| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is mtnN
Identifier: 218708504
GI number: 218708504
Start: 483617
End: 484312
Strand: Reverse
Name: mtnN
Synonym: VS_0468
Alternate gene names: 218708504
Gene position: 484312-483617 (Counterclockwise)
Preceding gene: 218708505
Following gene: 218708503
Centisome position: 14.68
GC content: 45.98
Gene sequence:
>696_bases ATGAAAATCGGCATCATTGGCGCAATGGAGCAAGAAGTTGCGATCCTAAAAGCAGCAATTTCAGACATTACTGAAGTTAA TAAAGGCGGTTGTACCTTTTTCTCTGGTCAGCTAAATGGTGTTGACGTTGTTTTGCTTCAATCAGGCATTGGTAAAGTAG CAGCGGCTGTTGGTACTTCAATCCTGCTAAGCGAATACCAACCAGATGTAGTATTAAATACTGGCTCTGCTGGCGGTTTT GATTCAACACTGAACCTTGGCGATGTGGTTATCTCTACTGAAGTTCGTCACCACGATGCTGACGTTACAGCTTTCGGTTA CGAAATTGGCCAAATGGCAGGTCAACCAGCAGCGTTCAAAGCTGACGACAAACTGATGGCTGTTGCTGAACAAGCGCTAG CACAAATGGAAGATAAGCATGCCGTTCGCGGTCTTATCTGTACTGGCGACGCATTTGTTTGCACAGCAGAACGTCAAGAG TTCATCCGCAAGCACTTCCCATCTGTCGTTGCTGTAGAGATGGAAGCATCGGCTATCGCTCAAGCTTGTCACCAATTCCA AGTACCATTCGTGGTTGTTCGTGCAATCTCTGACGTTGCAGACAAAGAATCACCAATGAGCTTCGAAGAGTTCCTGCCAC TAGCAGCGCAAAGCTCTTCTGAAATGGTTATCAAGATGGTTGCCCTACTAAAGTAA
Upstream 100 bases:
>100_bases GTATTCGGATGAGAAGTGCTTCTGGGCAGTCGCTCGACACTTCTCTTCCATGCTACAATTTCGCTCTACTGTTTAAATAA TTTTTATTAAGAGACTACAC
Downstream 100 bases:
>100_bases GCGACTAGACATGCAAACACTGTTTGATCAGGTATTTGCAAATGGCGTGCTCCTTGTGATGTGGGGAGCACTGCTTTTTC ATTTAATTTTACCTATCCCC
Product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKIGIIGAMEQEVAILKAAISDITEVNKGGCTFFSGQLNGVDVVLLQSGIGKVAAAVGTSILLSEYQPDVVLNTGSAGGF DSTLNLGDVVISTEVRHHDADVTAFGYEIGQMAGQPAAFKADDKLMAVAEQALAQMEDKHAVRGLICTGDAFVCTAERQE FIRKHFPSVVAVEMEASAIAQACHQFQVPFVVVRAISDVADKESPMSFEEFLPLAAQSSSEMVIKMVALLK
Sequences:
>Translated_231_residues MKIGIIGAMEQEVAILKAAISDITEVNKGGCTFFSGQLNGVDVVLLQSGIGKVAAAVGTSILLSEYQPDVVLNTGSAGGF DSTLNLGDVVISTEVRHHDADVTAFGYEIGQMAGQPAAFKADDKLMAVAEQALAQMEDKHAVRGLICTGDAFVCTAERQE FIRKHFPSVVAVEMEASAIAQACHQFQVPFVVVRAISDVADKESPMSFEEFLPLAAQSSSEMVIKMVALLK >Mature_231_residues MKIGIIGAMEQEVAILKAAISDITEVNKGGCTFFSGQLNGVDVVLLQSGIGKVAAAVGTSILLSEYQPDVVLNTGSAGGF DSTLNLGDVVISTEVRHHDADVTAFGYEIGQMAGQPAAFKADDKLMAVAEQALAQMEDKHAVRGLICTGDAFVCTAERQE FIRKHFPSVVAVEMEASAIAQACHQFQVPFVVVRAISDVADKESPMSFEEFLPLAAQSSSEMVIKMVALLK
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily
Homologues:
Organism=Escherichia coli, GI1786354, Length=230, Percent_Identity=57.8260869565217, Blast_Score=246, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTNN_VIBSL (B7VJ21)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002416125.1 - GeneID: 7160103 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_0468 - HOGENOM: HBG367723 - OMA: AMEQEVT - ProtClustDB: PRK05584 - HAMAP: MF_01684 - InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 - PANTHER: PTHR21234 - TIGRFAMs: TIGR01704
Pfam domain/function: PF01048 PNP_UDP_1
EC number: =3.2.2.9
Molecular weight: Translated: 24466; Mature: 24466
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: ACT_SITE 12-12 BINDING 78-78 BINDING 198-198
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIIGAMEQEVAILKAAISDITEVNKGGCTFFSGQLNGVDVVLLQSGIGKVAAAVGTS CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEHHCCHHHHHHHHHH ILLSEYQPDVVLNTGSAGGFDSTLNLGDVVISTEVRHHDADVTAFGYEIGQMAGQPAAFK HHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCCEEEHHHHHHHHCCCCCCCC ADDKLMAVAEQALAQMEDKHAVRGLICTGDAFVCTAERQEFIRKHFPSVVAVEMEASAIA CCHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEHHHHHHHHHHCCCEEEEEHHHHHHH QACHQFQVPFVVVRAISDVADKESPMSFEEFLPLAAQSSSEMVIKMVALLK HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MKIGIIGAMEQEVAILKAAISDITEVNKGGCTFFSGQLNGVDVVLLQSGIGKVAAAVGTS CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEHHCCHHHHHHHHHH ILLSEYQPDVVLNTGSAGGFDSTLNLGDVVISTEVRHHDADVTAFGYEIGQMAGQPAAFK HHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCCEEEHHHHHHHHCCCCCCCC ADDKLMAVAEQALAQMEDKHAVRGLICTGDAFVCTAERQEFIRKHFPSVVAVEMEASAIA CCHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEHHHHHHHHHHCCCEEEEEHHHHHHH QACHQFQVPFVVVRAISDVADKESPMSFEEFLPLAAQSSSEMVIKMVALLK HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA