Click here to switch to the map view.

The map label for this gene is cstA [C]

Identifier: 218708576

GI number: 218708576

Start: 563946

End: 565439

Strand: Reverse

Name: cstA [C]

Synonym: VS_0542

Alternate gene names: 218708576

Gene position: 565439-563946 (Counterclockwise)

Preceding gene: 218708578

Following gene: 218708575

Centisome position: 17.14

GC content: 46.39

Gene sequence:

>1494_bases
ATGATGTGGTTTCTTACCTGTGTTGCAGCACTCATTGGTGGCTACTTTATTTACGGTGCCTTTATCGAAAAGATTTTCGG
TGTCAATGAAAAGCGTCAAACACCCGCTCACACCAAGCAAGACGGCGTGGACTACGTTCCAATGTCAACACCAAAGGTTT
ACCTAGTTCAGCTGCTTAACATTGCAGGTGTAGGTCCAATCTTCGGCCCTATCATGGGTGCTCTTTACGGCCCAGCAGCA
ATGCTTTGGATCGTTCTAGGTTGTATCTTCGCAGGTGCTGTACACGACTACTTCTCAGGTATGTTATCTATCCGTAATGG
TGGTGCTTCGGTTCCAACCATCACAGGACGTTACCTAGGCAATGGCGCAAAACACTTTATGAACATCTTTGCCATTGTTC
TACTGCTTCTTGTTGGTGTGGTATTCGTTTCTGCTCCAGCAGGCATGATCACTAACCTAGTGAATGACCAAACTGATTTC
GCGATGTCTGCAACAACGATGGTTGTTATCATATTTGCTTACTACATCATCGCAACGATTGTCCCTGTCGATAAAATCAT
TGGTCGCTTCTACCCACTGTTCGGTGCACTACTTATCTTTATGTCTGTTGGCCTAATCACTGCGATTGGTCTATCTGACG
AGCACCAAATCATGGGCGGCTTCGAGATGAAAGACATGTTCACCAACATGAACCCGAATGACCTACCACTTTGGCCTGCT
CTATTCATCACTATCGCTTGTGGTGCTATCTCTGGCTTCCACGCAACTCAGTCTCCTTTGATGGCGCGTTGTATGGAAAA
CGAGAAGAACGGTCGCTTCGTATTTTACGGTGCAATGATTGGTGAAGGCATCATCGCTCTAATCTGGTGTGCACTTGCTC
TGTCATTCTTCGGTTCAGTTGAATCTCTATCTGACGCGATTGCAAACGGCGGCCCTGGTAACGTGGTATACAGCGCTTCA
TTTGGCCTACTGGGTGTATTTGGCGGTATCCTTGCTTTCCTTGGCGTGGTTATCCTACCTATCACTTCTGGTGACACAGC
GTTCCGTTCAAGCCGTCTTATCCTTGCTGAATACTTCAACATGGAACAGAAAACACTGCGTAACCGACTACTAATGGCTC
TACCGCTATTCGTTCTTGGTGGCATCCTGACTCAAGTAGATTTCGGTATCATCTGGCGCTACTTCGGTTTTGCTAACCAA
TCAACAGCAGTCATGATGCTGTGGACAGCTTCGGCTTACCTACTTCGTCACAATAAACTGCACTGGGTAACAACGGTTCC
AGCTGTGTTCATGACTTCTGTGTGTATTACATTCATCCTGAACAACAGTCAGCTAGGCTTCGGTCTGCCAATGCAGCTTT
CAACCATCATCGGCGTAGTGAGTGCATTCGGTATCGCAGCTTACGTTATCAAAATTTCAAAAGGCAAAGGCGATATCGAC
CTTGATGATGAAGAATCAGAAAAGGAAGCAAAGCCCGTAACAAAAACAGCTTAG

Upstream 100 bases:

>100_bases
ATTAGCTATTCGACCACTCACTCCAGTAGCGGAAGTTTCTTCTCATACACTCCTTTAATATACACCCTGACTTAATTAAT
ACATTCAGGGATAACAAATT

Downstream 100 bases:

>100_bases
CTTTCCCCGAAACATTCTCACTCTTCATAGAAAGAGGAGAATAAGAAAGCCAAAAACACTTCGCTTGTTCCACCACATCT
TTGATGAACTGGAATCTAAG

Product: Carbon starvation protein CstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MMWFLTCVAALIGGYFIYGAFIEKIFGVNEKRQTPAHTKQDGVDYVPMSTPKVYLVQLLNIAGVGPIFGPIMGALYGPAA
MLWIVLGCIFAGAVHDYFSGMLSIRNGGASVPTITGRYLGNGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLVNDQTDF
AMSATTMVVIIFAYYIIATIVPVDKIIGRFYPLFGALLIFMSVGLITAIGLSDEHQIMGGFEMKDMFTNMNPNDLPLWPA
LFITIACGAISGFHATQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCALALSFFGSVESLSDAIANGGPGNVVYSAS
FGLLGVFGGILAFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLRNRLLMALPLFVLGGILTQVDFGIIWRYFGFANQ
STAVMMLWTASAYLLRHNKLHWVTTVPAVFMTSVCITFILNNSQLGFGLPMQLSTIIGVVSAFGIAAYVIKISKGKGDID
LDDEESEKEAKPVTKTA

Sequences:

>Translated_497_residues
MMWFLTCVAALIGGYFIYGAFIEKIFGVNEKRQTPAHTKQDGVDYVPMSTPKVYLVQLLNIAGVGPIFGPIMGALYGPAA
MLWIVLGCIFAGAVHDYFSGMLSIRNGGASVPTITGRYLGNGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLVNDQTDF
AMSATTMVVIIFAYYIIATIVPVDKIIGRFYPLFGALLIFMSVGLITAIGLSDEHQIMGGFEMKDMFTNMNPNDLPLWPA
LFITIACGAISGFHATQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCALALSFFGSVESLSDAIANGGPGNVVYSAS
FGLLGVFGGILAFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLRNRLLMALPLFVLGGILTQVDFGIIWRYFGFANQ
STAVMMLWTASAYLLRHNKLHWVTTVPAVFMTSVCITFILNNSQLGFGLPMQLSTIIGVVSAFGIAAYVIKISKGKGDID
LDDEESEKEAKPVTKTA
>Mature_497_residues
MMWFLTCVAALIGGYFIYGAFIEKIFGVNEKRQTPAHTKQDGVDYVPMSTPKVYLVQLLNIAGVGPIFGPIMGALYGPAA
MLWIVLGCIFAGAVHDYFSGMLSIRNGGASVPTITGRYLGNGAKHFMNIFAIVLLLLVGVVFVSAPAGMITNLVNDQTDF
AMSATTMVVIIFAYYIIATIVPVDKIIGRFYPLFGALLIFMSVGLITAIGLSDEHQIMGGFEMKDMFTNMNPNDLPLWPA
LFITIACGAISGFHATQSPLMARCMENEKNGRFVFYGAMIGEGIIALIWCALALSFFGSVESLSDAIANGGPGNVVYSAS
FGLLGVFGGILAFLGVVILPITSGDTAFRSSRLILAEYFNMEQKTLRNRLLMALPLFVLGGILTQVDFGIIWRYFGFANQ
STAVMMLWTASAYLLRHNKLHWVTTVPAVFMTSVCITFILNNSQLGFGLPMQLSTIIGVVSAFGIAAYVIKISKGKGDID
LDDEESEKEAKPVTKTA

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=555, Percent_Identity=24.8648648648649, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87082431, Length=351, Percent_Identity=26.7806267806268, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 53725; Mature: 53725

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHCCCCCCCC
>Mature Secondary Structure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CCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]