_Score=119, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9309; Mature: 9178

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
14.3 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
13.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLITDKCINCDMCDPECPNGAITMGDSIFEIDPDLCTECKGHYEKPTCQSVCPITKCI
CEEEECCCCCCCCCCCCCCCCCEEEECCEEEEECHHHHHHHCCCCCCCCCCCCCCCEEEE
ITDPNHIETDDELLEKFVIIQGLT
ECCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALLITDKCINCDMCDPECPNGAITMGDSIFEIDPDLCTECKGHYEKPTCQSVCPITKCI
EEEECCCCCCCCCCCCCCCCCEEEECCEEEEECHHHHHHHCCCCCCCCCCCCCCCEEEE
ITDPNHIETDDELLEKFVIIQGLT
ECCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]