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The map label for this gene is 218708524

Identifier: 218708524

GI number: 218708524

Start: 511987

End: 512259

Strand: Reverse

Name: 218708524

Synonym: VS_0489

Alternate gene names: NA

Gene position: 512259-511987 (Counterclockwise)

Preceding gene: 218708525

Following gene: 218708523

Centisome position: 15.53

GC content: 44.69

Gene sequence:

>273_bases
TTGCTCGATATATCTCGCCAGTGTGTCTATCAGAGAGAAAATCGTGAGGCACTTCGTCAGGCTGAACTTGCTCCTGTGAA
AGAAACTGCCCTTGAATTAAGGCATTTGATTCCTCGGCTAGGAACTCGCAAGATCCATTTCTTATTGAAACCTAATCTGA
TAGCTAAGGAAATAAAGCTTGGGCGTGATGCTTTGTTTGATTACCTCAGGGAAGAACGCTTACTCGTTAAGCCGAAACGG
AGTTGCACCAAAACAACGAACAGCAGGCACTGA

Upstream 100 bases:

>100_bases
TTGACGCTGAGCATGGGATGTCGCTAAGAAAAAAGTATATTGCGAAGGAGCAAGAAGCCTTCAGAAGGAGAGGAAAGTAA
GCTTAAGTAAAGCTTTCTCA

Downstream 100 bases:

>100_bases
ATGAAAAACACCCGAACTTGTTAAAAGAAGTCGTTCAGTCAAAACTAGAAGAGATTCTGGTGAGCGACATCACTTATGTT
CATCAGTCGTAACCACTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Transposase; Transposase For Insertion Element IS; Transposase OrfB; ISPsy11 Transposase OrfB; Integrase

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MLDISRQCVYQRENREALRQAELAPVKETALELRHLIPRLGTRKIHFLLKPNLIAKEIKLGRDALFDYLREERLLVKPKR
SCTKTTNSRH

Sequences:

>Translated_90_residues
MLDISRQCVYQRENREALRQAELAPVKETALELRHLIPRLGTRKIHFLLKPNLIAKEIKLGRDALFDYLREERLLVKPKR
SCTKTTNSRH
>Mature_90_residues
MLDISRQCVYQRENREALRQAELAPVKETALELRHLIPRLGTRKIHFLLKPNLIAKEIKLGRDALFDYLREERLLVKPKR
SCTKTTNSRH

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10649; Mature: 10649

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDISRQCVYQRENREALRQAELAPVKETALELRHLIPRLGTRKIHFLLKPNLIAKEIKL
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHC
GRDALFDYLREERLLVKPKRSCTKTTNSRH
CHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MLDISRQCVYQRENREALRQAELAPVKETALELRHLIPRLGTRKIHFLLKPNLIAKEIKL
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHC
GRDALFDYLREERLLVKPKRSCTKTTNSRH
CHHHHHHHHHHCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA