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The map label for this gene is yraP [C]

Identifier: 218708473

GI number: 218708473

Start: 446352

End: 446957

Strand: Reverse

Name: yraP [C]

Synonym: VS_0436

Alternate gene names: 218708473

Gene position: 446957-446352 (Counterclockwise)

Preceding gene: 218708474

Following gene: 218708464

Centisome position: 13.55

GC content: 43.07

Gene sequence:

>606_bases
ATGAAATCATTAACTTCTATGAAGCTGCTTAAGCTGATTAGTGTTTCGCTACTTACACTGTCGTTATCTGGTTGTGCTGG
TCTTTTCATTGCTGGTGCAGCAACTACTGCAAATCTAGTCACAGATACACGAACCACCAAAGAGATTTGGAGCGACAACA
ATATCGAATTTGAAGTTGCAGCTATGACAAATAAACCGCCATTTCGCGGCAATGTCAGTATCACAGCAAGCTCTTACCGT
GGTTCAGTAGTTCTGATGGGGCAAGCAACGACAGATGCTGAACGTCGTGCTTTTGAAAGCCAAGCTAAAGCAGTAACGGG
AGTTGAAAGTATACACAACCAGATCCGAGTGAAAGAGCCACTGTCTGTTAGTGCTATCAGCAAAGACAGTTGGATTACCA
CTAAAGTGAAGTCTGCCCTACTTGCCAAGTCTGAGCTTAACGGTATCAAAGTCAAAGTCATTACTGAAGATTCAGAAGTA
TTTCTGCTTGGATTAGTTTCTCGAGAACACGCTGATATCGCGACAGAAGTTGCGCGTAATATCTCTGGTGTGAAGCAGGT
GATTCGAGCGTTTGAATATGGTGAAGAAGACGCTTCTGTAAACTAA

Upstream 100 bases:

>100_bases
CGTATCCACGAAGTACACATGGTGACACTACACTGCTTATGTGACCTAATCGATCAAGTACTCTTCCCAGCTCACGAAGA
GTGATATACGGAGCATCACG

Downstream 100 bases:

>100_bases
CTTACTTTGAATTTACTTAGACAAGTTAGCTGCTTATTAGCTGGTTGGTTGGCTGGTAAAGCCTAACGAAATGAATCAGA
TTAATAAAAGTCAGTTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKSLTSMKLLKLISVSLLTLSLSGCAGLFIAGAATTANLVTDTRTTKEIWSDNNIEFEVAAMTNKPPFRGNVSITASSYR
GSVVLMGQATTDAERRAFESQAKAVTGVESIHNQIRVKEPLSVSAISKDSWITTKVKSALLAKSELNGIKVKVITEDSEV
FLLGLVSREHADIATEVARNISGVKQVIRAFEYGEEDASVN

Sequences:

>Translated_201_residues
MKSLTSMKLLKLISVSLLTLSLSGCAGLFIAGAATTANLVTDTRTTKEIWSDNNIEFEVAAMTNKPPFRGNVSITASSYR
GSVVLMGQATTDAERRAFESQAKAVTGVESIHNQIRVKEPLSVSAISKDSWITTKVKSALLAKSELNGIKVKVITEDSEV
FLLGLVSREHADIATEVARNISGVKQVIRAFEYGEEDASVN
>Mature_201_residues
MKSLTSMKLLKLISVSLLTLSLSGCAGLFIAGAATTANLVTDTRTTKEIWSDNNIEFEVAAMTNKPPFRGNVSITASSYR
GSVVLMGQATTDAERRAFESQAKAVTGVESIHNQIRVKEPLSVSAISKDSWITTKVKSALLAKSELNGIKVKVITEDSEV
FLLGLVSREHADIATEVARNISGVKQVIRAFEYGEEDASVN

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=190, Percent_Identity=36.3157894736842, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 21622; Mature: 21622

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTSMKLLKLISVSLLTLSLSGCAGLFIAGAATTANLVTDTRTTKEIWSDNNIEFEVA
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHCCCCEEEEEE
AMTNKPPFRGNVSITASSYRGSVVLMGQATTDAERRAFESQAKAVTGVESIHNQIRVKEP
EECCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCC
LSVSAISKDSWITTKVKSALLAKSELNGIKVKVITEDSEVFLLGLVSREHADIATEVARN
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHH
ISGVKQVIRAFEYGEEDASVN
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSLTSMKLLKLISVSLLTLSLSGCAGLFIAGAATTANLVTDTRTTKEIWSDNNIEFEVA
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCHHHHHHCCCCEEEEEE
AMTNKPPFRGNVSITASSYRGSVVLMGQATTDAERRAFESQAKAVTGVESIHNQIRVKEP
EECCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCC
LSVSAISKDSWITTKVKSALLAKSELNGIKVKVITEDSEVFLLGLVSREHADIATEVARN
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHH
ISGVKQVIRAFEYGEEDASVN
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]